Pre_GI: BLASTP Hits

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Query: NC_004461:205068:215313 Staphylococcus epidermidis ATCC 12228, complete genome

Start: 215313, End: 215960, Length: 648

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a non-biofilm-forming, non-infection associated strain used for detection of residual antibiotics in food products. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Resistant to many antibiotics including penicillins and cephalosporins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011999:1567818:158473315847331585425693Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein2e-46185
NC_014479:3245126:326906732690673269741675Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeglycine betaine/carnitine/choline/choline sulfate ABC transporter permease1e-45182
NC_016047:3406488:342553434255343426202669Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycine betaine/carnitine/choline transport system permease OpuCD2e-45182
NC_014479:3245126:326349132634913264162672Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease3e-43174
NC_016047:3406488:342124934212493421920672Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBD5e-42171
NC_013406:5066769:510984751098475110548702Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-27121
NC_006510:310212:341910341910342539630Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-27121
NC_016593:353505:379641379641380270630Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completebinding-protein-dependent transport system inner membrane component3e-27121
NC_009328:293000:312108312108312737630Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease5e-27120
NC_015425:2528549:2560000256000025615861587Clostridium botulinum BKT015925 chromosome, complete genomeputative glycine betaine/carnitine/choline ABC transporter7e-27120
NC_013411:1168049:118585111858511186480630Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component1e-26120
NC_014915:308056:325858325858326487630Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-26120
NC_014206:345499:376734376734377363630Geobacillus sp. C56-T3 chromosome, complete genomebinding-protein-dependent transporters inner membrane component4e-26118
NC_011999:1567818:158318915831891583833645Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein4e-24111
NC_009495:1759759:1776428177642817780141587Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease/substrate-binding protein4e-24111
NC_014479:3245126:326511132651113265764654Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease4e-23108
NC_004461:205068:213697213697214332636Staphylococcus epidermidis ATCC 12228, complete genomeopuCB protein6e-23107
NC_014377:210888:220474220474221115642Thermosediminibacter oceani DSM 16646 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component9e-23106
NC_014209:1580423:159879915987991599437639Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component1e-22106
NC_016047:3406488:342286934228693423522654Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBB1e-22106
NC_015589:3241364:324228832422883242905618Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-21102
NC_014121:2247913:226518222651822265829648Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein3e-21102
NC_009727:1899876:1899876189987619014561581Coxiella burnetii Dugway 7E9-12, complete genomeABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein6e-21100
NC_016605:50695:6941669416709451530Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesubstrate binding domain of ABC-type glycine betaine transport system family protein1e-1996.7
NC_012883:1695703:169570316957031696320618Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proW-1)2e-1995.9
NC_014614:6115:392333923339889657Clostridium sticklandii, complete genomeGlycine betaine transport system permease protein / Glycine betaine-binding protein (fragment)5e-1994.4
NC_014315:2711852:2731698273169827332031506Nitrosococcus watsoni C-113 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein6e-1994.4
NC_013520:1905554:1927618192761819291501533Veillonella parvula DSM 2008, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system8e-1993.6
NC_015589:3241364:324292832429283243569642Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-1892
NC_016023:1143130:1143130114313011446591530Bacillus coagulans 36D1 chromosome, complete genomeglycine betaine ABC transporter periplasmic protein3e-1891.7
NC_010718:128423:141500141500142150651Natranaerobius thermophilus JW/NM-WN-LF, complete genomebinding-protein-dependent transport systems inner membrane component3e-1891.7
NC_010718:128423:143328143328144173846Natranaerobius thermophilus JW/NM-WN-LF, complete genomebinding-protein-dependent transport systems inner membrane component4e-1891.3
NC_013406:5066769:510821851082185108883666Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component8e-1890.5
NC_007576:1854136:1854136185413618556621527Lactobacillus sakei subsp. sakei 23K, complete genomePutative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits2e-1789.4
NC_016626:400080:403660403660404385726Burkholderia sp. YI23 plasmid byi_1p, complete sequencebinding-protein-dependent transport system inner membrane protein4e-1788.2
NC_008525:270310:2858552858552873841530Pediococcus pentosaceus ATCC 25745, complete genomeABC-type proline/glycine betaine transport system, permease and substrate binding protein7e-1787.4
NC_007963:2644930:264611626461162646847732Chromohalobacter salexigens DSM 3043, complete genomebinding-protein-dependent transport systems inner membrane component1e-1686.7
