Pre_GI: BLASTP Hits

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Query: NC_004463:925140:947412 Bradyrhizobium japonicum USDA 110, complete genome

Start: 947412, End: 948326, Length: 915

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008358:2638245:267480326748032675714912Hyphomonas neptunium ATCC 15444, complete genomeParB family protein2e-104379
NC_007494:1:113081130812216909Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceParB-like nuclease9e-96350
NC_009050:567209:587081587081587989909Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRepB plasmid partition6e-95347
NC_007794:561623:570248570248571147900Novosphingobium aromaticivorans DSM 12444, complete genomeRepB plasmid partition4e-80298
NC_019973:6102442:611605961160596116952894Mesorhizobium australicum WSM2073, complete genomeputative transcriptional regulator5e-76284
NC_003064:22535:417014170142588888Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein4e-75281
NC_003306:22228:413944139442281888Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencepartitioning protein4e-75281
NC_020209:4768500:479624847962484797156909Pseudomonas poae RE*1-1-14, complete genomeParB family protein2e-74279
NC_004578:20738:418524185242757906Pseudomonas syringae pv. tomato str. DC3000, complete genomeParB family protein7e-74277
NC_005773:106000:112706112706113614909Pseudomonas syringae pv. phaseolicola 1448A, complete genomeParB family protein5e-71268
NC_011992:3375929:339069333906933391604912Acidovorax ebreus TPSY, complete genomeparB-like partition protein5e-70264
NC_008825:3161146:317093431709343171833900Methylibium petroleiphilum PM1, complete genomeputative ParB-like partioning protein5e-65248
NC_012660:5793200:582339658233965824304909Pseudomonas fluorescens SBW25 chromosome, complete genomeputative ParB-like protein1e-64246
NC_008825:1258500:128814412881441289043900Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-63242
NC_008826:170609:170609170609171508900Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein2e-63242
NC_015381:1:703270327946915Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative ParB-like protein2e-56219
NC_010814:1441327:144464914446491445515867Geobacter lovleyi SZ, complete genomeparB-like partition protein5e-53208
NC_010725:3315007:333987333398733340397525Methylobacterium populi BJ001, complete genome6e-51201
NC_009801:2898426:290951329095132910409897Escherichia coli E24377A, complete genomeParB family protein3e-48192
NC_012967:2669182:268047526804752681371897Escherichia coli B str. REL606 chromosome, complete genomeParB family protein4e-48191
NC_012947:1106000:111342611134261114322897Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeParB domain protein nuclease4e-48191
NC_016514:3573400:358364235836423584538897Enterobacter cloacae EcWSU1 chromosome, complete genomeparB family protein4e-47188
NC_007651:72952:824928249283133642Burkholderia thailandensis E264 chromosome I, complete sequencestage 0 sporulation protein J, putative4e-47188
NC_009436:3117661:312865431286543129550897Enterobacter sp. 638, complete genomenuclease2e-46186
NC_009708:915814:927592927592928482891Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeParB family protein6e-44177
NC_014752:834616:871808871808872554747Neisseria lactamica ST-640, complete genomehypothetical protein3e-42172
NC_011283:4438500:447210044721004472972873Klebsiella pneumoniae 342 chromosome, complete genomeParB family protein8e-40164
NC_014562:2563466:257343525734352574307873Pantoea vagans C9-1 chromosome, complete genomepartitioning protein2e-36153
NC_007651:3064530:315828331582833158693411Burkholderia thailandensis E264 chromosome I, complete sequencestage 0 sporulation protein J, putative3e-25115
NC_020134:2948000:296655529665552967397843Clostridium stercorarium subsp. stercorarium DSM 8532, completeparB-like partition protein2e-0963.2
NC_005241:380415:392322392322393308987Ralstonia eutropha H16 megaplasmid pHG1, complete sequencepartitioning protein1e-0860.8
NC_011898:4044500:406076140607614061606846Clostridium cellulolyticum H10, complete genomeparB-like partition protein1e-0860.5
NC_016627:4871875:488980648898064890639834Clostridium clariflavum DSM 19732 chromosome, complete genomeParB-like partition protein2e-0860.1
NC_014220:2398334:239833423983342399176843Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeparB-like partition protein2e-0756.6
NC_007760:3735749:3739360373936037410571698Anaeromyxobacter dehalogenans 2CP-C, complete genomeparB-like partition protein3e-0756.2
NC_008578:2431074:243732224373222438287966Acidothermus cellulolyticus 11B, complete genomeparB-like partition proteins4e-0755.8
NC_007333:3626510:363603936360393636926888Thermobifida fusca YX, complete genomeParB-like partition protein5e-0755.5
NC_015381:1:613661367035900Burkholderia gladioli BSR3 chromosome 1, complete sequenceParB-like nuclease7e-0755.1
NC_013521:4240468:4246467424646742476451179Sanguibacter keddieii DSM 10542, complete genomechromosome segregation DNA-binding protein1e-0654.3
NC_014210:5752651:576188657618865762830945Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,parB-like partition protein1e-0654.3
NC_015578:3410367:341708634170863417949864Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-0653.9
NC_011661:203929:203929203929204747819Dictyoglomus turgidum DSM 6724, complete genomeparB-like partition protein2e-0653.5
NC_016776:5174606:5182449518244951841611713Bacteroides fragilis 638R, complete genomeputative ParB-family protein2e-0653.5
NC_018664:3073022:308804730880473088895849Clostridium acidurici 9a chromosome, complete genomeparB-like partition protein3e-0652.8
NC_003228:2010643:2067285206728520689971713Bacteroides fragilis NCTC 9343, complete genomeputative ParB-family protein3e-0652.8
NC_015519:2739347:275265527526552753458804Tepidanaerobacter sp. Re1 chromosome, complete genomeparB-like partition protein4e-0652.4
NC_014251:243700:244951244951245709759Streptococcus pneumoniae TCH8431/19A chromosome, complete genomeParB family partitioning protein7e-0651.6
NC_007492:6372900:642968364296836430555873Pseudomonas fluorescens PfO-1, complete genomeParB-like partition protein9e-0651.2