Pre_GI: BLASTP Hits

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Query: NC_004432:80780:96789 Mycoplasma penetrans HF-2, complete genome

Start: 96789, End: 97181, Length: 393

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017351:2335753:233575323357532336145393Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete30S ribosomal protein S99e-30128
NC_014171:109280:146488146488146880393Bacillus thuringiensis BMB171 chromosome, complete genome30S ribosomal protein S91e-29128
NC_017208:108134:148536148536148928393Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete30S ribosomal protein S91e-29128
NC_002951:2288674:228867422886742289072399Staphylococcus aureus subsp. aureus COL, complete genomeribosomal protein S99e-30128
NC_007622:2239799:223979922397992240197399Staphylococcus aureus RF122, complete genome30S ribosomal protein S99e-30128
NC_002745:2289829:228982922898292290221393Staphylococcus aureus subsp. aureus N315, complete genome30S ribosomal protein S99e-30128
NC_002758:2359329:235932923593292359721393Staphylococcus aureus subsp. aureus Mu50, complete genome30S ribosomal protein S99e-30128
NC_003923:2301234:230123423012342301632399Staphylococcus aureus subsp. aureus MW2, complete genome30S ribosomal protein S99e-30128
NC_010079:2352691:235269123526912353089399Staphylococcus aureus subsp. aureus USA300_TCH1516, completeribosomal protein S99e-30128
NC_017347:2350802:235080223508022351194393Staphylococcus aureus subsp. aureus T0131 chromosome, complete30S ribosomal protein S99e-30128
NC_017343:2212780:221278022127802213172393Staphylococcus aureus subsp. aureus ECT-R 2, complete genome30S ribosomal protein S9 (BS10)9e-30128
NC_017342:1012555:103759410375941037992399Staphylococcus aureus subsp. aureus TCH60 chromosome, complete30S ribosomal protein S99e-30128
NC_017341:2384736:238473623847362385134399Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,30S ribosomal protein S99e-30128
NC_016912:2170615:217061521706152171007393Staphylococcus aureus subsp. aureus VC40 chromosome, complete30S ribosomal protein S99e-30128
NC_007795:2299327:229932722993272299725399Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal protein S9, putative9e-30128
NC_018665:139646:143476143476143868393Exiguobacterium antarcticum B7 chromosome, complete genome30S ribosomal protein S93e-29127
NC_013316:120759:126015126015126407393Clostridium difficile R20291, complete genome30S ribosomal protein S93e-29127
NC_009089:117980:122268122268122660393Clostridium difficile 630, complete genome30S ribosomal protein S93e-29127
NC_009012:2100000:210358021035802103972393Clostridium thermocellum ATCC 27405, complete genomeribosomal protein S93e-29126
NC_020164:701151:725900725900726292393Staphylococcus warneri SG1, complete genome30S ribosomal protein S93e-29126
NC_006908:291539:295628295628296020393Mycoplasma mobile 163K, complete genome30S ribosomal protein S96e-29125
NC_004557:2711702:272817127281712728563393Clostridium tetani E88, complete genome30S ribosomal protein S99e-29125
NC_010556:141374:143536143536143928393Exiguobacterium sibiricum 255-15, complete genomeribosomal protein S91e-28125
NC_015737:664999:681046681046681441396Clostridium sp. SY8519, complete genome30S ribosomal protein S91e-28125
NC_004193:119737:160222160222160614393Oceanobacillus iheyensis HTE831, complete genome30S ribosomal protein S92e-28124
NC_013921:1977444:199247219924721992864393Thermoanaerobacter italicus Ab9 chromosome, complete genomeribosomal protein S92e-28124
NC_014209:1910109:192514319251431925535393Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein S92e-28124
NC_012673:1540000:155689015568901557282393Exiguobacterium sp. AT1b, complete genomeribosomal protein S94e-28123
NC_014220:2239594:224143022414302241822393Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeribosomal protein S95e-28122
NC_017297:3787191:378911337891133789505393Clostridium botulinum F str. 230613 chromosome, complete genome30S ribosomal protein S95e-28122