NC_008148:583030:608239608239608946708Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component9e-1683.6
NC_009512:1025365:102536510253651026078714Pseudomonas putida F1, complete genomebinding-protein-dependent transport systems inner membrane component3e-1582
NC_021175:881845:8818458818458833651521Streptococcus oligofermentans AS 1.3089, complete genomecholine ABC transporter permease3e-1582
NC_014121:2247913:226354522635452264255711Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein5e-1581.3
NC_018515:4196409:422021942202194220863645Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease9e-1580.1
NC_018515:4196409:422204142220414222697657Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease1e-1480.1
NC_012883:1695703:169630716963071696936630Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proW-2)2e-1479.3
NC_012526:4462:190471904719766720Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine3e-1478.6
NC_011832:1399446:139883913988391399453615Candidatus Methanosphaerula palustris E1-9c, complete genomebinding-protein-dependent transport systems inner membrane component4e-1478.2
NC_012526:4462:2070020700218811182Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine8e-1477
NC_016626:400080:401837401837402541705Burkholderia sp. YI23 plasmid byi_1p, complete sequencebinding-protein-dependent transport system inner membrane protein1e-1376.6
NC_009778:1070000:107206410720641072795732Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1376.3
NC_020260:1111130:111415211141521114883732Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehW1e-1376.3
NC_015278:538500:5586705586705602111542Aerococcus urinae ACS-120-V-Col10a chromosome, complete genometoxin-antitoxin system toxin component, PIN family7e-1373.9
NC_006347:3805500:380706738070673807891825Bacteroides fragilis YCH46, complete genomeglycine betaine/L-proline transport system permease1e-1273.6
NC_014222:1:147021470215538837Methanococcus voltae A3 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-1271.6
NC_008687:965152:989964989964990845882Paracoccus denitrificans PD1222 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component1e-1170.1
NC_015733:2581324:2584695258469525866471953Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-1168.6
NC_009792:2688747:271131327113132711945633Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-1167.8
NC_009778:1070000:1070004107000410711371134Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1066.6
NC_020207:2240115:2253560225356022552871728Enterococcus faecium NRRL B-2354, complete genomeGlycine betaine ABC transport permease OpuABC2e-1066.2
NC_002678:6061448:6061448606144860634271980Mesorhizobium loti MAFF303099, complete genomeABC transporter permease protein1e-1066.2
NC_020260:1111130:1112092111209211132251134Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehY2e-1065.9
NC_005071:588541:609012609012609926915Prochlorococcus marinus str. MIT 9313, complete genomeABC transporter,membrane component, glycine betaine/proline family2e-1065.5
NC_010510:409469:424812424812425699888Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completebinding-protein-dependent transport systems inner membrane component3e-1065.5
NC_005791:837505:858699858699859532834Methanococcus maripaludis S2, complete genomeABC-type proline/glycine betaine transport system, permease component related protein3e-1065.1
NC_015847:909938:930852930852931685834Methanococcus maripaludis XI chromosome, complete genomebinding-protein dependent transport system inner membrane protein3e-1065.1
NC_010334:4925936:492593649259364926835900Shewanella halifaxensis HAW-EB4, complete genomebinding-protein-dependent transport systems inner membrane component5e-1064.7
NC_009615:4693164:469577346957734696588816Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycine betaine/L-proline transport system permease5e-1064.7
NC_009792:2688747:271069327106932711316624Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-1064.3
NC_015556:1188500:120853012085301209429900Pseudomonas fulva 12-X chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-1064.3
NC_015733:2581324:262021326202132621145933Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-0963.5
NC_016002:2591189:260637826063782607247870Pseudogulbenkiania sp. NH8B, complete genomeABC transporter permease1e-0963.2
NC_018643:857911:8579118579118600642154Alpha proteobacterium HIMB5 chromosome, complete genomeBinding-protein-dependent transport system inner membrane component2e-0962.8
NC_008148:1567703:157570915757091576575867Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component2e-0962.8
NC_004557:2475030:247973424797342480561828Clostridium tetani E88, complete genomeputative glycine-betaine binding permease protein5e-0961.2
NC_014923:79370:856258562586512888Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completebinding-protein-dependent transport systems inner membrane component9e-0960.5
NC_019978:2036779:205052220505222051355834Halobacteroides halobius DSM 5150, complete genomeABC-type proline/glycine betaine transport system, permease component2e-0859.3
NC_009925:647752:652404652404653033630Acaryochloris marina MBIC11017, complete genomebinding-protein-dependent inner membrane transport system, putative2e-0858.9
NC_015856:3170771:317220831722083173077870Collimonas fungivorans Ter331 chromosome, complete genomealkanesulfonates transport system permease3e-0858.5
NC_008343:88184:942259422595076852Granulibacter bethesdensis CGDNIH1, complete genomeglycine betaine/L-proline transport system permease protein proW4e-0858.2
