Pre_GI: BLASTP Hits

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Query: NC_004463:925140:932292 Bradyrhizobium japonicum USDA 110, complete genome

Start: 932292, End: 935867, Length: 3576

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:2979959:3006752300675230100903339Myxococcus stipitatus DSM 14675, complete genomehelicase domain-containing protein1e-163578
NC_006177:1422932:1443682144368214470443363Symbiobacterium thermophilum IAM 14863, complete genomeputative DNA helicase4e-138493
NC_006350:845513:8860798860798896393561Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative helicase family protein4e-138493
NC_012731:600518:6381376381376421353999Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-135482
NC_009648:5119271:5151896515189651558943999Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-135482
NC_008782:2326439:2333914233391423379334020Acidovorax sp. JS42, complete genomehelicase domain protein1e-134481
NC_017249:8483159:8504856850485685089084053Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-132473
NC_008554:4699577:4699577469957747034343858Syntrophobacter fumaroxidans MPOB, complete genomehelicase domain protein8e-132472
NC_009076:3564500:3579691357969135836893999Burkholderia pseudomallei 1106a chromosome I, complete sequencehelicase, C-terminal2e-130467
NC_008786:1298817:1313947131394713179123966Verminephrobacter eiseniae EF01-2, complete genomehelicase domain protein1e-128461
NC_014365:2843126:2864987286498728686973711Desulfarculus baarsii DSM 2075 chromosome, complete genomehelicase domain protein1e-128461
NC_015671:3211972:3245751324575132489273177Cellvibrio gilvus ATCC 13127 chromosome, complete genomehelicase domain-containing protein8e-125449
NC_011880:56543:5654356543605143972Cyanothece sp. PCC 7425 plasmid pP742501, complete sequencehelicase domain protein3e-123443
NC_011958:1031592:1040920104092010440783159Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA helicase2e-122441
NC_014479:3939183:3952547395254739558883342Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative DNA helicase3e-120434
NC_008146:861319:8963748963749000363663Mycobacterium sp. MCS, complete genomehelicase-like protein2e-120434
NC_008705:868623:9051039051039087653663Mycobacterium sp. KMS, complete genomehelicase domain protein2e-120434
NC_020126:5558613:5573730557373055769303201Myxococcus stipitatus DSM 14675, complete genomehelicase domain-containing protein1e-120434
NC_012997:4545875:4578490457849045819393450Teredinibacter turnerae T7901, complete genomehelicase domain protein4e-120433
NC_010572:5445081:5476841547684154800653225Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA helicase5e-118426
NC_018750:6237875:6237875623787562417353861Streptomyces venezuelae ATCC 10712, complete genomehelicase6e-118426
NC_013235:508585:5126255126255163053681Nakamurella multipartita DSM 44233, complete genomehelicase domain protein8e-118426
NC_018581:2768743:2811156281115628148393684Gordonia sp. KTR9 chromosome, complete genomehelicase domain-containing protein1e-117424
NC_013521:345308:3628793628793666433765Sanguibacter keddieii DSM 10542, complete genomehelicase family protein7e-117422
NC_014830:3387479:3401722340172234054203699Intrasporangium calvum DSM 43043 chromosome, complete genomehelicase domain protein2e-115417
NC_014828:1335154:1391428139142813946133186Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelicase domain protein2e-111404
NC_013530:2492312:2513451251345125172093759Xylanimonas cellulosilytica DSM 15894, complete genomehelicase domain protein2e-111404
NC_014666:8488567:8502029850202985055203492Frankia sp. EuI1c chromosome, complete genomehelicase domain protein2e-110401
NC_008278:256427:2734192734192774414023Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative superfamily II DNA and RNA helicase.5e-110399
NC_016048:2907702:2914572291457229182553684Oscillibacter valericigenes Sjm18-20, complete genomeputative helicase2e-109398
NC_014210:3248526:3260694326069432646383945Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,helicase domain protein3e-109397
NC_014820:1618606:1629991162999116333533363Cenarchaeum symbiosum A, complete genomeDNA helicase4e-109396
NC_016884:70955:8974689746928503105Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehelicase domain-containing protein9e-109395
NC_015757:70790:8950689506926103105Sulfobacillus acidophilus TPY chromosome, complete genomehelicase-like protein9e-109395
NC_008228:4915500:4928538492853849317533216Pseudoalteromonas atlantica T6c, complete genomehelicase-like2e-108394
NC_007645:5801295:5830096583009658332453150Hahella chejuensis KCTC 2396, complete genomehypothetical protein9e-107389
NC_013526:835117:8351178351178386383522Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomehelicase domain protein1e-106389
NC_017068:1143515:1160743116074311645343792Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative helicase1e-106388
NC_012521:1:1438814388178793492Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein2e-105384
NC_016943:3352413:3360079336007933632643186Blastococcus saxobsidens DD2, complete genomeputative helicase family protein1e-101372
NC_014391:1812500:1821464182146418246313168Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehelicase domain-containing protein1e-100368
NC_014924:2399524:2416574241657424197023129Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomehelicase domain protein9e-100365
NC_008578:2226778:2233717223371722372053489Acidothermus cellulolyticus 11B, complete genomehelicase domain protein2e-96354
NC_017082:3717939:372747337274733728258786Bradyrhizobium sp. S23321, complete genomehypothetical protein3e-81304
NC_008554:4586543:4595769459576945993743606Syntrophobacter fumaroxidans MPOB, complete genomehelicase domain protein2e-62241
NC_014721:2135500:2191913219191321958753963Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehelicase domain protein6e-57223
NC_016114:1474000:1515352151535215189363585Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehelicase domain-containing protein8e-56219
NC_014761:74500:8144581445853113867Oceanithermus profundus DSM 14977 chromosome, complete genomehelicase domain protein2e-50202
NC_003901:357394:3681153681153719423828Methanosarcina mazei Go1, complete genomesuperfamily II DNA/RNA helicase3e-49197
NC_011386:136223:1487641487641518563093Oligotropha carboxidovorans OM5, complete genomehelicase7e-49196
NC_015684:362236:3768533768533799453093Oligotropha carboxidovorans OM5 chromosome, complete genomeDNA helicase7e-49196
NC_020388:1100759:1128502112850211321703669Natronomonas moolapensis 8.8.11 complete genomehelicase domain protein1e-47192
NC_008212:1295061:1312816131281613163283513Haloquadratum walsbyi DSM 16790, complete genomeprobable helicase family protein1e-44182
NC_019964:3028469:3039365303936530430933729Halovivax ruber XH-70, complete genomeDNA/RNA helicase, superfamily II2e-44181
NC_008060:3155133:3173885317388531780904206Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehelicase-like4e-38160
NC_017322:1260526:1279661127966112839924332Sinorhizobium meliloti BL225C chromosome, complete genomehelicase domain-containing protein2e-37158
NC_017030:5558429:5598468559846856028294362Corallococcus coralloides DSM 2259 chromosome, complete genomehelicase domain-containing protein1e-35152
NC_007778:2875973:2892331289233128966054275Rhodopseudomonas palustris HaA2, complete genomeHelicase-like6e-31137
NC_007796:1731500:1741178174117817444263249Methanospirillum hungatei JF-1, complete genomehelicase-like2e-29132
NC_010571:1459363:1475557147555714791263570Opitutus terrae PB90-1, complete genomehelicase domain protein1e-25119