Pre_GI: BLASTP Hits

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Query: NC_004463:1717890:1745286 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1745286, End: 1745522, Length: 237

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:8510121:854866085486608548896237Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-38158
NC_002678:763808:780697780697780948252Mesorhizobium loti MAFF303099, complete genomehypothetical protein3e-1580.5
NC_014217:4550544:455986045598604560108249Starkeya novella DSM 506 chromosome, complete genomehelix-turn-helix domain protein1e-1375.1
NC_014034:1330843:134702813470281347285258Rhodobacter capsulatus SB1003 chromosome, complete genomeXRE family transcriptional regulator4e-1270.1
NC_007626:697926:712256712256712492237Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator4e-1270.1
NC_007925:3933765:394934239493423949620279Rhodopseudomonas palustris BisB18, complete genometranscriptional regulator, XRE family7e-1269.3
NC_009428:807577:825669825669825926258Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeXRE family transcriptional regulator7e-1269.3
NC_008687:965152:972058972058972303246Paracoccus denitrificans PD1222 chromosome 2, complete sequencehelix-turn-helix domain protein4e-1063.5
NC_007651:3064530:313900931390093139266258Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-binding protein5e-1063.2
NC_005773:5310339:531147853114785311723246Pseudomonas syringae pv. phaseolicola 1448A, complete genomeDNA-binding protein7e-1062.8
NC_009076:3564500:360646236064623606719258Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, XRE family3e-0960.8
NC_014323:4665610:467335646733564673646291Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-0858.2
NC_013131:8480384:850444485044448504677234Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, XRE family9e-0855.8
NC_020063:1051310:105768110576811057920240Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcription factor, MBF1 like protein2e-0754.7
NC_004547:1062410:107419910741991074447249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein5e-0753.1
NC_010338:1394550:140713514071351407392258Caulobacter sp. K31, complete genomehelix-turn-helix domain protein1e-0652
NC_007951:2233676:224693922469392247205267Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional Regulator, XRE family1e-0652
NC_020541:1786500:179882317988231799110288Rhodanobacter sp. 2APBS1, complete genomeputative transcriptional regulator3e-0650.8