Pre_GI: BLASTP Hits

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Query: NC_004463:6924150:6940651 Bradyrhizobium japonicum USDA 110, complete genome

Start: 6940651, End: 6942096, Length: 1446

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016047:3599095:3621760362176036231031344Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeteichuronic acid biosynthesis protein TuaB3e-37156
NC_011080:2161696:2195401219540121969331533Salmonella enterica subsp. enterica serovar Newport str. SL254,lipopolysaccharide biosynthesis protein WzxC3e-35150
NC_011294:2156425:2188597218859721900751479Salmonella enterica subsp. enterica serovar Enteritidis strcolanic acid exporter3e-35150
NC_011094:2172271:2205504220550422070361533Salmonella enterica subsp. enterica serovar Schwarzengrund strcolanic acid exporter3e-35150
NC_011274:2147427:2179605217960521810831479Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91colanic acid exporter3e-35150
NC_016810:2150709:2181676218167621831541479Salmonella enterica subsp. enterica serovar Typhimurium strputative transmembrane transport protein3e-35150
NC_011149:2110861:2141827214182721433381512Salmonella enterica subsp. enterica serovar Agona str. SL483,lipopolysaccharide biosynthesis protein WzxC2e-35150
NC_011083:2200613:2231580223158022331121533Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipopolysaccharide biosynthesis protein WzxC2e-35150
NC_011205:2283438:2315614231561423171461533Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853colanic acid exporter2e-35150
NC_012125:1693774:1695216169521616967481533Salmonella enterica subsp. enterica serovar Paratyphi C straincolanic acid exporter2e-35150
NC_016857:2150709:2181676218167621831871512Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lipopolysaccharide biosynthesis protein WzxC2e-35150
NC_017046:2150072:2181039218103921825501512Salmonella enterica subsp. enterica serovar Typhimurium str. 798transmembrane transport protein2e-35150
NC_014121:3399685:3429356342935634308341479Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecolanic acid exporter2e-35150
NC_016902:1846492:1847888184788818493661479Escherichia coli KO11FL chromosome, complete genomepolysaccharide biosynthesis protein4e-35149
CP002516:1846492:1847888184788818493661479Escherichia coli KO11, complete genomepolysaccharide biosynthesis protein4e-35149
CP002185:2233732:2256489225648922579671479Escherichia coli W, complete genomeputative colanic acid exporter4e-35149
NC_013361:2848949:2872204287220428736821479Escherichia coli O26:H11 str. 11368 chromosome, complete genomecolanic acid exporter6e-35149
NC_013353:2504072:2529665252966525311431479Escherichia coli O103:H2 str. 12009, complete genomecolanic acid exporter WzxC6e-35149
AP010958:2504072:2529665252966525311431479Escherichia coli O103:H2 str. 12009 DNA, complete genomecolanic acid exporter WzxC6e-35149
NC_011745:2302979:2327456232745623289341479Escherichia coli ED1a chromosome, complete genomecolanic acid exporter6e-35149
NC_003198:2109775:2141948214194821434261479Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transmembrane transport protein4e-35149
CU928160:2155947:2179735217973521812131479Escherichia coli IAI1 chromosome, complete genomecolanic acid exporter4e-35149
NC_016863:2152739:2183706218370621851841479Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1colanic acid exporter3e-35149
NC_016860:2148535:2179502217950221809801479Salmonella enterica subsp. enterica serovar Typhimurium strcolanic acid exporter3e-35149
NC_016856:2204546:2235513223551322369911479Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scolanic acid exporter3e-35149
NC_006905:2175361:2196465219646521979431479Salmonella enterica subsp. enterica serovar Choleraesuis strputative export protein in colanic acid gene cluster3e-35149
NC_003197:2152994:2183961218396121854391479Salmonella typhimurium LT2, complete genomeputative export3e-35149
NC_011742:2093503:2115554211555421170321479Escherichia coli S88 chromosome, complete genomecolanic acid exporter4e-35149
