Pre_GI: BLASTP Hits

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Query: NC_004463:3857763:3865865 Bradyrhizobium japonicum USDA 110, complete genome

Start: 3865865, End: 3866881, Length: 1017

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:3885490:390713739071373908120984Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein2e-1997.1
NC_002932:440191:455327455327456244918Chlorobium tepidum TLS, complete genomeTadB protein9e-1994.7
NC_007498:2046935:205091920509192051896978Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadB1e-1790.5
NC_015588:95697:108643108643109572930Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein1e-1687
NC_010338:4530403:455321545532154554192978Caulobacter sp. K31, complete genometype II secretion system protein3e-1686.3
NC_011894:2618951:265750026575002658444945Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein4e-1685.9
NC_011769:3434744:346271734627173463682966Desulfovibrio vulgaris str. 'Miyazaki F', complete genometype II secretion system protein4e-1685.5
NC_011027:1570955:160219716021971603165969Chlorobaculum parvum NCIB 8327, complete genometype II secretion system protein7e-1685.1
NC_021171:4549673:456131845613184562301984Bacillus sp. 1NLA3E, complete genometype II secretion system F domain-containing protein2e-1583.6
NC_015594:332432:338085338085338978894Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeType II secretion system F domain-containing protein6e-1582
NC_015757:2844599:285604128560412856970930Sulfobacillus acidophilus TPY chromosome, complete genomeType II secretion system F domain protein1e-1480.5
NC_016884:813000:821307821307822224918Sulfobacillus acidophilus DSM 10332 chromosome, complete genometype II secretion system F domain-containing protein2e-1480.5
NC_007614:2675302:267990926799092680880972Nitrosospira multiformis ATCC 25196 chromosome 1, completetype II secretion system protein2e-1480.1
NC_013223:1349000:136491413649141365885972Desulfohalobium retbaense DSM 5692, complete genomeType II secretion system F domain protein1e-1377.4
NC_016002:2453919:249578124957812496755975Pseudogulbenkiania sp. NH8B, complete genometype II secretion system F domain containing protein2e-1377
NC_007794:1553000:156780915678091568795987Novosphingobium aromaticivorans DSM 12444, complete genometype II secretion system protein2e-1376.6
NC_004088:3859173:387126138712613872073813Yersinia pestis KIM, complete genomehypothetical protein3e-1375.9
NC_008541:3282415:329572832957283296678951Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein4e-1375.9
NC_008150:3430000:344208034420803442955876Yersinia pestis Antiqua, complete genomehypothetical protein5e-1375.5
NC_008149:650706:659997659997660872876Yersinia pestis Nepal516, complete genomemembrane protein5e-1375.5
NC_005810:3333000:334240133424013343276876Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-1375.5
NC_010159:259695:271720271720272595876Yersinia pestis Angola, complete genometype II secretion system protein F domain protein5e-1375.5
NC_010634:3905369:392144039214403922315876Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein5e-1375.5
NC_008800:3955284:396767339676733968515843Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein5e-1375.5
NC_003143:741169:750459750459751334876Yersinia pestis CO92, complete genomehypothetical protein5e-1375.5
NC_006155:3992818:400997940099794010854876Yersinia pseudotuberculosis IP 32953, complete genomeputative integral membrane protein.5e-1375.5
NC_009381:522731:532020532020532895876Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1375.5
NC_014029:792719:802003802003802878876Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-1375.5
NC_017154:734875:744166744166745041876Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-1375.5
NC_017160:737000:746344746344747219876Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-1375.5
NC_017168:341233:353968353968354843876Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-1375.5
NC_017265:3724500:373655837365583737433876Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Flp pilus assembly protein TadB5e-1375.5
NC_010465:733916:742221742221743096876Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein8e-1375.1
NC_009708:692508:701852701852702727876Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II secretion system protein F domain1e-1274.3
NC_008541:3282415:330340633034063304338933Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein1e-1274.3
NC_014152:397177:399681399681400622942Thermincola sp. JR, complete genomeType II secretion system F domain protein1e-1273.9
NC_015224:3820338:384611838461183846789672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,type II secretion system protein F domain protein2e-1273.2
NC_008536:5259438:527572152757215276686966Solibacter usitatus Ellin6076, complete genometype II secretion system protein4e-1272.8
NC_018867:361423:380079380079381026948Dehalobacter sp. CF chromosome, complete genomeFlp pilus assembly protein TadB7e-1271.6
NC_016613:2759908:277448427744842775452969Vibrio sp. EJY3 chromosome 1, complete sequencetight adherence TadB-like transmembrane protein1e-1170.9
NC_011886:2950411:297992329799232980855933Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein2e-1170.5
NC_008609:2933468:293953529395352940500966Pelobacter propionicus DSM 2379, complete genometype II secretion system protein2e-1170.1
NC_009901:2427291:244584524458452446822978Shewanella pealeana ATCC 700345, complete genometype II secretion system protein2e-1170.1
NC_010334:2749250:275746327574632758440978Shewanella halifaxensis HAW-EB4, complete genometype II secretion system protein3e-1169.7
NC_016513:974402:986595986595987260666Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadB4e-1169.3
NC_013416:668152:680335680335681222888Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadB7e-1168.6
NC_012913:167034:175954175954176838885Aggregatibacter aphrophilus NJ8700, complete genomeTadB3e-1066.2
NC_010501:908000:934781934781935662882Pseudomonas putida W619, complete genometype II secretion system protein8e-1065.1
NC_011886:2950411:297252029725202973470951Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein1e-0964.3
NC_014830:532122:5450575450575470151959Intrasporangium calvum DSM 43043 chromosome, complete genomeType II secretion system F domain3e-0963.2
NC_002940:1065246:106436210643621065249888Haemophilus ducreyi 35000HP, complete genometight adherence protein B9e-0961.2
NC_004460:81687:964289642897342915Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadB7e-0858.5
NC_014966:638355:653023653023653940918Vibrio vulnificus MO6-24/O chromosome II, complete sequenceFlp pilus assembly protein TadB6e-0858.5
NC_005140:660305:675045675045675962918Vibrio vulnificus YJ016 chromosome II, complete sequenceFlp pilus assembly protein TadB1e-0757.8
NC_013165:2240377:226352522635252264523999Slackia heliotrinireducens DSM 20476, complete genomeFlp pilus assembly protein TadB1e-0757.4
NC_007333:2674596:267993426799342680866933Thermobifida fusca YX, complete genomeputative integral membrane protein3e-0756.2
NC_013716:4306695:437223843722384373140903Citrobacter rodentium ICC168, complete genomeputative tight adherence protein B5e-0755.5
NC_008786:266959:271026271026271898873Verminephrobacter eiseniae EF01-2, complete genometype II secretion system protein1e-0654.7
NC_008609:2933468:293861629386162939524909Pelobacter propionicus DSM 2379, complete genometype II secretion system protein8e-0651.6
NC_004605:741000:756216756216757085870Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TadB1e-0551.2