Pre_GI: BLASTN Hits

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Query: NC_004463:1772541 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1772541, End: 1797099, Length: 24559

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020453:93639693639697628939894Agromonas oligotrophica S58 DNA, complete genome5e-119436BLASTN svgBLASTP svg
NC_010524:67421667421670822934014Leptothrix cholodnii SP-6, complete genome2e-66262BLASTN svgBLASTP svg
NC_010524:25308412530841255411423274Leptothrix cholodnii SP-6, complete genome2e-66262BLASTN svgBLASTP svg
NC_011894:63826366382636641559932964Methylobacterium nodulans ORS 2060, complete genome1e-57232BLASTN svgBLASTP svg
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome5e-57230BLASTN svgBLASTP svg
NC_014100:533322*53332256190028579Caulobacter segnis ATCC 21756 chromosome, complete genome5e-57230BLASTN svgBLASTP svg
NC_002977:11984381198438121974121304Methylococcus capsulatus str. Bath, complete genome3e-55224BLASTN svgBLASTP svg
NC_009720:75061275061278422333612Xanthobacter autotrophicus Py2, complete genome8e-53216BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome8e-50206BLASTN svgBLASTP svg
NC_008702:39280433928043395047222430Azoarcus sp. BH72, complete genome5e-48200BLASTN svgBLASTP svg
NC_009720:81315781315783515121995Xanthobacter autotrophicus Py2, complete genome5e-48200BLASTN svgBLASTP svg
NC_005070:41926141926147386554605Synechococcus sp. WH 8102, complete genome2e-44188BLASTN svgBLASTP svg
NC_010725:33150073315007334271327707Methylobacterium populi BJ001, complete genome5e-42180BLASTN svgBLASTP svg
NC_007489:42500425006678724288Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence4e-39170BLASTN svgBLASTP svg
NC_013173:36793263679326373266253337Desulfomicrobium baculatum DSM 4028, complete genome2e-38168BLASTN svgBLASTP svg
NC_007517:1468719*1468719150798939271Geobacter metallireducens GS-15, complete genome4e-36161BLASTN svgBLASTP svg
NC_008825:28899332889933292316233230Methylibium petroleiphilum PM1, complete genome7e-35157BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome3e-34155BLASTN svgBLASTP svg
NC_009720:33176423317642334276225121Xanthobacter autotrophicus Py2, complete genome3e-34155BLASTN svgBLASTP svg
NC_008686:14393281439328146928729960Paracoccus denitrificans PD1222 chromosome 1, complete sequence3e-34155BLASTN svgBLASTP svg
NC_008254:53459053459055841423825Mesorhizobium sp. BNC1, complete genome4e-33151BLASTN svgBLASTP svg
NC_009668:52917552917554876219588Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence4e-33151BLASTN svgBLASTP svg
NC_011145:49609404960940498025219313Anaeromyxobacter sp. K, complete genome2e-31145BLASTN svgBLASTP svg
NC_015138:10160001016000103760521606Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-30143BLASTN svgBLASTP svg
NC_013173:2884887*2884887293159946713Desulfomicrobium baculatum DSM 4028, complete genome1e-30143BLASTN svgBLASTP svg
NC_009937:43921084392108441736925262Azorhizobium caulinodans ORS 571, complete genome2e-29139BLASTN svgBLASTP svg
NC_010067:80712980712983359926471Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete6e-29137BLASTN svgBLASTP svg
NC_011901:2202690*2202690223230229613Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-28135BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome1e-27133BLASTN svgBLASTP svg
NC_008781:3365468*3365468340127235805Polaromonas naphthalenivorans CJ2, complete genome4e-27131BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome4e-24121BLASTN svgBLASTP svg
NC_007760:49111814911181493806026880Anaeromyxobacter dehalogenans 2CP-C, complete genome4e-24121BLASTN svgBLASTP svg
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome1e-23119BLASTN svgBLASTP svg
NC_015125:24439452443945246359819654Microbacterium testaceum StLB037, complete genome3e-21111BLASTN svgBLASTP svg
NC_010338:41486674148667417175123085Caulobacter sp. K31, complete genome3e-21111BLASTN svgBLASTP svg
NC_011740:21351412135141215307917939Escherichia fergusonii ATCC 35469, complete genome5e-20107BLASTN svgBLASTP svg
NC_011883:48718748718751019523009Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,1e-1799.6BLASTN svgBLASTP svg
NC_011894:6418000*6418000644309925100Methylobacterium nodulans ORS 2060, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015976:10648881064888109285227965Sphingobium sp. SYK-6, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014664:26695622669562269113921578Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_011886:2950411*2950411298659936189Arthrobacter chlorophenolicus A6, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014933:32510003251000327098419985Bacteroides helcogenes P 36-108 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011992:57100057100058859917600Acidovorax ebreus TPSY, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012691:22250002225000224630921310Tolumonas auensis DSM 9187, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009937:53082530827690623825Azorhizobium caulinodans ORS 571, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009668:445134*44513451474969616Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_007761:781210*78121081014728938Rhizobium etli CFN 42, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008268:5781604*5781604581424432641Rhodococcus sp. RHA1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010725:3273261*3273261329669423434Methylobacterium populi BJ001, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014963:55800055800058218424185Terriglobus saanensis SP1PR4 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008254:61143761143762981918383Mesorhizobium sp. BNC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015145:2942500*2942500296157319074Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014394:13736021373602140662533024Gallionella capsiferriformans ES-2 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012560:5276000*5276000530340327404Azotobacter vinelandii DJ, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_021150:5234000*5234000526129527296Azotobacter vinelandii CA6, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_000962:16840051684005170853924535Mycobacterium tuberculosis H37Rv, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009525:16855221685522171115225631Mycobacterium tuberculosis H37Ra, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009565:16886421688642171216323522Mycobacterium tuberculosis F11, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015848:17081761708176173271724542Mycobacterium canettii CIPT 140010059, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019950:16899101689910171687926970Mycobacterium canettii CIPT 140060008 complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002755:16841611684161170880524645Mycobacterium tuberculosis CDC1551, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008609:3732192*3732192377050638315Pelobacter propionicus DSM 2379, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010725:5491491*5491491552462633136Methylobacterium populi BJ001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010125:10114301011430103468823259Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008313:31124403112440314759935160Ralstonia eutropha H16 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_011979:2352961*2352961238357030610Geobacter sp. FRC-32, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011206:25491322549132259129842167Acidithiobacillus ferrooxidans ATCC 53993, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008757:770237702310503328011Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete7e-0763.9BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010125:28136532813653283723423582Gluconacetobacter diazotrophicus PAl 5, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014923:58680005868000589378125782Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_015675:64230006423000644845225453Mesorhizobium opportunistum WSM2075 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019973:57970005797000582274125742Mesorhizobium australicum WSM2073, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015376:36313923631392365107419683Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-0661.9BLASTN svgBLASTP svg
NC_011769:34013533401353342520623854Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008343:2589680*2589680261333023651Granulibacter bethesdensis CGDNIH1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007086:42934054293405431133917935Xanthomonas campestris pv. campestris str. 8004, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0661.9BLASTN svgBLASTP svg