Pre_GI: BLASTP Hits

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Query: NC_004461:1:3822 Staphylococcus epidermidis ATCC 12228, complete genome

Start: 3822, End: 4937, Length: 1116

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a non-biofilm-forming, non-infection associated strain used for detection of residual antibiotics in food products. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Resistant to many antibiotics including penicillins and cephalosporins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007350:1:4036403651511116Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA repair and genetic recombination protein0649
NC_011567:1:3339333944781140Anoxybacillus flavithermus WK1, complete genomeRecombinational DNA repair ATPase RecF6e-118424
NC_018665:1:3495349546491155Exiguobacterium antarcticum B7 chromosome, complete genomeDNA replication and repair protein recF3e-108392
NC_012673:1679744:1696312169631216974301119Exiguobacterium sp. AT1b, complete genomeDNA replication and repair protein RecF5e-108391
NC_014171:1:3300330044271128Bacillus thuringiensis BMB171 chromosome, complete genomerecombination protein F5e-107387
NC_017208:1:3300330044271128Bacillus thuringiensis serovar chinensis CT-43 chromosome, completerecombination protein F1e-106386
NC_015690:8645500:2964296440701107Paenibacillus mucilaginosus KNP414 chromosome, complete genomeRecF1e-102373
NC_007929:1805000:3309330944481140Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDNA replication and repair protein4e-101368
NC_015433:1998427:2013306201330620144001095Streptococcus suis ST3 chromosome, complete genomeDNA replication and repair protein RecF2e-85316
NC_014098:3372000:3292329244041113Bacillus tusciae DSM 2912 chromosome, complete genomeDNA replication and repair protein RecF3e-79295
NC_010718:1:3167316743271161Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA replication and repair protein RecF1e-73276
NC_014152:1:3018301841241107Thermincola sp. JR, complete genomeDNA replication and repair protein RecF5e-70265
NC_018664:1:3163316342841122Clostridium acidurici 9a chromosome, complete genomeDNA replication and repair protein RecF3e-70265
NC_009922:1:3236323643331098Alkaliphilus oremlandii OhILAs, complete genomeDNA replication and repair protein RecF3e-70265
NC_014378:525717:3311331144351125Acetohalobium arabaticum DSM 5501 chromosome, complete genomeDNA replication and repair protein RecF6e-70264
NC_014378:4428:3311331144351125Acetohalobium arabaticum DSM 5501 chromosome, complete genomeDNA replication and repair protein RecF6e-70264
NC_004557:32094:4842548425495371113Clostridium tetani E88, complete genomerecombination protein F2e-68259
NC_008261:1:3567356746521086Clostridium perfringens ATCC 13124, complete genomeDNA replication and repair protein RecF2e-67256
NC_003366:1:3566356646511086Clostridium perfringens str. 13, complete genomerecombination protein F2e-67256
NC_008262:1:3391339144761086Clostridium perfringens SM101, complete genomeDNA replication and repair protein RecF2e-67256
NC_020291:1:3133313342151083Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA replication and repair protein RecF1e-67256
NC_009706:1:3033303341271095Clostridium kluyveri DSM 555 chromosome, complete genomerecombination protein F2e-66253
NC_008593:2527064:2543402254340225444871086Clostridium novyi NT, complete genomerecF protein2e-66252
NC_011837:1:3024302441271104Clostridium kluyveri NBRC 12016, complete genomerecombination protein F2e-66252
NC_006177:3549467:2948294840751128Symbiobacterium thermophilum IAM 14863, complete genomeDNA repair and genetic recombination protein7e-66251
NC_014654:1:3111311142321122Halanaerobium sp. 'sapolanicus' chromosome, complete genomeDNA replication and repair protein RecF7e-66251
NC_015275:1:3052305241341083Clostridium lentocellum DSM 5427 chromosome, complete genomeDNA replication and repair protein RecF1e-65250
NC_015425:2752482:2768847276884727699291083Clostridium botulinum BKT015925 chromosome, complete genomeDNA replication and repair protein RecF2e-65249
NC_015565:2879603:2945294540481104Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA replication and repair protein recF2e-65249
NC_010001:1:3870387049521083Clostridium phytofermentans ISDg, complete genomeDNA replication and repair protein RecF4e-65248