NC_009698:3553365:356081835608183561210393Clostridium botulinum A str. Hall chromosome, complete genome30S ribosomal protein S95e-28122
NC_009697:3659834:366370936637093664101393Clostridium botulinum A str. ATCC 19397 chromosome, complete30S ribosomal protein S95e-28122
NC_015958:2251619:227565222756522276044393Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome30S ribosomal protein S91e-27121
NC_007929:1463295:147790614779061478298393Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSSU ribosomal protein S9P4e-27120
NC_014964:388458:433147433147433539393Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete30S ribosomal protein S93e-27120
NC_014538:1975385:199052319905231990915393Thermoanaerobacter sp. X513 chromosome, complete genome30S ribosomal protein S93e-27120
NC_010320:918532:923669923669924061393Thermoanaerobacter sp. X514 chromosome, complete genome30S ribosomal protein S93e-27120
NC_010321:429720:437731437731438123393Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete30S ribosomal protein S93e-27120
NC_007350:692041:717211717211717603393Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,30S ribosomal protein S92e-27120
NC_015555:327562:371960371960372352393Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeribosomal protein S94e-27119
NC_014328:4387303:442673244267324427124393Clostridium ljungdahlii ATCC 49587 chromosome, complete genome30S ribosomal protein S95e-27119
NC_014377:112992:146417146417146806390Thermosediminibacter oceani DSM 16646 chromosome, complete genomeSSU ribosomal protein S9P3e-26117
NC_019970:336472:403276403276403668393Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosomal protein S93e-26117
NC_014410:403776:448156448156448548393Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ribosomal protein S93e-26117
NC_010723:223935:271329271329271721393Clostridium botulinum E3 str. Alaska E43, complete genomeribosomal protein S93e-26117
NC_003366:2731995:273199527319952732387393Clostridium perfringens str. 13, complete genome30S ribosomal protein S92e-26117
NC_014727:368698:374060374060374455396Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,30S ribosomal protein s92e-26117
NC_020134:301500:309379309379309771393Clostridium stercorarium subsp. stercorarium DSM 8532, complete30S ribosomal protein S91e-25114
NC_016584:233486:253905253905254300396Desulfosporosinus orientis DSM 765 chromosome, complete genome30S ribosomal protein S93e-25114
NC_012470:258287:264405264405264797393Streptococcus equi subsp. zooepidemicus, complete genome30S ribosomal protein S96e-25112
NC_010718:237962:239329239329239727399Natranaerobius thermophilus JW/NM-WN-LF, complete genomeSSU ribosomal protein S9P2e-24111
NC_016048:751000:752822752822753226405Oscillibacter valericigenes Sjm18-20, complete genome30S ribosomal protein S92e-24111
NC_015391:2523451:252887025288702529262393Carnobacterium sp. 17-4 chromosome, complete genome30S ribosomal protein S93e-24110
NC_020995:3300751:331538533153853315777393Enterococcus casseliflavus EC20, complete genome30S ribosomal protein S92e-24110
NC_013771:1171251:119153611915361191946411Cyanobacterium UCYN-A, complete genomeSSU ribosomal protein S9P1e-23108
NC_013161:212941:216780216780217187408Cyanothece sp. PCC 8802, complete genomeribosomal protein S95e-23106
NC_011726:213956:217795217795218202408Cyanothece sp. PCC 8801, complete genomeribosomal protein S95e-23106
NC_009785:387910:390952390952391344393Streptococcus gordonii str. Challis substr. CH1, complete genomeribosomal protein S92e-22104
NC_015519:197836:232533232533232922390Tepidanaerobacter sp. Re1 chromosome, complete genome30S ribosomal protein S92e-22104
NC_010546:4144449:416534141653414165754414Cyanothece sp. ATCC 51142 chromosome circular, complete sequence30S ribosomal protein S98e-22102
NC_014666:7641060:764286776428677643274408Frankia sp. EuI1c chromosome, complete genomeribosomal protein S97e-22102
NC_014501:5471984:548035654803565480769414Cyanothece sp. PCC 7822 chromosome, complete genome30S ribosomal protein S92e-21100
