Pre_GI: BLASTN Hits

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Query: NC_004463:18497 Bradyrhizobium japonicum USDA 110, complete genome

Start: 18497, End: 46265, Length: 27769

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome0835BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome2e-158567BLASTN svgBLASTP svg
NC_007643:95536295536297459919238Rhodospirillum rubrum ATCC 11170, complete genome4e-98367BLASTN svgBLASTP svg
NC_009668:445134*44513451474969616Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence7e-63250BLASTN svgBLASTP svg
NC_009720:62226262226265580233541Xanthobacter autotrophicus Py2, complete genome5e-42180BLASTN svgBLASTP svg
NC_007925:39337653933765395524721483Rhodopseudomonas palustris BisB18, complete genome3e-37165BLASTN svgBLASTP svg
NC_010943:20911992091199211510023902Stenotrophomonas maltophilia K279a, complete genome1e-36163BLASTN svgBLASTP svg
NC_003295:27873712787371282580238432Ralstonia solanacearum GMI1000, complete genome5e-36161BLASTN svgBLASTP svg
NC_011992:37528673752867377559922733Acidovorax ebreus TPSY, complete genome7e-35157BLASTN svgBLASTP svg
NC_018691:30820003082000310649724498Alcanivorax dieselolei B5 chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_014910:29308602930860295129320434Alicycliphilus denitrificans BC chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_008686:14728991472899150063527737Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-26129BLASTN svgBLASTP svg
NC_014100:2782000*2782000280425722258Caulobacter segnis ATCC 21756 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome2e-20109BLASTN svgBLASTP svg
NC_019973:5838000*5838000586259924600Mesorhizobium australicum WSM2073, complete genome6e-20107BLASTN svgBLASTP svg
NC_015675:64640006464000648809924100Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_014923:59090005909000593359924600Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete6e-20107BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome1e-18103BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014414:25401892540189256130021112Parvularcula bermudensis HTCC2503 chromosome, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_018691:30418513041851306454422694Alcanivorax dieselolei B5 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_013209:2582878*2582878262254039663Acetobacter pasteurianus IFO 3283-01, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008752:72518972518977609450906Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_011059:670345*67034569409923755Prosthecochloris aestuarii DSM 271, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010125:2998619*2998619302523726619Gluconacetobacter diazotrophicus PAl 5, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013173:12598981259898129609936202Desulfomicrobium baculatum DSM 4028, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_006526:19767791976779202212445346Zymomonas mobilis subsp. mobilis ZM4, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_004463:21180002118000214009922100Bradyrhizobium japonicum USDA 110, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_011892:779757797512040642432Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete4e-1281.8BLASTN svgBLASTP svg
NC_008825:12585001258500129286934370Methylibium petroleiphilum PM1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008826:17060917060919782727219Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009720:33176423317642334276225121Xanthobacter autotrophicus Py2, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_010338:41082804108280413892530646Caulobacter sp. K31, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013857:478000*47800050109923100Azospirillum sp. B510 plasmid pAB510c, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_013854:513196*51319653916325968Azospirillum sp. B510, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011982:130199*13019915067320475Agrobacterium vitis S4 plasmid pTiS4, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_010170:22469932246993226783320841Bordetella petrii, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007404:35976435976438550125738Thiobacillus denitrificans ATCC 25259, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008577:14550001455000148935334354Shewanella sp. ANA-3 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010725:33150073315007334271327707Methylobacterium populi BJ001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012560:36671773667177369462427448Azotobacter vinelandii DJ, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021150:36671763667176369462327448Azotobacter vinelandii CA6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010125:38171138171140405422344Gluconacetobacter diazotrophicus PAl 5, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome3e-0661.9BLASTN svgBLASTP svg