NC_010516:1:3035303541291095Clostridium botulinum B1 str. Okra, complete genomeDNA replication and repair protein RecF2e-64246
NC_010520:1:3012301241061095Clostridium botulinum A3 str. Loch Maree, complete genomeDNA replication and repair protein RecF2e-64246
NC_012563:1:3164316442581095Clostridium botulinum A2 str. Kyoto, complete genomeDNA replication and repair protein RecF2e-64246
NC_009697:1:3007300741011095Clostridium botulinum A str. ATCC 19397 chromosome, completerecombination protein F2e-64246
NC_009698:1:3007300741011095Clostridium botulinum A str. Hall chromosome, complete genomerecombination protein F2e-64246
NC_009495:1:2998299841011104Clostridium botulinum A str. ATCC 3502 chromosome, complete genomerecombination protein F2e-64246
NC_015687:1:3447344745381092Clostridium acetobutylicum DSM 1731 chromosome, complete genomerecombination protein F2e-64246
NC_003030:1:3447344745381092Clostridium acetobutylicum ATCC 824, complete genomerecombination protein F2e-64246
NC_012658:1:3171317142651095Clostridium botulinum Ba4 str. 657 chromosome, complete genomerecombination protein F4e-64245
NC_010674:1:3223322343081086Clostridium botulinum B str. Eklund 17B, complete genomeDNA replication and repair protein RecF6e-64244
NC_017297:1:3008300841021095Clostridium botulinum F str. 230613 chromosome, complete genomeDNA replication and repair protein RecF1e-63243
NC_009699:1:3008300841021095Clostridium botulinum F str. Langeland chromosome, complete genomerecombination protein F1e-63243
NC_010723:1:3175317542601086Clostridium botulinum E3 str. Alaska E43, complete genomeDNA replication and repair protein RecF3e-63242
NC_014393:1:3443344345371095Clostridium cellulovorans 743B chromosome, complete genomeDNA replication and repair protein RecF7e-63241
NC_012781:4065:2984298440721089Eubacterium rectale ATCC 33656, complete genomeDNA replication and repair protein RecF6e-63241
NC_012778:2997:2997299740881092Eubacterium eligens ATCC 27750, complete genomeDNA replication and repair protein RecF6e-63241
NC_014328:1:3117311742171101Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative DNA replication and repair protein RecF1e-62240
NC_009089:1:3029302941441116Clostridium difficile 630, complete genomeDNA replication and repair protein2e-61236
NC_021182:1:3446344645461101Clostridium pasteurianum BC1, complete genomerecF protein6e-56218
NC_011979:4293859:2952295240461095Geobacter sp. FRC-32, complete genomeDNA replication and repair protein RecF4e-55215
NC_013895:66641:9426494264954121149Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeputative recombination protein F2e-47190
NC_015519:2739347:3080308041741095Tepidanaerobacter sp. Re1 chromosome, complete genomeDNA replication and repair protein recF2e-47189
NC_007644:3229:3229322943411113Moorella thermoacetica ATCC 39073, complete genomeDNA replication and repair protein RecF4e-47189
NC_021184:1:3375337544751101Desulfotomaculum gibsoniae DSM 7213, complete genomerecF protein6e-47188
NC_015953:3684065:3687060368706036881901131Streptomyces sp. SirexAA-E chromosome, complete genomeDNA replication and repair protein RecF2e-45183
NC_008578:2431074:3097309742121116Acidothermus cellulolyticus 11B, complete genomeDNA replication and repair protein RecF5e-45182
NC_014210:5752651:5627562767601134Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA replication and repair protein RecF2e-45182
NC_007333:3626510:4988498861211134Thermobifida fusca YX, complete genomerecombination protein F2e-44179
NC_007333:1:4988498861211134Thermobifida fusca YX, complete genomerecombination protein F2e-44179
NC_010814:4099:2996299641021107Geobacter lovleyi SZ, complete genomeDNA replication and repair protein RecF6e-44178
NC_013929:5135285:5135285513528551364091125Streptomyces scabiei 87.22 chromosome, complete genomeDNA replication protein5e-43175
NC_003888:4251867:4266442426644242675631122Streptomyces coelicolor A3(2), complete genomerecombination protein F4e-43175
NC_007677:71532:7153271532727701239Salinibacter ruber DSM 13855, complete genomeDNA replication and repair protein RecF4e-42172
NC_014623:723089:7230897230897245341446Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA replication and repair protein RecF2e-41170
NC_015052:2383865:3391339146291239Bifidobacterium longum subsp. infantis 157F, complete genomerecombination protein RecF3e-41169
NC_014656:1634397:1637135163713516383731239Bifidobacterium longum subsp. longum BBMN68 chromosome, completerecf3e-41169
