Pre_GI: BLASTP Hits

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Query: NC_004460:708416:712464 Vibrio vulnificus CMCP6 chromosome II, complete sequence

Start: 712464, End: 714557, Length: 2094

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Pathogen in immunocompromised patients. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD0706
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD2e-110400
NC_009787:17344:4718471869492232Escherichia coli E24377A plasmid pETEC_35, complete sequencetype IV conjugative transfer system coupling protein TraD2e-104380
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence6e-103375
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein8e-103375
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein3e-96353
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG1e-63245
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-61237
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-60234
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein2e-59230
NC_009488:89844:1125211125211142781758Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-59230
NC_017044:702483:7220847220847237781695Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugative transfer protein TraD4e-59229
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD5e-58226
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD5e-58226
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD5e-58226
NC_010606:25090:2655826558287172160Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceType IV secretory pathway, VirD4 component3e-53210
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD3e-51203
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD1e-47192
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-46188
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD1e-45185
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein1e-43178
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-41171
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-41171
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-41170
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-41170
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-41170
NC_009488:854500:857766857766858722957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-41169
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein3e-40167
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein3e-40167
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD41e-39165
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD5e-39163
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein4e-38160
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD1e-37158
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein5e-37156
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system1e-34148
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB3e-34147
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD43e-31137
NC_011916:467106:4915124915124933291818Caulobacter crescentus NA1000 chromosome, complete genomeconjugation protein, ATP binding domain trwB1e-30135
NC_017044:702483:719163719163719666504Rickettsia parkeri str. Portsmouth chromosome, complete genomeputative conjugative transfer protein TraD2e-28128
NC_020453:3950838:3988683398868339904941812Agromonas oligotrophica S58 DNA, complete genomeputative type IV secretory pathway VirD4 components1e-21105
NC_009488:1430693:143360714336071434488882Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein2e-21104
NC_015850:1006980:1013904101390410157931890Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein7e-1789.7
NC_010943:3069082:3098061309806130999351875Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretory protein conjugation protein TraD4e-1687
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components9e-1685.9
NC_011729:2732163:2747512274751227492211710Cyanothece sp. PCC 7424 chromosome, complete genometransfer complex protein TrsK-like protein1e-0862.8
NC_009931:117904:1293991293991311741776Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencehypothetical protein3e-0757.4