NC_011741:2155947:2179735217973521812131479Escherichia coli IAI1 chromosome, complete genomecolanic acid exporter4e-35149
NC_014618:1752434:1753826175382617553041479Enterobacter cloacae SCF1 chromosome, complete genomepolysaccharide biosynthesis protein1e-34148
NC_013941:2544569:2574442257444225759201479Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeColanic acid exporter WzxC9e-35148
NC_009801:2276131:2301603230160323030811479Escherichia coli E24377A, complete genomepolysaccharide biosynthesis protein WzxC9e-35148
CU928145:2324495:2348829234882923503071479Escherichia coli 55989 chromosome, complete genomecolanic acid exporter8e-35148
NC_011748:2324495:2348829234882923503071479Escherichia coli 55989, complete genomecolanic acid exporter8e-35148
NC_011751:2395882:2417400241740024188781479Escherichia coli UMN026 chromosome, complete genomecolanic acid exporter2e-34147
NC_010473:2183567:2207712220771222091901479Escherichia coli str. K-12 substr. DH10B, complete genomecolanic acid exporter2e-34147
NC_002695:2769387:2793964279396427954421479Escherichia coli O157:H7 str. Sakai, complete genomeputative export protein2e-34147
NC_000913:2092559:2116704211670421181821479Escherichia coli K12, complete genomecolanic acid exporter2e-34147
AC_000091:2096672:2120817212081721222951479Escherichia coli W3110 DNA, complete genomecolanic acid exporter2e-34147
NC_002655:2839600:2864178286417828656561479Escherichia coli O157:H7 EDL933, complete genomeprobable export protein2e-34147
NC_011353:2734222:2758799275879927602771479Escherichia coli O157:H7 str. EC4115 chromosome, complete genomecolanic acid exporter2e-34147
NC_012759:1983975:2009187200918720106651479Escherichia coli BW2952 chromosome, complete genomecolanic acid exporter2e-34147
NC_013008:2733203:2757780275778027592581479Escherichia coli O157:H7 str. TW14359 chromosome, complete genomecolanic acid exporter2e-34147
NC_004337:2098736:2124212212421221256901479Shigella flexneri 2a str. 301, complete genomeprobable export protein1e-34147
NC_008258:2100646:2126077212607721275551479Shigella flexneri 5 str. 8401, complete genomeprobable export protein1e-34147
NC_004741:2081649:2107078210707821085561479Shigella flexneri 2a str. 2457T, complete genomeprobable export protein1e-34147
NC_017328:2153083:2178513217851321799911479Shigella flexneri 2002017 chromosome, complete genomeputative Membrane protein involved in the export of O-antigen and teichoic acid1e-34147
NC_007946:2231872:2256132225613222576101479Escherichia coli UTI89, complete genomelipopolysaccharide biosynthesis protein WzxC3e-34146
NC_011750:1034919:1034919103491910363971479Escherichia coli IAI39 chromosome, complete genomecolanic acid exporter3e-34146
NC_010498:1035406:1035406103540610368841479Escherichia coli SMS-3-5, complete genomepolysaccharide biosynthesis protein WzxC3e-34146
NC_008253:2134110:2156432215643221579101479Escherichia coli 536, complete genomelipopolysaccharide biosynthesis protein WzxC3e-34146
NC_004431:2383901:2406127240612724076051479Escherichia coli CFT073, complete genomeLipopolysaccharide biosynthesis protein wzxC3e-34146
NC_010658:1090104:1090104109010410915821479Shigella boydii CDC 3083-94, complete genomepolysaccharide biosynthesis protein WzxC6e-34145
NC_009792:714953:7163577163577178351479Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-34145
NC_008563:2182270:2205727220572722072051479Escherichia coli APEC O1, complete genomelipopolysaccharide biosynthesis protein5e-34145
NC_012947:1720732:1720732172073217222101479Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecolanic acid exporter5e-34145
NC_012967:2025127:2051797205179720532751479Escherichia coli B str. REL606 chromosome, complete genomecolanic acid exporter5e-34145
NC_007613:864084:8893838893838908611479Shigella boydii Sb227, complete genomeprobable export protein4e-34145
NC_015761:2062345:2084209208420920856871479Salmonella bongori NCTC 12419, complete genometransmembrane transport protein1e-33144
NC_013716:2255102:2279131227913122806091479Citrobacter rodentium ICC168, complete genomeputative flippase1e-33144