NC_017221:2268276:2268743226874322699811239Bifidobacterium longum subsp. longum KACC 91563 chromosome,recombination protein RecF3e-41169
NC_014032:71724:7172471724729621239Salinibacter ruber M8 chromosome, complete genomeDNA replication and repair protein RecF2e-41169
NC_013171:1:3184318442631080Anaerococcus prevotii DSM 20548, complete genomeDNA replication and repair protein RecF5e-41168
NC_014151:4106624:4593459357891197Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA replication and repair protein RecF1e-40167
NC_014550:3839389:3442344246051164Arthrobacter arilaitensis Re117, complete genomeDNA replication and repair protein RecF3e-40166
NC_018750:3964784:3967638396763839687591122Streptomyces venezuelae ATCC 10712, complete genomeDNA recombination and repair protein RecF3e-40166
NC_015389:2101841:4395439555221128Coriobacterium glomerans PW2 chromosome, complete genomeDNA replication and repair protein RecF2e-40166
NC_014220:2398334:2716271638221107Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDNA replication and repair protein RecF8e-40164
NC_013093:1:4728472858431116Actinosynnema mirum DSM 43827, complete genomeDNA replication and repair protein RecF9e-40164
NC_014318:3691:4592459257461155Amycolatopsis mediterranei U32 chromosome, complete genomeDNA replication and repair protein RecF2e-38160
NC_017186:3694:4592459257461155Amycolatopsis mediterranei S699 chromosome, complete genomerecombination protein F2e-38160
NC_014761:1981435:1996460199646019974941035Oceanithermus profundus DSM 14977 chromosome, complete genomeDNA replication and repair protein recf4e-38159
NC_011060:3000067:2883288339921110Pelodictyon phaeoclathratiforme BU-1, complete genomeDNA replication and repair protein RecF6e-38158
NC_007498:3655304:2856285639471092Pelobacter carbinolicus DSM 2380, complete genomeDNA replication and repair protein1e-37157
NC_015312:1:4026402651681143Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA replication and repair protein recF2e-37156
NC_011059:1:2893289340051113Prosthecochloris aestuarii DSM 271, complete genomeDNA replication and repair protein RecF2e-37156
NC_012803:3691:3691369149051215Micrococcus luteus NCTC 2665, complete genomeDNA replication and repair protein RecF3e-37155
NC_013165:3146000:2840284039701131Slackia heliotrinireducens DSM 20476, complete genomerecF protein7e-37154
NC_010816:1660066:1662804166280416639911188Bifidobacterium longum DJO10A, complete genomeRecombinational DNA repair ATPase4e-36152
NC_015067:2371428:3442344246291188Bifidobacterium longum subsp. longum JCM 1217, complete genomerecombination protein RecF4e-36152
NC_004307:1620500:1621137162113716223241188Bifidobacterium longum NCC2705, complete genomerecombination protein RecF4e-36152
NC_014218:4424:3195319544271233Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeDNA replication and repair protein RecF4e-36152
NC_011886:4376261:4290429054981209Arthrobacter chlorophenolicus A6, complete genomeDNA replication and repair protein RecF7e-36151
NC_002932:2142000:2153826215382621549321107Chlorobium tepidum TLS, complete genomerecombination/replication protein RecF1e-35150
NC_013204:3613824:4350435056121263Eggerthella lenta DSM 2243, complete genomeDNA replication and repair protein RecF2e-35150
NC_015145:4232283:4506450657171212Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDNA replication and repair protein RecF4e-35149
NC_013521:4240468:4478447857221245Sanguibacter keddieii DSM 10542, complete genomeDNA replication and repair protein RecF3e-35149
NC_006087:1:4160416053171158Leifsonia xyli subsp. xyli str. CTCB07, complete genomerecombination protein F3e-35149
NC_008541:4679022:4061406152661206Arthrobacter sp. FB24 chromosome 1, complete sequenceDNA replication and repair protein RecF7e-35148
NC_013595:10329633:5885588570571173Streptosporangium roseum DSM 43021, complete genomeRecombinational DNA repair ATPase (RecF pathway)- like protein2e-34147
NC_013170:1:2977297741131137Cryptobacterium curtum DSM 15641, complete genomerecF protein9e-35147
NC_014830:4012999:5015501562891275Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA replication and repair protein RecF5e-34145
NC_015846:1065692:1064602106460210657051104Capnocytophaga canimorsus Cc5 chromosome, complete genomeDNA replication and repair protein recF1e-33144