NC_019771:4459000:448008244800824480498417Anabaena cylindrica PCC 7122, complete genomeSSU ribosomal protein S9P2e-21100
NC_015953:4385419:442588544258854426412528Streptomyces sp. SirexAA-E chromosome, complete genome30S ribosomal protein S93e-21100
NC_007516:347824:362773362773363174402Synechococcus sp. CC9605, complete genome30S ribosomal protein S97e-2199.4
NC_013716:4824541:484556448455644845956393Citrobacter rodentium ICC168, complete genome30S ribosomal subunit protein S98e-2199
NC_003155:5987000:600631560063156006836522Streptomyces avermitilis MA-4680, complete genomeribosomal protein S98e-2199
NC_018750:4728870:475549747554974756009513Streptomyces venezuelae ATCC 10712, complete genomeSSU ribosomal protein S9p1e-2098.6
NC_008820:2027977:204900920490092049416408Prochlorococcus marinus str. MIT 9303, complete genome30S ribosomal protein S99e-2198.6
NC_005070:1978000:197848419784841978885402Synechococcus sp. WH 8102, complete genome30S ribosomal protein S91e-2098.2
NC_007577:1517000:152407115240711524481411Prochlorococcus marinus str. MIT 9312, complete genome30S ribosomal protein S92e-2097.8
NC_013174:650986:657718657718658209492Jonesia denitrificans DSM 20603, complete genomeribosomal protein S92e-2097.8
NC_003888:5114147:514793751479375148449513Streptomyces coelicolor A3(2), complete genome30S ribosomal protein S93e-2097.4
NC_013929:4136742:414039141403914140918528Streptomyces scabiei 87.22 chromosome, complete genome30S ribosomal protein S92e-2097.4
NC_014218:1485568:148556814855681486053486Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal protein S93e-2097.1
NC_009840:1485383:155430115543011554711411Prochlorococcus marinus str. MIT 9215, complete genome30S ribosomal protein S93e-2097.1
NC_015145:2942500:295390829539082954411504Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome30S ribosomal protein S9P3e-2097.1
NC_012490:2067246:208755920875592088071513Rhodococcus erythropolis PR4, complete genome30S ribosomal protein S95e-2096.3
NC_009091:1423677:145744114574411457851411Prochlorococcus marinus str. MIT 9301, complete genome30S ribosomal protein S95e-2096.3
NC_008816:1476209:148378714837871484197411Prochlorococcus marinus str. AS9601, complete genome30S ribosomal protein S95e-2096.3
NC_011886:2950411:296486429648642965370507Arthrobacter chlorophenolicus A6, complete genomeribosomal protein S98e-2095.5
NC_012560:1260031:126953612695361269928393Azotobacter vinelandii DJ, complete genome30S ribosomal protein S91e-1995.1
NC_021150:1258780:126954812695481269940393Azotobacter vinelandii CA6, complete genome30S ribosomal protein S91e-1995.1
NC_013721:276717:279610279610280098489Gardnerella vaginalis 409-05, complete genomeribosomal protein S91e-1995.1
NC_008817:1476473:151441915144191514829411Prochlorococcus marinus str. MIT 9515, complete genome30S ribosomal protein S91e-1994.7
NC_016109:3525588:352813135281313528637507Kitasatospora setae KM-6054, complete genome30S ribosomal protein S94e-1993.6
NC_008541:3282415:328842332884233288929507Arthrobacter sp. FB24 chromosome 1, complete sequenceribosomal protein S93e-1993.6
NC_005072:1458799:147288514728851473295411Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete30S ribosomal protein S96e-1992.8
NC_014165:597000:652042652042652563522Thermobispora bispora DSM 43833 chromosome, complete genome30S ribosomal protein S98e-1992.4
NC_009434:1156834:117195411719541172346393Pseudomonas stutzeri A1501, complete genome30S ribosomal protein S98e-1992.4
NC_015740:1017000:103146710314671031859393Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete30S ribosomal protein S91e-1892
NC_014150:1123570:114288111428811143279399Brachyspira murdochii DSM 12563 chromosome, complete genomeribosomal protein S92e-1891.3
NC_018697:2055725:206058920605892060981393Cycloclasticus sp. P1 chromosome, complete genomeribosomal protein S92e-1890.9
NC_007645:6013242:602347860234786023870393Hahella chejuensis KCTC 2396, complete genomeRibosomal protein S93e-1890.5
