Pre_GI: BLASTP Hits

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Query: NC_004463:2475428:2490836 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2490836, End: 2491441, Length: 606

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010725:3273261:328018132801813281077897Methylobacterium populi BJ001, complete genomeExonuclease RNase T and DNA polymerase III3e-56217
NC_009720:3377071:338825933882593389155897Xanthobacter autotrophicus Py2, complete genomeDNA polymerase III subunit epsilon6e-56216
NC_018000:2543500:256118825611882562159972Sinorhizobium fredii USDA 257 chromosome, complete genomeexonuclease RNase T and DNA polymerase III8e-55213
NC_007626:2204767:225224322522432253163921Magnetospirillum magneticum AMB-1, complete genomeDNA polymerase III epsilon subunit and related 3'-5' exonuclease3e-54211
NC_011146:2304475:232637523263752327283909Geobacter bemidjiensis Bem, complete genomeExonuclease RNase T and DNA polymerase III7e-40163
NC_016445:89500:107938107938108843906Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase III subunit epsilon6e-32137
NC_008686:405159:420268420268421179912Paracoccus denitrificans PD1222 chromosome 1, complete sequenceExonuclease, RNase T and DNA polymerase III6e-31134
NC_012668:3037345:303774730377473038652906Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA polymerase III epsilon subunit-like 3'-5' exonuclease3e-30131
NC_010554:2646806:272322427232242724129906Proteus mirabilis HI4320, complete genomeplasmid-related exonuclease3e-30131
NC_021171:415771:416797416797417411615Bacillus sp. 1NLA3E, complete genomeexonuclease family protein2e-1375.9
NC_008313:2629281:264558126455812646324744Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical membrane associated protein,contains exonuclease domain2e-0755.8