Pre_GI: BLASTN Hits

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Query: NC_004463:1749000 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1749000, End: 1768599, Length: 19600

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome02668BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome01923BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01653BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome01618BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome01612BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome8e-31143BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome8e-31143BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome1e-23119BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012587:2326000*2326000234764221643Rhizobium sp. NGR234, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-1489.7BLASTN svgBLASTP svg
NC_003047:2477810*2477810250031722508Sinorhizobium meliloti 1021, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007761:3047321*3047321306564218322Rhizobium etli CFN 42, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_012724:31004303100430312207221643Burkholderia glumae BGR1 chromosome 1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete4e-1177.8BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015376:32497733249773327345123679Burkholderia gladioli BSR3 chromosome chromosome 2, complete9e-0969.9BLASTN svgBLASTP svg
NC_013194:16311341631134166791036777Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete9e-0969.9BLASTN svgBLASTP svg
NC_007964:36384153638415366224323829Nitrobacter hamburgensis X14, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007406:33540003354000337855624557Nitrobacter winogradskyi Nb-255, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007298:17598811759881180860548725Dechloromonas aromatica RCB, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007298:1824335*1824335184843524101Dechloromonas aromatica RCB, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_019940:86696986696988859921631Thioflavicoccus mobilis 8321 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007493:546000*54600056875722758Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_003063:30496230496233428329322Agrobacterium tumefaciens str. C58 chromosome linear, complete2e-0661.9BLASTN svgBLASTP svg
NC_020304:752012*75201277575823747Desulfocapsa sulfexigens DSM 10523, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020304:2677372*2677372273472857357Desulfocapsa sulfexigens DSM 10523, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003305:17439391743939177259928661Agrobacterium tumefaciens str. C58 chromosome linear, complete2e-0661.9BLASTN svgBLASTP svg
NC_014831:329983*32998335731327331Thermaerobacter marianensis DSM 12885 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014722:20708642070864209390023037Burkholderia rhizoxinica HKI 454, complete genome9e-0660BLASTN svgBLASTP svg