Pre_GI: BLASTP Hits

Some Help

Query: NC_004463:3857763:3862388 Bradyrhizobium japonicum USDA 110, complete genome

Start: 3862388, End: 3863377, Length: 990

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009511:5362705:536505753650575366055999Sphingomonas wittichii RW1 chromosome, complete genomeSAF domain-containing protein3e-23109
NC_007794:1553000:155982215598221560604783Novosphingobium aromaticivorans DSM 12444, complete genomeFlp pilus assembly CpaB2e-1170.5
NC_004547:843475:861960861960862904945Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1170.5
NC_009901:2427291:243823124382312439049819Shewanella pealeana ATCC 700345, complete genomeSAF domain protein3e-1169.3
NC_010334:2749250:276520927652092766021813Shewanella halifaxensis HAW-EB4, complete genomeSAF domain protein7e-1168.6
NC_016002:2453919:248796324879632488814852Pseudogulbenkiania sp. NH8B, complete genomeFlp pilus assembly protein CpaB6e-1168.6
NC_011894:2618951:265212926521292653052924Methylobacterium nodulans ORS 2060, complete genomeFlp pilus assembly protein CpaB4e-1065.9
NC_007614:2675302:268803526880352688820786Nitrosospira multiformis ATCC 25196 chromosome 1, completeFlp pilus assembly CpaB7e-1065.1
NC_009831:2884851:288634328863432887167825Shewanella sediminis HAW-EB3, complete genomeFlp pilus assembly protein CpaB-like protein9e-1064.7
NC_011894:3885490:390345339034533904247795Methylobacterium nodulans ORS 2060, complete genomeFlp pilus assembly protein CpaB1e-0964.3
NC_015594:332432:342730342730343635906Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeFlp pilus assembly protein CpaB2e-0963.9
NC_021171:4549673:456515045651504565707558Bacillus sp. 1NLA3E, complete genomeSAF domain-containing protein2e-0963.5
NC_002932:440191:448662448662449498837Chlorobium tepidum TLS, complete genomehypothetical protein3e-0962.8
NC_010718:2460893:246659024665902467291702Natranaerobius thermophilus JW/NM-WN-LF, complete genomeFlp pilus assembly protein CpaB2e-0860.1
NC_008609:2933468:294536229453622946237876Pelobacter propionicus DSM 2379, complete genomeSAF domain5e-0858.9
NC_012791:4680500:468451846845184685513996Variovorax paradoxus S110 chromosome 1, complete genomeFlp pilus assembly protein CpaB3e-0756.2
NC_008536:5259438:527804752780475278949903Solibacter usitatus Ellin6076, complete genomeSAF domain1e-0654.3
NC_013223:1349000:137266213726621373549888Desulfohalobium retbaense DSM 5692, complete genomeFlp pilus assembly protein CpaB3e-0653.1
NC_016884:813000:818796818796819536741Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeFlp pilus assembly protein CpaB3e-0653.1
NC_015757:2844599:285870528587052859469765Sulfobacillus acidophilus TPY chromosome, complete genomeFlp pilus assembly protein CpaB3e-0652.8
NC_016613:2759908:278215427821542782870717Vibrio sp. EJY3 chromosome 1, complete sequenceFlp pilus assembly protein CpaB1e-0551.2