Pre_GI: BLASTP Hits

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Query: NC_004463:5540924:5552043 Bradyrhizobium japonicum USDA 110, complete genome

Start: 5552043, End: 5552606, Length: 564

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014217:716500:716949716949717506558Starkeya novella DSM 506 chromosome, complete genomedeoxycytidine triphosphate deaminase1e-41169
NC_014246:651801:655183655183655803621Mobiluncus curtisii ATCC 43063 chromosome, complete genomedeoxycytidine triphosphate deaminase5e-21100
NC_014973:243000:254877254877255395519Geobacter sp. M18 chromosome, complete genomedeoxycytidine triphosphate deaminase1e-2099
NC_009654:1729159:173255617325561733140585Marinomonas sp. MWYL1, complete genomedeoxycytidine triphosphate deaminase3e-2098.2
NC_012522:5895946:591558659155865916155570Rhodococcus opacus B4, complete genomedeoxycytidine triphosphate deaminase7e-2097.1
NC_002944:4254011:426877542687754269347573Mycobacterium avium subsp. paratuberculosis K-10, complete genomedeoxycytidine triphosphate deaminase2e-1995.5
NC_010612:681544:700534700534701106573Mycobacterium marinum M, complete genomedeoxycytidine triphosphate deaminase, Dcd2e-1995.1
NC_006087:2439252:244557224455722446177606Leifsonia xyli subsp. xyli str. CTCB07, complete genomedeoxycytidine triphosphate deaminase3e-1994.7
NC_014659:4299552:433215943321594332746588Rhodococcus equi 103S, complete genome2'-deoxycytidine 5'-triphosphate deaminase3e-1994.7
NC_014814:483444:499982499982500554573Mycobacterium sp. Spyr1 chromosome, complete genomedCTP deaminase7e-1993.6
NC_015559:2434000:245325724532572453847591Marinomonas posidonica IVIA-Po-181 chromosome, complete genomedeoxycytidine triphosphate deaminase1e-1892.8
NC_014210:5370868:538555653855565386146591Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,deoxycytidine triphosphate deaminase1e-1892.4
NC_014666:300571:303215303215303811597Frankia sp. EuI1c chromosome, complete genomedeoxycytidine triphosphate deaminase4e-1890.9
NC_010407:3174470:318186531818653182470606Clavibacter michiganensis subsp. sepedonicus chromosome, completedeoxycytidine triphosphate deaminase5e-1890.5
NC_008228:2295841:229701122970112297610600Pseudoalteromonas atlantica T6c, complete genomedeoxycytidine triphosphate deaminase7e-1890.1
NC_015567:1660462:166210216621021662683582Serratia sp. AS9 chromosome, complete genomedeoxycytidine triphosphate deaminase2e-1789
NC_015566:1659288:166209016620901662671582Serratia sp. AS12 chromosome, complete genomedeoxycytidine triphosphate deaminase2e-1789
NC_013508:1289159:129227912922791292860582Edwardsiella tarda EIB202, complete genomedeoxycytidine triphosphate deaminase2e-1789
NC_012779:1286500:128843912884391289020582Edwardsiella ictaluri 93-146, complete genomedeoxycytidine triphosphate deaminase, putative2e-1789
NC_020211:1704500:170450317045031705084582Serratia marcescens WW4, complete genome2'-deoxycytidine 5'-triphosphate deaminase2e-1788.6
NC_009832:1719149:171914917191491719730582Serratia proteamaculans 568, complete genomedeoxycytidine triphosphate deaminase2e-1788.6
NC_013421:3279499:331383833138383314419582Pectobacterium wasabiae WPP163, complete genomedeoxycytidine triphosphate deaminase3e-1788.2
NC_009800:2156091:218587621858762186457582Escherichia coli HS, complete genomedeoxycytidine triphosphate deaminase3e-1787.8
NC_018750:3741581:375690237569023757540639Streptomyces venezuelae ATCC 10712, complete genomeDeoxycytidine triphosphate deaminase5e-1787.4
NC_007712:1601499:160448616044861605067582Sodalis glossinidius str. 'morsitans', complete genome2'-deoxycytidine 5'-triphosphate deaminase7e-1787
NC_013929:4807910:481216648121664812741576Streptomyces scabiei 87.22 chromosome, complete genomedeoxynucleotide triphosphate deaminase6e-1787
NC_015957:196000:204465204465205079615Streptomyces violaceusniger Tu 4113 chromosome, complete genomedeoxycytidine triphosphate deaminase7e-1786.7
NC_010572:4024810:403045340304534031028576Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative deoxynucleotide triphosphate deaminase1e-1686.3
NC_013595:891897:907448907448908023576Streptosporangium roseum DSM 43021, complete genomedeoxycytidine triphosphate deaminase1e-1686.3
NC_016111:3486000:349345934934593494034576Streptomyces cattleya NRRL 8057, complete genomeDeoxycytidine triphosphate deaminase2e-1685.9
