Pre_GI: BLASTP Hits

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Query: NC_004463:2059500:2059723 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2059723, End: 2061480, Length: 1758

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:8165826:8165826816582681675711746Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein01015
NC_010465:804249:8173048173048191721869Yersinia pseudotuberculosis YPIII, complete genomeputative antigenic leucine-rich repeat protein1e-81304
NC_017168:4509918:4526115452611545279951881Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein6e-80298
NC_008149:3648139:3669702366970236715821881Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein6e-80298
NC_008150:3711953:3723173372317337250531881Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein6e-80298
NC_017154:848500:8700868700868719331848Yersinia pestis D106004 chromosome, complete genomeantigenic leucine-rich repeat protein1e-79298
NC_010465:804249:8208868208868227331848Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein6e-79295
NC_008150:3711953:3727411372741137292281818Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein1e-72274
NC_017154:848500:8665908665908684071818Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein1e-72274
NC_017168:4509918:4522652452265245244691818Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein1e-72274
NC_008149:3648139:3666229366622936680551827Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein8e-72271
NC_011080:2342672:2342672234267223450382367Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein1e-70268
NC_010102:683444:7025587025587049242367Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-70266
NC_011294:2334979:2334979233497923373452367Salmonella enterica subsp. enterica serovar Enteritidis strsecreted effector protein3e-70266
NC_011205:2462025:2462025246202524643912367Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-70266
NC_016832:687000:7044647044647068302367Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,E3 ubiquitin-protein ligase sspH24e-70266
NC_003198:2297837:2297837229783723002032367Salmonella enterica subsp. enterica serovar Typhi str. CT18,secreted effector protein4e-70266
NC_004631:685357:7045107045107068762367Salmonella enterica subsp. enterica serovar Typhi Ty2, completesecreted effector protein4e-70266
NC_011083:2375061:2388465238846523908312367Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,leucine-rich repeat protein3e-70266
NC_003197:2327474:2340885234088523432512367Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein3e-70266
NC_016810:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein3e-70266
NC_015761:1181186:1188971118897111914122442Salmonella bongori NCTC 12419, complete genomeleucine rich repeat virulence protein2e-70266
NC_017046:2324554:2337965233796523403312367Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted effector protein3e-70266
NC_016863:2324293:2340630234063023429962367Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-70266
NC_016860:2323017:2336428233642823387942367Salmonella enterica subsp. enterica serovar Typhimurium strleucine-rich repeat protein3e-70266
NC_016857:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-70266
NC_016856:2379027:2392438239243823948042367Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-70266
NC_012125:1517925:1537079153707915392652187Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-70265
NC_007384:1320287:1346060134606013478111752Shigella sonnei Ss046, complete genomeinvasion plasmid antigen9e-68258
NC_011149:1236689:1237394123739412397242331Salmonella enterica subsp. enterica serovar Agona str. SL483,leucine-rich repeat protein2e-66254
NC_010067:191190:1956651956651977012037Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-65251
NC_012779:1286500:1320729132072913231072379Edwardsiella ictaluri 93-146, complete genomeleucine-rich repeat protein2e-64246
NC_015761:1181186:1206110120611012087912682Salmonella bongori NCTC 12419, complete genomeleucine rich-repeat virulence protein2e-62241
NC_016856:1326503:1332051133205113341532103Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SSspH11e-62241
NC_010067:892729:9070099070099092762268Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-62240
NC_004741:2009769:2023205202320520248481644Shigella flexneri 2a str. 2457T, complete genomeinvasion plasmid antigen1e-60234
NC_017328:2090679:2102130210213021037731644Shigella flexneri 2002017 chromosome, complete genomeInvasion plasmid antigen2e-60233
NC_008258:2045000:2055196205519620568391644Shigella flexneri 5 str. 8401, complete genomeinvasion plasmid antigen2e-60233
NC_007613:1038000:1044320104432010459631644Shigella boydii Sb227, complete genomeinvasion plasmid antigen3e-60233
NC_017319:192482:2130342130342147611728Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery3e-60233
NC_004851:191709:2131522131522148791728Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery3e-60233
NC_012779:1286500:1318047131804713201612115Edwardsiella ictaluri 93-146, complete genomeSspH12e-57224
NC_010067:1782998:1799793179979318009831191Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-42174
NC_007607:87000:1104271104271119711545Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceinvasion plasmid antigen, fragment3e-42173
NC_017249:8283701:831025483102548310592339Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-28125
NC_004463:1898648:194677319467731947111339Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein8e-28125
NC_017168:4509918:452467745246774525552876Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein6e-1996.3
NC_017154:848500:868615868615869490876Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein6e-1996.3
NC_008149:3648139:366826436682643669139876Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein6e-1996.3
NC_008150:3711953:372561637256163726491876Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein6e-1996.3
NC_010465:804249:819734819734820639906Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein1e-1895.5
NC_010337:98974:1205681205681293908823Heliobacterium modesticaldum Ice1, complete genomemultidomain protein with s-layer homology region, glug motif, ig motif, i-set domain, pkd domain1e-1791.7
NC_008255:3331613:3332977333297733352682292Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein with multiple leucine-rich repeat domains1e-1379
NC_017249:8283701:830986683098668310315450Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1377.4
NC_004463:1898648:194711919471191947499381Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-1274.7
NC_010634:3155741:3157433315743331585721140Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-1170.1
NC_006155:3237990:3239683323968332408221140Yersinia pseudotuberculosis IP 32953, complete genomeputative antigenic leucine-rich repeat protein4e-1170.1
NC_015572:2186394:2214273221427322157871515Methylomonas methanica MC09 chromosome, complete genomeadenylate cyclase7e-0962.8
NC_009348:1968826:1980504198050419818771374Aeromonas salmonicida subsp. salmonicida A449, complete genomeSerine/threonine protein kinase1e-0862
NC_015160:2418317:242934924293492430212864Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein5e-0860.1
NC_007969:1095438:1113443111344311155842142Psychrobacter cryohalolentis K5, complete genomeLeucine-rich repeat, typical subtype6e-0859.7
NC_007645:3630884:3656391365639136575031113Hahella chejuensis KCTC 2396, complete genomeLeucine-rich repeat (LRR) protein3e-0757.4
NC_015424:2510764:2514813251481325161831371Aeromonas veronii B565 chromosome, complete genomeserine/threonine protein kinase3e-0757
NC_007645:6647500:665151766515176652437921Hahella chejuensis KCTC 2396, complete genomeLeucine-rich repeat (LRR) protein5e-0756.6
NC_015376:2010009:2029236202923620305641329Burkholderia gladioli BSR3 chromosome chromosome 2, completeProtein kinase2e-0654.3
NC_015172:1471501:14866231486623149964213020Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecell wall binding repeat 2-containing protein5e-0653.1
NC_007969:2885249:289061228906122891502891Psychrobacter cryohalolentis K5, complete genomeleucine-rich repeat8e-0652.4