NC_015663:4950000:4988266498826649897381473Enterobacter aerogenes KCTC 2190 chromosome, complete genomecolanic acid exporter1e-33144
NC_009436:2836847:2860723286072328622011479Enterobacter sp. 638, complete genomecolanic acid exporter1e-33144
NC_013282:2827757:2853039285303928545171479Cronobacter turicensis, complete genomeLipopolysaccharide biosynthesis protein wzxC9e-33141
NC_009778:1141716:1141716114171611431941479Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-32141
NC_020063:1659795:1659795165979516612731479Enterobacteriaceae bacterium strain FGI 57, complete genomemembrane protein involved in the export of O-antigen and teichoic acid1e-32141
NC_020260:1184174:1184174118417411856521479Cronobacter sakazakii Sp291, complete genomecolanic acid exporter2e-32140
NC_016514:3048883:3074277307427730757551479Enterobacter cloacae EcWSU1 chromosome, complete genomelipopolysaccharide biosynthesis protein wzxC2e-31137
NC_020064:1547524:1567232156723215687131482Serratia marcescens FGI94, complete genomemembrane protein involved in the export of O-antigen and teichoic acid7e-31135
NC_013061:2247191:2271656227165622730891434Pedobacter heparinus DSM 2366, complete genomepolysaccharide biosynthesis protein6e-25115
NC_014733:1857020:1869805186980518712441440Methylovorus sp. MP688 chromosome, complete genomepolysaccharide biosynthesis protein8e-1582
NC_015948:2032399:2062389206238920638581470Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeputative export protein2e-1481.3
NC_009800:2156091:2163469216346921648991431Escherichia coli HS, complete genomeputative polysaccharide biosynthesis protein3e-1377
NC_006395:217139:2225562225562240611506Haloarcula marismortui ATCC 43049 plasmid pNG700, completeprobable export protein3e-1377
NC_015944:353652:3695813695813710861506Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceexport protein6e-1375.9
NC_014659:4299552:4322657432265743241681512Rhodococcus equi 103S, complete genomepolysaccharide biosynthesis protein1e-1274.7
NC_015944:162233:1690221690221703861365Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceexport protein2e-1170.9
NC_016816:1676460:1681308168130816826481341Pantoea ananatis LMG 5342, complete genomeextracellular polysaccharide biosynthesis protein Wzx3e-1170.1
NC_013956:2749685:2773732277373227750721341Pantoea ananatis LMG 20103 chromosome, complete genomeAmsL4e-1170.1
NC_011026:2533017:2545111254511125465591449Chloroherpeton thalassium ATCC 35110, complete genomepolysaccharide biosynthesis protein7e-1169.3
NC_009648:2699739:2728512272851227300141503Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomepolysaccharide biosynthesis protein7e-1168.9
NC_013174:23421:3698436984384471464Jonesia denitrificans DSM 20603, complete genomepolysaccharide biosynthesis protein1e-1068.2
NC_014837:2803447:2822389282238928237291341Pantoea sp. At-9b chromosome, complete genomepolysaccharide biosynthesis protein2e-1067.8
NC_016604:1285277:1301395130139513028581464Mycobacterium rhodesiae NBB3 chromosome, complete genomemembrane protein4e-1066.6
NC_016845:3536886:3561679356167935631151437Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,polysaccharide biosynthesis protein8e-1065.5
NC_014315:3004125:3029907302990730314481542Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide biosynthesis protein8e-1065.5
NC_009832:1719149:1737697173769717391361440Serratia proteamaculans 568, complete genomepolysaccharide biosynthesis protein1e-0965.1
NC_014219:3254268:3271048327104832725201473Bacillus selenitireducens MLS10 chromosome, complete genomepolysaccharide biosynthesis protein1e-0964.7
NC_014562:2049921:2070610207061020719501341Pantoea vagans C9-1 chromosome, complete genomeExtracellular polysaccharide biosynthesis protein wzx2e-0964.3
NC_008740:2905990:2947123294712329486341512Marinobacter aquaeolei VT8, complete genomepolysaccharide biosynthesis protein2e-0964.3
NC_014100:533322:5472785472785487921515Caulobacter segnis ATCC 21756 chromosome, complete genomepolysaccharide biosynthesis protein2e-0964.3
