Pre_GI: BLASTP Hits

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Query: NC_004432:936500:943651 Mycoplasma penetrans HF-2, complete genome

Start: 943651, End: 943932, Length: 282

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:5083949:511172251117225112027306Escherichia coli O111:H- str. 11128, complete genomePTS system L-ascorbate-specific transporter subunit IIB UlaB1e-1168.6
NC_014921:22828:291252912529361237Mycoplasma fermentans M64 chromosome, complete genomepentitol phosphotransferase enzyme ii, b component2e-1064.7
NC_003210:2721559:272288427228842723156273Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1064.3
NC_014376:2766326:277177027717702772045276Clostridium saccharolyticum WM1 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit4e-0960.1
NC_014831:2201246:221381922138192214118300Thermaerobacter marianensis DSM 12885 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit7e-0959.3
NC_009617:3184924:318492431849243185208285Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphotransferase system, lactose/cellobiose-specific IIB subunit3e-0857.4
NC_020181:969599:975575975575975841267Enterobacter aerogenes EA1509E, complete genomeFIG01225319: hypothetical protein2e-0857.4
NC_015663:4447984:446125044612504461516267Enterobacter aerogenes KCTC 2190 chromosome, complete genomeascorbate-specific PTS family enzyme IIB component2e-0857.4
NC_014228:2812000:283069528306952830982288Xenorhabdus nematophila ATCC 19061, complete genomeputative sugar phosphotransferase component II B3e-0857
NC_013850:2685835:269188326918832692149267Klebsiella variicola At-22 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-0856.6
NC_009648:1914621:192832219283221928588267Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomePTS family protein II component5e-0856.2
NC_012731:2650603:266430226643022664568267Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeascorbate-specific PTS family enzyme IIB component5e-0856.2
NC_016845:2691129:270484927048492705115267Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,PTS family protein II component5e-0856.2
NC_004431:279868:307212307212307499288Escherichia coli CFT073, complete genomehypothetical protein1e-0755.5
NC_015224:3225000:322552132255213225808288Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phosphotransferase enzyme II, B component6e-0752.8
NC_008800:1459015:148022214802221480509288Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phosphotransferase enzyme II, B component7e-0752.8
NC_015637:669593:6695936695936714371845Vibrio anguillarum 775 chromosome chromosome II, complete sequencePTS system, 3-keto-L-gulonate specific IIB2e-0651.2
NC_012880:135508:1355081355081372711764Dickeya dadantii Ech703, complete genomeputative sugar-specific permease SgaT/UlaA2e-0651.2
NC_012912:325913:3453263453263470711746Dickeya zeae Ech1591, complete genomeputative sugar-specific permease SgaT/UlaA2e-0651.2
NC_013411:2975364:298698829869882987272285Geobacillus sp. Y412MC61, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit3e-0650.4
NC_014915:2092678:212691921269192127203285Geobacillus sp. Y412MC52 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit3e-0650.4
NC_015425:641000:660238660238660543306Clostridium botulinum BKT015925 chromosome, complete genomePTS system transporter subunit IIB4e-0650.1