NC_008711:4579997:4132413253311200Arthrobacter aurescens TC1, complete genomeputative DNA replication and repair protein RecF1e-33144
NC_014363:2035141:2043220204322020443081089Olsenella uli DSM 7084 chromosome, complete genomeDNA replication and repair protein RecF2e-33143
NC_015564:4727630:3572357247651194Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeDNA replication and repair protein recF8e-33141
NC_014221:169996:1925671925671936251059Truepera radiovictrix DSM 17093 chromosome, complete genomeDNA replication and repair protein RecF2e-32139
NC_014392:2513529:5071507161321062Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeDNA replication and repair protein RecF5e-32139
NC_015501:1669521:1685231168523116863461116Porphyromonas asaccharolytica DSM 20707 chromosome, completeDNA replication and repair protein recF7e-31135
NC_002677:1:3281328144381158Mycobacterium leprae TN, complete genomerecombination protein F4e-31135
NC_002677:3253057:3281328144381158Mycobacterium leprae TN, complete genomerecombination protein F4e-31135
NC_011896:3252925:3281328144381158Mycobacterium leprae Br4923, complete genomeputative DNA replication and SOS induction protein4e-31135
NC_011896:1:3281328144381158Mycobacterium leprae Br4923, complete genomeputative DNA replication and SOS induction protein4e-31135
NC_015703:6295500:6314430631443063155301101Runella slithyformis DSM 19594 chromosome, complete genomeDNA replication and repair protein recF3e-31135
NC_013510:1:5315531564541140Thermomonospora curvata DSM 43183, complete genomeDNA replication and repair protein RecF2e-30133
NC_007164:2446879:3596359648731278Corynebacterium jeikeium K411, complete genomeDNA replication and repair protein RecF2e-30133
NC_011297:1357947:1376151137615113772301080Dictyoglomus thermophilum H-6-12, complete genomeDNA replication and repair protein RecF4e-29129
NC_015436:1:2895289539741080Spirochaeta coccoides DSM 17374 chromosome, complete genomeDNA replication and repair protein recF6e-29128
NC_014039:2479500:4202420254071206Propionibacterium acnes SK137 chromosome, complete genomeDNA recombination and repair protein RecF8e-29128
NC_008817:1538507:154529715452971546274978Prochlorococcus marinus str. MIT 9515, complete genomeputative DNA repair and genetic recombination protein RecF9e-29127
NC_006085:2544421:4227422754111185Propionibacterium acnes KPA171202, complete genomerecombination protein F1e-28127
NC_014836:2919508:2792279238231032Desulfurispirillum indicum S5 chromosome, complete genomeDNA replication and repair protein RecF7e-28125
NC_011661:1542335:1560523156052315616021080Dictyoglomus turgidum DSM 6724, complete genomeDNA replication and repair protein RecF2e-27123
NC_004337:3590323:3871536387153638726091074Shigella flexneri 2a str. 301, complete genomerecombination protein F9e-27121
NC_014150:1099507:1104826110482611058931068Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA replication and repair protein RecF7e-26118
NC_010577:1:3044304441381095Xylella fastidiosa M23, complete genomeDNA replication and repair protein RecF2e-24113
NC_010577:2513241:3044304441381095Xylella fastidiosa M23, complete genomeDNA replication and repair protein RecF2e-24113
NC_004556:1:3153315342471095Xylella fastidiosa Temecula1, complete genomerecombination protein F2e-24113
NC_002516:6255854:3169316942781110Pseudomonas aeruginosa PAO1, complete genomerecombination protein F6e-24112
NC_010322:1:3844384449471104Pseudomonas putida GB-1 chromosome, complete genomerecombination protein F6e-24112
NC_020260:3931567:3931567393156739326401074Cronobacter sakazakii Sp291, complete genomerecombination protein F1e-23111
NC_015673:1:3542354249721431Corynebacterium resistens DSM 45100 chromosome, complete genomeDNA replication and repair protein8e-24111
NC_009512:1:3062306241651104Pseudomonas putida F1, complete genomeDNA replication and repair protein RecF4e-23109
NC_015714:1:2702270238351134Treponema paraluiscuniculi Cuniculi A chromosome, complete genomerecombination protein F4e-23108
NC_002947:8394:1222212222133251104Pseudomonas putida KT2440, complete genomerecombination protein F4e-23108
NC_008576:4701930:2711271138591149Magnetococcus sp. MC-1, complete genomeDNA replication and repair protein RecF8e-23108
NC_020829:1:2679267937881110Pseudomonas denitrificans ATCC 13867, complete genomerecombination protein F8e-23108
NC_002488:2657274:3161316142551095Xylella fastidiosa 9a5c, complete genomerecombination protein F2e-22107