NC_003155:5443230:545335454533545453929576Streptomyces avermitilis MA-4680, complete genomedeoxycytidine triphosphate deaminase1e-1685.9
NC_020181:360500:362229362229362810582Enterobacter aerogenes EA1509E, complete genomeDeoxycytidine triphosphate deaminase1e-1685.9
NC_015663:4950000:501137150113715011952582Enterobacter aerogenes KCTC 2190 chromosome, complete genomedeoxycytidine triphosphate deaminase1e-1685.9
NC_017047:1862893:186483118648311865412582Rahnella aquatilis HX2 chromosome, complete genomedeoxycytidine triphosphate deaminase2e-1685.5
NC_016818:1927500:192827919282791928860582Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completedeoxycytidine triphosphate deaminase2e-1685.5
NC_015061:1902251:190418919041891904770582Rahnella sp. Y9602 chromosome, complete genomedeoxycytidine triphosphate deaminase2e-1685.5
NC_013510:262888:269703269703270278576Thermomonospora curvata DSM 43183, complete genomedeoxycytidine triphosphate deaminase2e-1685.5
NC_015953:3456535:346547134654713466046576Streptomyces sp. SirexAA-E chromosome, complete genomedeoxycytidine triphosphate deaminase2e-1685.1
NC_005213:202400:283658283658284254597Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-1684.7
NC_005213:202400:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His4e-1684.3
NC_005213:295994:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His4e-1684.3
NC_005213:384998:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His4e-1684.3
NC_014500:1491660:149379714937971494378582Dickeya dadantii 3937 chromosome, complete genome2'-deoxycytidine 5'-triphosphate deaminase8e-1683.2
NC_003551:260000:280561280561281142582Methanopyrus kandleri AV19, complete genomeDeoxycytidine deaminase1e-1582.8
NC_005791:1377736:139884013988401399460621Methanococcus maripaludis S2, complete genomeBifunctional dCTP deaminase/dUTP diphosphatase1e-1582.4
NC_015847:1462068:148317414831741483794621Methanococcus maripaludis XI chromosome, complete genomebifunctional dCTP deaminase/dUTP diphosphatase2e-1582.4
NC_009637:646092:667201667201667821621Methanococcus maripaludis C7 chromosome, complete genomedeoxycytidine triphosphate deaminase3e-1581.6
NC_008228:372520:381964381964382518555Pseudoalteromonas atlantica T6c, complete genomedeoxycytidine triphosphate deaminase2e-1479
NC_002570:388000:397287397287397820534Bacillus halodurans C-125, complete genomedeoxycytidine triphosphate deaminase4e-1477.8
NC_004545:96422:112936112936113517582Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomedeoxycytidine triphosphate deaminase9e-1476.6
NC_009634:759372:780450780450781070621Methanococcus vannielii SB chromosome, complete genomedeoxycytidine triphosphate deaminase3e-1374.7
NC_009635:1444461:146760014676001468205606Methanococcus aeolicus Nankai-3 chromosome, complete genomedeoxycytidine triphosphate deaminase6e-1373.9
NC_015636:788532:810308810308810937630Methanothermococcus okinawensis IH1 chromosome, complete genomeDeoxycytidine triphosphate deaminase5e-1270.9
NC_009481:873921:887772887772888296525Synechococcus sp. WH 7803 chromosome, complete genomedeoxycytidine triphosphate deaminase1e-1169.7
NC_017954:345430:345552345552346079528Thermogladius cellulolyticus 1633 chromosome, complete genomedeoxycytidine triphosphate deaminase9e-1166.6
NC_014160:869873:871118871118871651534Thermosphaera aggregans DSM 11486 chromosome, complete genomedCTP deaminase8e-1063.5
NC_021182:2360500:237767623776762378200525Clostridium pasteurianum BC1, complete genomedeoxycytidine triphosphate deaminase3e-0961.2
NC_014205:1331594:135131813513181351857540Staphylothermus hellenicus DSM 12710 chromosome, complete genomedeoxycytidine triphosphate deaminase1e-0859.3
NC_014471:1153438:115658011565801157107528Ignisphaera aggregans DSM 17230 chromosome, complete genomedCTP deaminase2e-0755.5
NC_020126:1873794:191547719154771916145669Myxococcus stipitatus DSM 14675, complete genomedeoxycytidine triphosphate deaminase5e-0754.3
NC_018750:6588206:660484066048406605379540Streptomyces venezuelae ATCC 10712, complete genomeDeoxycytidine triphosphate deaminase1e-0652.8
NC_013929:5431954:543895754389575439496540Streptomyces scabiei 87.22 chromosome, complete genomenucleotide-phosphate interconversion protein2e-0652.4
NC_015161:199666:210454210454211065612Deinococcus proteolyticus MRP chromosome, complete genomedeoxycytidine triphosphate deaminase5e-0650.8