NC_006582:1138987:116018511601851161021837Bacillus clausii KSM-K16, complete genomeglycine betaine ABC transporter permease6e-0857.8
NC_010612:6385520:639888963988896399635747Mycobacterium marinum M, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ5e-0857.8
NC_014931:4985500:499939949993995000169771Variovorax paradoxus EPS chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-0857.8
NC_007492:3180480:3205029320502932071252097Pseudomonas fluorescens PfO-1, complete genomeGlycine betaine/L-proline ABC transporter, ATPase/permease fusion protein, putative5e-0857.8
NC_020133:5965500:596862759686275969373747Mycobacterium liflandii 128FXT, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ5e-0857.8
NC_004193:3578710:359297735929773593837861Oceanobacillus iheyensis HTE831, complete genomeglycine betaine ABC transporter permease9e-0857
NC_009381:1783886:1821090182109018222441155Yersinia pestis Pestoides F chromosome, complete genomeglycine betaine transporter membrane protein1e-0756.6
NC_010505:2657683:265864226586422659493852Methylobacterium radiotolerans JCM 2831, complete genomebinding-protein-dependent transport systems inner membrane component2e-0755.8
NC_011832:1148859:117477911747791175618840Candidatus Methanosphaerula palustris E1-9c, complete genomebinding-protein-dependent transport systems inner membrane component3e-0755.5
NC_015859:1898693:189869318986931899628936Corynebacterium variabile DSM 44702 chromosome, complete genomeABC transport system permease4e-0755.1
NC_008595:312861:312861312861313577717Mycobacterium avium 104, complete genomeABC transporter, permease protein4e-0755.1
NC_002944:292974:293657293657294373717Mycobacterium avium subsp. paratuberculosis K-10, complete genomeProZ4e-0755.1
NC_010085:1174917:117535611753561176114759Nitrosopumilus maritimus SCM1, complete genomebinding-protein-dependent transport systems inner membrane component4e-0755.1
NC_009634:547995:564167564167564928762Methanococcus vannielii SB chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0755.1
NC_016625:171341:186685186685187530846Burkholderia sp. YI23 chromosome 2, complete sequencehypothetical protein3e-0755.1
NC_015379:4426827:443980444398044440652849Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Glycine betaine ABC transporter, permease component4e-0754.7
NC_014659:4299552:434249543424954343310816Rhodococcus equi 103S, complete genomeABC transporter integral membrane subunit5e-0754.7
NC_010612:6385520:639963263996326400312681Mycobacterium marinum M, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW5e-0754.7
NC_020133:5965500:596795059679505968630681Mycobacterium liflandii 128FXT, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW5e-0754.7
NC_003063:304962:330953330953331756804Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-0754.3
NC_003305:1035342:105860510586051059453849Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein9e-0753.9
NC_014210:5370868:5382898538289853841271230Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,binding-protein-dependent transport systems inner membrane component1e-0653.5
NC_017075:4259460:427775342777534278523771Rubrivivax gelatinosus IL144, complete genomeABC transporter permease1e-0653.5
NC_019745:3778017:379342137934213794260840Gloeocapsa sp. PCC 7428, complete genomenitrate ABC transporter, inner membrane subunit1e-0653.1
NC_017297:3546467:354916135491613549703543Clostridium botulinum F str. 230613 chromosome, complete genomeglycine betaine/proline ABC transporter permease/substrate-binding protein2e-0652.8
NC_010002:2933909:2935066293506629362651200Delftia acidovorans SPH-1, complete genomebinding-protein-dependent transport systems inner membrane component2e-0652.8
NC_016625:171341:185846185846186688843Burkholderia sp. YI23 chromosome 2, complete sequenceABC transporter permease2e-0652.8
NC_010520:3526883:353502735350273535569543Clostridium botulinum A3 str. Loch Maree, complete genomeABC transporter, permease protein2e-0652.8
NC_009717:271385:284242284242285015774Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencebinding-protein-dependent transport systems inner membrane component2e-0652.8
NC_007952:1587500:158958115895811590483903Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC proline/glycine betaine transporter, inner membrane subunit3e-0652
NC_009921:3666898:368591536859153686760846Frankia sp. EAN1pec, complete genomebinding-protein-dependent transport systems inner membrane component4e-0651.6
NC_014507:2276000:229440522944052295202798Methanoplanus petrolearius DSM 11571 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-0651.2
NC_017179:2539031:256915025691502569779630Clostridium difficile BI1, complete genomeABC transporter permease5e-0651.2
NC_013316:2623199:264151726415172642260744Clostridium difficile R20291, complete genome5e-0651.2
NC_011000:2831183:283590528359052836732828Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transmembrane protein of ABC transporter6e-0650.8
NC_003305:1035342:105775710577571058608852Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein6e-0650.8
NC_015172:951550:955589955589956377789Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-0650.8
NC_015259:1512563:152895715289571529790834Polymorphum gilvum SL003B-26A1 chromosome, complete genomeProbable aliphatic sulfonate ABC transporter, permease protein7e-0650.8
NC_015942:63440:721447214473028885Acidithiobacillus ferrivorans SS3 chromosome, complete genomeABC transporter integral membrane subunit7e-0650.8