Pre_GI: BLASTP Hits

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Query: NC_004461:205068:214351 Staphylococcus epidermidis ATCC 12228, complete genome

Start: 214351, End: 215310, Length: 960

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a non-biofilm-forming, non-infection associated strain used for detection of residual antibiotics in food products. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Resistant to many antibiotics including penicillins and cephalosporins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011999:1567818:158383415838341584733900Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC-type transporter, substrate-binding protein4e-93341
NC_016047:3406488:342193734219373422857921Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine-binding protein2e-91335
NC_014479:3245126:326417932641793265099921Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter choline-binding lipoprotein2e-89328
NC_013921:1614397:163324716332471634161915Thermoanaerobacter italicus Ab9 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system1e-51203
NC_014209:1580423:159786515978651598779915Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Substrate-binding region of ABC-type glycine betaine transport system4e-51201
NC_015425:2528549:2560000256000025615861587Clostridium botulinum BKT015925 chromosome, complete genomeputative glycine betaine/carnitine/choline ABC transporter4e-50198
NC_014614:6115:399003990040787888Clostridium sticklandii, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system precursor1e-48193
NC_013406:5066769:510888051088805109833954Paenibacillus sp. Y412MC10 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system2e-48192
NC_016023:1143130:1143130114313011446591530Bacillus coagulans 36D1 chromosome, complete genomeglycine betaine ABC transporter periplasmic protein1e-45183
NC_014377:210888:218405218405219307903Thermosediminibacter oceani DSM 16646 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system2e-44179
NC_009792:2688747:270825827082582709139882Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-41169
NC_021175:881845:8818458818458833651521Streptococcus oligofermentans AS 1.3089, complete genomecholine ABC transporter permease2e-41169
NC_014206:345499:380665380665381567903Geobacillus sp. C56-T3 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein6e-41168
NC_009495:1759759:1776428177642817780141587Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease/substrate-binding protein6e-41168
NC_016593:353505:381669381669382571903Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeproline/glycine betaine ABC-type transport system, permease component fused to periplasmic component1e-40167
NC_006510:310212:343938343938344837900Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-40167
NC_015589:3241364:324136432413643242272909Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein2e-40166
NC_014915:308056:327886327886328788903Geobacillus sp. Y412MC52 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system3e-40166
NC_013411:1168049:118787911878791188781903Geobacillus sp. Y412MC61, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system3e-40166
NC_009328:293000:314277314277315179903Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeproline/glycine betaine ABC transporter permease/periplasmic protein3e-40166
NC_012883:1695703:169806916980691698971903Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proX)7e-38157
NC_013520:1905554:1927618192761819291501533Veillonella parvula DSM 2008, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system1e-36154
NC_009727:1899876:1899876189987619014561581Coxiella burnetii Dugway 7E9-12, complete genomeABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein1e-34147
NC_016605:50695:6941669416709451530Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesubstrate binding domain of ABC-type glycine betaine transport system family protein2e-34146
NC_007576:1854136:1854136185413618556621527Lactobacillus sakei subsp. sakei 23K, complete genomePutative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits4e-34145
NC_008525:270310:2858552858552873841530Pediococcus pentosaceus ATCC 25745, complete genomeABC-type proline/glycine betaine transport system, permease and substrate binding protein1e-33143
NC_015278:538500:5586705586705602111542Aerococcus urinae ACS-120-V-Col10a chromosome, complete genometoxin-antitoxin system toxin component, PIN family7e-33141
NC_010718:128423:144228144228145169942Natranaerobius thermophilus JW/NM-WN-LF, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system6e-32138
NC_018515:4196409:421899242189924219945954Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeglycine betaine/choline ABC transporter substrate-binding protein1e-24114
NC_014121:2247913:226427422642742265173900Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system substrate-binding protein3e-24112
NC_016626:400080:400930400930401826897Burkholderia sp. YI23 plasmid byi_1p, complete sequenceglycine betaine ABC transporter substrate-binding protein1e-23110
NC_007963:2644930:264696526469652647849885Chromohalobacter salexigens DSM 3043, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system3e-23109
NC_013745:371322:371322371322372266945Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completeSubstrate-binding region of ABC-type glycine betaine transport system5e-23108
NC_014315:2711852:2731698273169827332031506Nitrosococcus watsoni C-113 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein3e-22106
NC_007963:2644930:264793626479362648838903Chromohalobacter salexigens DSM 3043, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system1e-20100
NC_020260:1111130:111113011111301112038909Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1376.6
NC_014643:1251847:1270631127063112716381008Rothia dentocariosa ATCC 17931 chromosome, complete genomeglycine betaine/choline ABC transporter substrate-binding protein1e-1274.3
NC_012526:4462:218982189822803906Deinococcus deserti VCD115, complete genomeputative glycine betaine ABC transporter, periplasmic component2e-1170.1
NC_010612:6385520:640143064014306402377948Mycobacterium marinum M, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) binding lipoprotein ProX2e-0963.5
NC_007963:1908964:193346919334691934443975Chromohalobacter salexigens DSM 3043, complete genomeperiplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system-like protein2e-0756.6
NC_017317:134671:152773152773153612840Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein3e-0756.2