Pre_GI: BLASTP Hits

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Query: NC_004463:18497:39329 Bradyrhizobium japonicum USDA 110, complete genome

Start: 39329, End: 41203, Length: 1875

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009720:4406991:4436904443690444386431740Xanthobacter autotrophicus Py2, complete genomehypothetical protein0859
NC_014834:959986:9609979609979627361740Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV secretory pathway VirD2 component0837
NC_008686:1472899:1472899147289914746531755Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein0817
NC_017249:18493:3932339323404981176Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein0770
NC_010125:381711:4023154023154040541740Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein0751
NC_016027:2512297:2516500251650025182421743Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein0704
NC_011365:1135750:1157246115724611590001755Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein6e-164577
NC_007643:955362:9709319709319727421812Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein4e-159561
NC_010338:2443765:2446096244609624478171722Caulobacter sp. K31, complete genomehypothetical protein1e-140500
NC_014100:2782000:2797176279717627988821707Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein3e-133475
NC_015556:2265940:2284506228450622864551950Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein5e-105382
NC_015381:2859000:2890870289087028928311962Burkholderia gladioli BSR3 chromosome 1, complete sequencetype IV secretory pathway VirD2 component9e-101368
NC_008577:1455000:1481079148107914830521974Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein5e-95348
NC_011386:3723019:20620622632058Oligotropha carboxidovorans OM5, complete genomehypothetical protein1e-89330
NC_008752:725189:7501817501817521691989Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-87324
NC_011992:3752867:3773366377336637753331968Acidovorax ebreus TPSY, complete genomehypothetical protein7e-82305
NC_014910:242845:2601642601642621461983Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein1e-81304
NC_003295:2787371:2804432280443228064832052Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL/UNKNOWN PROTEIN8e-81301
NC_016027:2446806:2463166246316624652772112Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein5e-80299
NC_010170:4800000:4824978482497848269391962Bordetella petrii, complete genomeprobable conjugal transfer protein VirD26e-80298
NC_009719:1972545:1973557197355719755421986Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein2e-75283
NC_010943:1332243:1345632134563213475961965Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-74281
NC_010125:1538335:1552113155211315542242112Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein1e-73278
NC_007925:3933765:3950567395056739526182052Rhodopseudomonas palustris BisB18, complete genomehypothetical protein1e-71271
NC_014500:842493:8679708679708699371968Dickeya dadantii 3937 chromosome, complete genomeVirD2 components relaxase1e-71271
NC_015186:2908387:2910505291050529125502046Acidiphilium multivorum AIU301, complete genomehypothetical protein9e-72271
NC_011365:1171536:1197201119720111993122112Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein3e-71270
NC_014006:344331:3584373584373605002064Sphingobium japonicum UT26S chromosome 1, complete genometype IV secretory pathway VirD2 component9e-68258
NC_012791:2233098:2233098223309822348101713Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein1e-66254
NC_007802:3575739:3580699358069935827832085Jannaschia sp. CCS1, complete genomehypothetical protein1e-62241
NC_014414:2540189:2544170254417025461071938Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein3e-51203
NC_012982:711122:7261567261567280961941Hirschia baltica ATCC 49814, complete genomehypothetical protein9e-46185
NC_011365:1865687:186676018667601867389630Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome1e-44181
NC_017249:3119000:312451831245183125219702Bradyrhizobium japonicum USDA 6, complete genometransposase3e-44180
NC_011059:670345:6729736729736749041932Prosthecochloris aestuarii DSM 271, complete genomehypothetical protein2e-43177
NC_013422:1755875:1774266177426617757471482Halothiobacillus neapolitanus c2, complete genomeType IV secretory pathway VirD2 pilin (relaxase)-like protein4e-37156
NC_006526:1976779:1998005199800519992641260Zymomonas mobilis subsp. mobilis ZM4, complete genomeVirD2 components relaxase2e-35150
NC_011662:2320100:235038623503862351012627Thauera sp. MZ1T, complete genome3e-31137
NC_015850:1242010:1255351125535112570961746Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein2e-28127
NC_011206:1264639:1279646127964612811961551Acidithiobacillus ferrooxidans ATCC 53993, complete genomeType IV secretory pathway VirD2 pilin (relaxase)-like protein2e-28127
NC_012668:3037345:305165530516553052539885Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein8e-28125
NC_016445:89500:971099710997930822Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein8e-28125
NC_017249:3119000:312406831240683124460393Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-26119
NC_017249:3119000:312375331237533123947195Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1998.2
NC_010410:3606826:367497536749753675871897Acinetobacter baumannii AYE, complete genome1e-1895.5
NC_015385:1875671:1897372189737218985651194Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein1e-1482
NC_015386:107000:1203881203881215841197Treponema succinifaciens DSM 2489 plasmid pTRESU01, completehypothetical protein4e-1273.6