NC_006513:2526843:2536629253662925380891461Azoarcus sp. EbN1, complete genomeputative exopolysaccharide export protein,possibly related with succinoglycan synthesis2e-0964.3
NC_010694:1502019:1506861150686115081951335Erwinia tasmaniensis, complete genomeExopolysaccharide biosynthesis protein4e-0963.2
NC_020541:3156500:3200640320064032021211482Rhodanobacter sp. 2APBS1, complete genomemembrane protein involved in the export of O-antigen and teichoic acid5e-0962.8
NC_002488:2235883:2238081223808122396131533Xylella fastidiosa 9a5c, complete genomeGumJ protein1e-0861.6
NC_007912:174733:1919871919871934381452Saccharophagus degradans 2-40, complete genomeATPase2e-0861.2
NC_010513:1590758:1595418159541815969501533Xylella fastidiosa M12 chromosome, complete genomeGumJ protein2e-0861.2
NC_004556:1611973:1611973161197316135051533Xylella fastidiosa Temecula1, complete genomeGumJ protein2e-0860.8
NC_008702:3580380:3588679358867935900551377Azoarcus sp. BH72, complete genomeconserved hypotheitcal polysaccharide biosynthesis protein3e-0860.5
NC_012214:1588573:1605391160539116067311341Erwinia pyrifoliae Ep1/96, complete genomeExopolysaccharide biosynthesis protein Wzx (synonym for CpsL; similar to AmsL), involved in exopolysaccharid synthesis2e-0860.5
NC_019745:3217552:3228581322858132298731293Gloeocapsa sp. PCC 7428, complete genomepolysaccharide biosynthesis protein4e-0859.7
NC_016776:2473318:2487315248731524887691455Bacteroides fragilis 638R, complete genomeputative transmembrane O-antigen flippase6e-0859.3
NC_013791:1291339:1295075129507512965921518Bacillus pseudofirmus OF4 chromosome, complete genomepolysaccharide biosynthesis protein6e-0859.3
NC_017098:32196:4014640146416151470Spirochaeta africana DSM 8902 chromosome, complete genomemembrane protein6e-0859.3
NC_015160:3556114:3560210356021035617181509Odoribacter splanchnicus DSM 20712 chromosome, complete genomepolysaccharide biosynthesis protein9e-0858.9
NC_013961:2260250:2280397228039722817371341Erwinia amylovora, complete genomeFlippase8e-0858.9
NC_013971:2297777:2317924231792423192641341Erwinia amylovora ATCC 49946 chromosome, complete genomeamylovoran biosynthesis protein8e-0858.9
NC_007759:415456:4217454217454232021458Syntrophus aciditrophicus SB, complete genomeoligosaccharide translocase (flippase)8e-0858.9
NC_015572:1252000:1308631130863113100611431Methylomonas methanica MC09 chromosome, complete genomepolysaccharide biosynthesis protein9e-0858.5
NC_009615:1469642:1493974149397414954191446Parabacteroides distasonis ATCC 8503 chromosome, complete genomepolysaccharide biosynthesis protein2e-0757.8
NC_006347:2327018:2347695234769523491731479Bacteroides fragilis YCH46, complete genomeputative flippase2e-0757.4
NC_015061:3840463:3885060388506038864991440Rahnella sp. Y9602 chromosome, complete genomepolysaccharide biosynthesis protein3e-0757
NC_009617:5489933:5513399551339955148291431Clostridium beijerinckii NCIMB 8052 chromosome, complete genomepolysaccharide biosynthesis protein6e-0756.2
NC_015059:76000:7626276262777581497Acidobacterium sp. MP5ACTX9 plasmid pACIX904, complete sequencepolysaccharide biosynthesis protein9e-0755.5
NC_003450:359759:3719293719293734221494Corynebacterium glutamicum ATCC 13032, complete genomeO-antigen and teichoic acid membrane export protein1e-0655.1
NC_006958:359760:3719303719303734231494Corynebacterium glutamicum ATCC 13032, complete genomeputative translocase involved in export of a cell surface polysaccaride1e-0655.1
NC_014216:2027017:2045191204519120466391449Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomepolysaccharide biosynthesis protein1e-0655.1
NC_007712:1601499:1607091160709116082361146Sodalis glossinidius str. 'morsitans', complete genomeamylovoran biosynthesis protein AmsL1e-0654.7
NC_016818:3887000:3896268389626838977311464Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completemembrane protein4e-0653.1
NC_011369:3022235:3027078302707830285801503Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completepolysaccharide biosynthesis protein5e-0653.1