Pre_GI: BLASTP Hits

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Query: NC_004463:5540924:5540924 Bradyrhizobium japonicum USDA 110, complete genome

Start: 5540924, End: 5542114, Length: 1191

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:3119000:3133550313355031347401191Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein0722
NC_012560:3416451:3424243342424334255321290Azotobacter vinelandii DJ, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase5e-98358
NC_021150:3416450:3424242342424234255311290Azotobacter vinelandii CA6, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase5e-98358
NC_018012:1076839:1082648108264810837541107Thiocystis violascens DSM 198 chromosome, complete genomeesterase, PHB depolymerase family2e-76286
NC_015727:764744:7660787660787672681191Cupriavidus necator N-1 plasmid BB1p, complete sequencepoly(3-hydroxyalkanoate) depolymerase6e-73274
NC_012808:1122341:112641111264111127316906Methylobacterium extorquens AM1, complete genomeEsterase, PHB depolymerase (C-terminal fragment)9e-70264
NC_013757:1212308:1237229123722912384611233Geodermatophilus obscurus DSM 43160, complete genomeesterase, PHB depolymerase family5e-64245
NC_016590:548312:5564955564955576371143Burkholderia sp. YI23 chromosome 3, complete sequenceesterase, poly(3-hydroxybutyrate) depolymerase1e-60233
NC_012721:2021885:2044340204434020453741035Burkholderia glumae BGR1 chromosome 2, complete genomePolyhydroxybutyrate depolymerase domain protein6e-27122
NC_010801:238430:2442422442422453661125Burkholderia multivorans ATCC 17616 chromosome 3, completepoly(3-hydroxybutyrate) depolymerase4e-27122
NC_008314:2686851:2711012271101227121091098Ralstonia eutropha H16 chromosome 2, complete sequencePoly(3-hydroxybutyrate) depolymerase1e-26120
NC_008062:81338:9294992949942141266Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like2e-26120
NC_008544:55451:7076770767720321266Burkholderia cenocepacia HI2424 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like protein2e-26120
NC_015711:2050360:205346620534662054344879Myxococcus fulvus HW-1 chromosome, complete genomePHB depolymerase family esterase5e-2099
NC_018681:867230:895793895793896755963Nocardia brasiliensis ATCC 700358 chromosome, complete genomeesterase, PHB depolymerase2e-1997.4
NC_013159:3423500:344169934416993442694996Saccharomonospora viridis DSM 43017, complete genomeesterase, PHB depolymerase family1e-1481.6