NC_002488:1:3161316142551095Xylella fastidiosa 9a5c, complete genomerecombination protein F2e-22107
NC_016842:1:2701270138341134Treponema pallidum subsp. pertenue str. SamoaD chromosome, completerecombination protein F1e-22107
NC_016843:1:2701270138341134Treponema pallidum subsp. pertenue str. Gauthier chromosome,recombination protein F1e-22107
NC_017268:1:2761276138341074Treponema pallidum subsp. pallidum str. Chicago chromosome,DNA replication and repair protein RecF1e-22107
NC_020209:4768500:4771601477160147727041104Pseudomonas poae RE*1-1-14, complete genomerecombination protein F1e-22107
NC_010501:1:3081308141841104Pseudomonas putida W619, complete genomeDNA replication and repair protein RecF3e-22106
NC_012560:5338707:2688268837851098Azotobacter vinelandii DJ, complete genomeDNA replication and repair protein ,RecF7e-22105
NC_009446:174951:2169122169122179821071Dichelobacter nodosus VCS1703A, complete genomeDNA replication and repair protein RecF8e-22104
NC_014315:3319865:95019501105891089Nitrosococcus watsoni C-113 chromosome, complete genomeDNA replication and repair protein RecF2e-21103
NC_015572:1:2684268437571074Methylomonas methanica MC09 chromosome, complete genomeDNA replication and repair protein recF1e-20100
NC_019907:46994:6656866568677011134Liberibacter crescens BT-1 chromosome, complete genomeDNA recombination and repair protein RecF1e-1894.4
NC_017278:258921:2839422839422849731032Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein3e-1893.2
NC_012985:465354:4962314962314973581128Candidatus Liberibacter asiaticus str. psy62, complete genomerecombination protein F1e-1791.3
NC_009092:4585784:2684268437661083Shewanella loihica PV-4, complete genomeDNA replication and repair protein RecF1e-1790.9
NC_010611:3879190:3027302741091083Acinetobacter baumannii ACICU, complete genomeRecombinational DNA repair ATPase (RecF pathway)2e-1687
NC_005956:152497:1616811616811628141134Bartonella henselae str. Houston-1, complete genomerecombination protein F6e-1479
NC_015709:1769806:1769806176980617709511146Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeDNA replication and repair protein RecF1e-1377.8
NC_017043:735150:7544397544397555211083Rickettsia montanensis str. OSU 85-930 chromosome, complete genomerecombination protein F2e-1377.4
NC_016915:13927:3506235062361441083Rickettsia rickettsii str. Hlp#2 chromosome, complete genomerecombination protein F2e-1273.9
NC_010263:13826:3501135011360931083Rickettsia rickettsii str. Iowa, complete genomeDNA replication and repair protein2e-1273.6
NC_009882:13826:3501935019361011083Rickettsia rickettsii str. 'Sheila Smith', complete genomerecombination protein F2e-1273.6
NC_016908:13826:3502135021361031083Rickettsia rickettsii str. Colombia chromosome, complete genomerecombination protein F2e-1273.6
NC_016909:16465:3501335013360951083Rickettsia rickettsii str. Arizona chromosome, complete genomerecombination protein F2e-1273.6
NC_016911:13826:3501035010360921083Rickettsia rickettsii str. Hauke chromosome, complete genomerecombination protein F2e-1273.6
NC_016914:13826:3509835098361801083Rickettsia rickettsii str. Hino chromosome, complete genomerecombination protein F2e-1273.6
NC_012633:12000:3240632406334881083Rickettsia africae ESF-5, complete genomeDNA replication and repair protein RecF3e-1273.2
NC_016931:38350:5708057080581621083Rickettsia massiliae str. AZT80 chromosome, complete genomerecombination protein F3e-1273.2
NC_016639:13188:3575435754368361083Rickettsia slovaca 13-B chromosome, complete genomeDNA replication and repair protein RecF5e-1272.4
NC_017065:13188:3575135751368331083Rickettsia slovaca str. D-CWPP chromosome, complete genomerecombination protein F5e-1272.4
NC_016930:11721:3330333303343851083Rickettsia philipii str. 364D chromosome, complete genomerecombination protein F5e-1272.4
NC_020300:131782:1412031412031423451143Bartonella australis Aust/NH1, complete genomerecombination protein F7e-1272
NC_005955:139907:1491031491031502361134Bartonella quintana str. Toulouse, complete genomerecombination protein F9e-1064.7
NC_014006:850763:9037189037189047881071Sphingobium japonicum UT26S chromosome 1, complete genomeDNA replication and repair protein RecF5e-0962.4
NC_007797:1451804:1468308146830814694231116Anaplasma phagocytophilum HZ, complete genomeputative DNA replication and repair protein RecF7e-0652