Pre_GI: BLASTP Hits

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Query: NC_004463:1898648:1901529 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1901529, End: 1902575, Length: 1047

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011666:3001513:3017723301772330187721050Methylocella silvestris BL2, complete genomehydrogenase expression/formation protein HypE2e-121435
NC_007626:1746475:1776475177647517775241050Magnetospirillum magneticum AMB-1, complete genomeHydrogenase expression/formation protein hypE6e-114410
NC_008340:2272692:2287541228754122885931053Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase expression/formation protein HypE4e-105381
NC_012483:3529895:3538925353892535400491125Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase expression/formation protein HypE4e-86318
NC_010336:852915:8654298654298664541026Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein HypE2e-83309
NC_021182:1983456:1997205199720519982121008Clostridium pasteurianum BC1, complete genomehydrogenase expression/formation protein HypE6e-79294
NC_021182:1761789:1775857177585717768641008Clostridium pasteurianum BC1, complete genomehydrogenase expression/formation protein HypE6e-79294
NC_007413:5742406:5761449576144957625521104Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/formation protein HypE5e-79294
NC_003272:784437:8048908048908059931104Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein6e-77288
NC_011898:513835:5339705339705349831014Clostridium cellulolyticum H10, complete genomehydrogenase expression/formation protein HypE8e-77287
NC_011296:530408:535105535105536103999Thermodesulfovibrio yellowstonii DSM 11347, complete genomehydrogenase expression/formation protein HypE3e-76285
NC_009937:673820:6776816776816787481068Azorhizobium caulinodans ORS 571, complete genomehydrogenase expression/formation protein2e-75282
NC_013921:1614397:161845516184551619444990Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase expression/formation protein HypE4e-74278
NC_014209:1580423:158442915844291585418990Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase expression/formation protein HypE7e-74277
NC_015958:141500:151192151192152181990Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase expression/formation protein HypE3e-73275
NC_008253:2828573:2830826283082628318361011Escherichia coli 536, complete genomehydrogenase isoenzymes formation protein HypE6e-72271
NC_015555:114977:126282126282127271990Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase expression/formation protein HypE9e-72270
NC_013730:4636575:4652564465256446535981035Spirosoma linguale DSM 74, complete genomehydrogenase expression/formation protein HypE1e-71270
NC_009801:3013838:3016445301644530174551011Escherichia coli E24377A, complete genomehydrogenase expression/formation protein HypE1e-71270
NC_017273:352150:3742303742303752641035Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase expression/formation protein HypE1e-70266
NC_013222:229190:2461042461042471231020Robiginitalea biformata HTCC2501, complete genomeHydrogenase expression/formation protein HypE3e-68258
NC_010067:84093:1100811100811110911011Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-67256
NC_015185:875324:896785896785897774990Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hydrogenase expression/formation protein HypE2e-67256
NC_015565:348941:3711823711823721921011Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase expression/formation protein HypE3e-67256
NC_013161:2804228:2825563282556328266091047Cyanothece sp. PCC 8802, complete genomehydrogenase expression/formation protein HypE8e-67254
NC_014926:875948:880435880435881424990Thermovibrio ammonificans HB-1 chromosome, complete genomehydrogenase expression/formation protein HypE7e-65247
NC_010278:1467146:147315114731511474092942Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase maturation factor3e-64245
NC_016627:1133759:114743411474341148432999Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase expression/formation protein HypE7e-64244
NC_009092:1989977:2006941200694120079511011Shewanella loihica PV-4, complete genomehydrogenase expression/formation protein HypE5e-62238
NC_009901:2427291:2449309244930924503251017Shewanella pealeana ATCC 700345, complete genomehydrogenase expression/formation protein HypE2e-61236
NC_010001:2125500:214159521415952142572978Clostridium phytofermentans ISDg, complete genomehydrogenase expression/formation protein HypE3e-59229
NC_010334:2749250:2753864275386427548801017Shewanella halifaxensis HAW-EB4, complete genomehydrogenase expression/formation protein HypE4e-59228
NC_013887:1462918:1476310147631014773171008Methanocaldococcus sp. FS406-22 chromosome, complete genomehydrogenase expression/formation protein HypE7e-59228
NC_000909:597692:6020816020816030881008Methanocaldococcus jannaschii DSM 2661, complete genomehydrogenase expression/formation protein (hypE)2e-58226
NC_014328:2518081:2528861252886125298651005Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrogenase expression/formation protein HypE6e-58224
NC_013156:573037:5884705884705894771008Methanocaldococcus fervens AG86, complete genomehydrogenase expression/formation protein HypE1e-57224
NC_015499:1097432:1104638110463811056481011Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase expression/formation protein HypE3e-56218
NC_020411:28995:438594385944845987Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein, carbamoyl dehydratase HypE3e-53209
NC_015587:28997:438614386144847987Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase expression/formation protein HypE3e-53209
NC_015557:30622:438254382544811987Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase expression/formation protein HypE3e-53209
NC_019942:987134:104506210450621046057996Aciduliprofundum sp. MAR08-339, complete genomehydrogenase expression/formation protein HypE5e-53208
NC_017192:1841987:185093118509311851929999Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypE4e-51202
NC_007575:1484305:149058614905861491584999Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/formation protein HypE9e-50197
NC_008698:1556223:1558551155855115596121062Thermofilum pendens Hrk 5, complete genomehydrogenase expression/formation protein HypE8e-41167
NC_013741:1037176:1043261104326110442951035Archaeoglobus profundus DSM 5631, complete genomehydrogenase expression/formation protein HypE8e-38157
NC_007644:711476:7264147264147280001587Moorella thermoacetica ATCC 39073, complete genomeAIR synthase related protein-like2e-1067
NC_008698:1612873:1613787161378716147941008Thermofilum pendens Hrk 5, complete genomeAIR synthase related protein domain protein4e-1065.9
NC_010321:1361748:138366813836681384663996Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeAIR synthase-like protein6e-1065.5
NC_015958:1465631:148776114877611488756996Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeAIR synthase-like protein domain-containing protein9e-1064.7
NC_015519:245036:2566282566282576351008Tepidanaerobacter sp. Re1 chromosome, complete genomeThiamine-phosphate kinase4e-0962.8
NC_012883:695652:699517699517700506990Thermococcus sibiricus MM 739, complete genomeHydrogenase expression/formation protein HypE5e-0962.4
NC_014209:1363151:138541913854191386414996Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,AIR synthase related protein domain protein2e-0860.1
NC_013158:363222:3837783837783848001023Halorhabdus utahensis DSM 12940, complete genomeAIR synthase related protein domain protein1e-0757.8