Pre_GI: BLASTP Hits

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Query: NC_004463:2059500:2075389 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2075389, End: 2077839, Length: 2451

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4295831:4297092429709243007333642Pseudomonas fluorescens F113 chromosome, complete genomeprotein SbcC4e-40167
NC_016002:1975000:1976360197636019797823423Pseudogulbenkiania sp. NH8B, complete genomenuclease SbcCD subunit C2e-38161
NC_013855:558831:5597075597075634683762Azospirillum sp. B510 plasmid pAB510a, complete sequenceexonuclease3e-37157
NC_009615:2039964:2044986204498620479672982Parabacteroides distasonis ATCC 8503 chromosome, complete genomeATP-dependent exonuclease sbcC6e-37156
NC_015733:1793399:1793399179339917970433645Pseudomonas putida S16 chromosome, complete genomeSMC domain-containing protein1e-36155
NC_015510:8069440:8088951808895180925983648Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSMC domain-containing protein4e-36154
NC_017328:335160:3599823599823631253144Shigella flexneri 2002017 chromosome, complete genomeATP-dependent dsDNA exonuclease4e-36153
NC_015497:1058980:1066367106636710700533687Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeSMC domain protein2e-35151
NC_016745:123772:1392501392501426603411Oceanimonas sp. GK1 chromosome, complete genomeSMC domain-containing protein5e-34147
NC_007484:755058:7563267563267596013276Nitrosococcus oceani ATCC 19707, complete genomeATP-dependent dsDNA exonuclease (SbcC)1e-32142
NC_016776:3485688:3494865349486534978282964Bacteroides fragilis 638R, complete genomeputative exonuclease1e-32142
NC_008740:637870:6514396514396547143276Marinobacter aquaeolei VT8, complete genomeSMC domain protein1e-32142
NC_003228:3455405:3463154346315434661172964Bacteroides fragilis NCTC 9343, complete genomeputative exonuclease7e-32139
NC_015276:2552484:2552484255248425562843801Marinomonas mediterranea MMB-1 chromosome, complete genomeSMC domain protein2e-30135
NC_014972:3688000:3712226371222637158883663Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSMC domain-containing protein1e-26122
NC_020054:2033982:2036050203605020391333084Fibrella aestuarina BUZ 2 drat genomeNuclease sbcCD subunit C9e-26119
NC_004463:2059500:206432120643212064581261Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-1687.4
NC_015930:821342:8269308269308300673138Lactococcus garvieae ATCC 49156, complete genomeexonuclease SbcC6e-1687
NC_014554:1339566:1347871134787113510563186Lactobacillus plantarum subsp. plantarum ST-III chromosome,exonuclease SbcC6e-1686.7
NC_015172:1255956:1260972126097212641393168Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeSMC domain-containing protein2e-1584.7
NC_021171:1661923:1670095167009516732323138Bacillus sp. 1NLA3E, complete genomeSbcC family exonuclease4e-1584
NC_013715:767722:7862597862597895523294Rothia mucilaginosa DY-18, complete genomeATPase involved in DNA repair8e-1583.2
NC_015437:767572:7702657702657733393075Selenomonas sputigena ATCC 35185 chromosome, complete genomeSMC domain protein4e-1377.8
NC_004460:81687:8168781687847523066Vibrio vulnificus CMCP6 chromosome II, complete sequenceATPase involved in DNA repair5e-1377
NC_011772:2166000:2184317218431721874063090Bacillus cereus G9842, complete genomeputative exonuclease9e-1376.3
NC_011725:2206000:2224750222475022278393090Bacillus cereus B4264 chromosome, complete genomeexonuclease1e-1276.3
NC_014335:2151404:2170610217061021736993090Bacillus cereus biovar anthracis str. CI chromosome, completeexonuclease SbcC1e-1275.9
NC_014966:638355:6383556383556414203066Vibrio vulnificus MO6-24/O chromosome II, complete sequenceexonuclease SbcC1e-1275.9
NC_005957:2196000:2213974221397422170633090Bacillus thuringiensis serovar konkukian str. 97-27, completeexonuclease SbcC1e-1275.9
NC_011773:2239753:2258273225827322613623090Bacillus cereus AH820 chromosome, complete genomeputative exonuclease1e-1275.9
NC_011658:2275864:2293805229380522968943090Bacillus cereus AH187 chromosome, complete genomeputative exonuclease1e-1275.9
NC_012472:2240000:2258080225808022611693090Bacillus cereus 03BB102, complete genomeputative exonuclease1e-1275.9
NC_014171:2177353:2196894219689421999833090Bacillus thuringiensis BMB171 chromosome, complete genomeexonuclease SbcC1e-1275.9
NC_005140:660305:6603056603056633703066Vibrio vulnificus YJ016 chromosome II, complete sequenceputative exonuclease SbcC2e-1275.1
NC_013520:1559000:1577803157780315808863084Veillonella parvula DSM 2008, complete genomeATPase involved in DNA repair-like protein2e-1275.1
NC_003997:2175843:2194319219431921974083090Bacillus anthracis str. Ames, complete genomeexonuclease, putative4e-1274.3
NC_005945:2175871:2194425219442521975143090Bacillus anthracis str. Sterne, complete genomeexonuclease, putative4e-1274.3
NC_007530:2175967:2194443219444321975323090Bacillus anthracis str. 'Ames Ancestor', complete genomeexonuclease, putative4e-1274.3
NC_012659:2175867:2194343219434321974323090Bacillus anthracis str. A0248, complete genomeputative exonuclease4e-1274.3
NC_016111:409852:4307414307414337493009Streptomyces cattleya NRRL 8057, complete genomeATP-dependent dsDNA exonuclease4e-1170.9
NC_015975:441580:4427044427044458083105Lactobacillus ruminis ATCC 27782 chromosome, complete genomeExonuclease SbcCD subunit C8e-1169.7
NC_010516:583870:5876355876355911653531Clostridium botulinum B1 str. Okra, complete genomeexonuclease SbcC3e-1067.8
NC_009699:564455:5709295709295744593531Clostridium botulinum F str. Langeland chromosome, complete genomeexonuclease SbcC7e-1066.6
NC_017955:4746441:4746441474644147487652325Modestobacter marinus, complete genomehypothetical protein8e-1066.6
NC_012658:545840:5635745635745671043531Clostridium botulinum Ba4 str. 657 chromosome, complete genomeexonuclease SbcCD subunit C8e-1066.6
NC_016630:1610723:1607605160760516107363132Filifactor alocis ATCC 35896 chromosome, complete genomeexonuclease SbcC1e-0965.9
NC_015500:2112975:2146324214632421494163093Treponema brennaborense DSM 12168 chromosome, complete genomeexonuclease2e-0965.1
NC_010612:4400260:4417219441721944202273009Mycobacterium marinum M, complete genomechromosome partition ATPase protein1e-0862.8
NC_015578:3561838:3580249358024935834313183Treponema primitia ZAS-2 chromosome, complete genomenuclease sbcCD subunit C2e-0862
NC_019904:2010999:2007979200797920110023024Echinicola vietnamensis DSM 17526 chromosome, complete genomeDNA repair ATPase4e-0860.8
NC_015425:405058:4139804139804175103531Clostridium botulinum BKT015925 chromosome, complete genomeexonuclease1e-0759.3
NC_009617:1165539:1172409117240911759003492Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeSMC domain-containing protein2e-0758.2
NC_014633:339181:3420573420573450743018Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceSMC domain-containing protein3e-0654.7