NC_004545:392685:410946410946411338393Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeribosomal protein S95e-1889.7
NC_012225:2474042:247705924770592477457399Brachyspira hyodysenteriae WA1, complete genome30S ribosomal protein S95e-1889.7
NC_018604:2377549:238592023859202386318399Brachyspira pilosicoli WesB complete genome30S ribosomal protein S96e-1889.4
NC_019908:2285819:229904022990402299438399Brachyspira pilosicoli P43/6/78 chromosome, complete genome30S ribosomal protein S96e-1889.4
NC_012803:1839809:183980918398091840297489Micrococcus luteus NCTC 2665, complete genomeSSU ribosomal protein S9P7e-1889
NC_005823:905500:926298926298926717420Leptospira interrogans serovar Copenhageni str. Fiocruz L1-13030S ribosomal protein S91e-1788.6
NC_004342:3370310:337031033703103370729420Leptospira interrogans serovar Lai str. 56601 chromosome I,ribosomal protein S91e-1788.6
NC_015672:2071141:208761420876142088003390Flexistipes sinusarabici DSM 4947 chromosome, complete genome30S ribosomal protein S91e-1788.6
NC_012440:373863:387751387751388179429Persephonella marina EX-H1, complete genomeribosomal protein S92e-1787.8
NC_008011:663958:689297689297689689393Lawsonia intracellularis PHE/MN1-00, complete genomeribosomal protein S92e-1787.8
NC_013440:5509790:552911655291165529511396Haliangium ochraceum DSM 14365, complete genomeribosomal protein S93e-1787
NC_007940:266000:266485266485266979495Rickettsia bellii RML369-C, complete genome30S ribosomal protein S99e-1785.5
NC_009883:1262000:126219012621901262684495Rickettsia bellii OSU 85-389, complete genome30S ribosomal protein S99e-1785.5
NC_015580:3834244:385693438569343857449516Novosphingobium sp. PP1Y, complete genome30S ribosomal protein S91e-1685.1
NC_018644:1263891:128525212852521285641390Alpha proteobacterium HIMB59 chromosome, complete genomeRibosomal protein S9/S162e-1684.7
NC_014006:611592:616378616378616905528Sphingobium japonicum UT26S chromosome 1, complete genomeribosomal protein S92e-1684.3
NC_007086:557789:579396579396579788393Xanthomonas campestris pv. campestris str. 8004, complete genome30S ribosomal protein S93e-1683.6
NC_003902:555699:577313577313577705393Xanthomonas campestris pv. campestris str. ATCC 33913, complete30S ribosomal protein S93e-1683.6
NC_008687:133728:140856140856141335480Paracoccus denitrificans PD1222 chromosome 2, complete sequenceribosomal protein S93e-1683.6
NC_016001:224213:233132233132233518387Flavobacterium branchiophilum, complete genome30S ribosomal protein S93e-1683.6
NC_015311:813989:833430833430833816387Prevotella denticola F0289 chromosome, complete genome30S ribosomal protein S94e-1683.2
NC_003911:1791878:179813317981331798615483Silicibacter pomeroyi DSS-3, complete genome30S ribosomal protein S95e-1683.2
NC_016026:997225:102750510275051027993489Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeribosomal S9/S16 family protein8e-1682.4
NC_011565:385454:394274394274394660387Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,30S ribosomal protein S99e-1682
NC_013894:464907:469797469797470237441Thermocrinis albus DSM 14484 chromosome, complete genomeribosomal protein S92e-1581.3
NC_015722:852000:853004853004853444441Candidatus Midichloria mitochondrii IricVA chromosome, complete30S ribosomal protein S92e-1580.9
NC_013454:229587:232161232161232571411Blattabacterium sp. (Blattella germanica) str. Bge, complete30S ribosomal protein S96e-1579.3
NC_011901:2914000:292865629286562929048393Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete30S ribosomal protein S92e-1477.8
NC_014499:87528:106186106186106575390Candidatus Sulcia muelleri CARI chromosome, complete genome30S ribosomal protein S92e-1477.4
NC_015557:905145:926913926913927353441Hydrogenobaculum sp. 3684 chromosome, complete genomeribosomal protein S91e-1271.6
NC_015587:905255:927023927023927463441Hydrogenobaculum sp. SHO chromosome, complete genomeribosomal protein S91e-1271.6
NC_011126:922182:941858941858942298441Hydrogenobaculum sp. Y04AAS1, complete genomeribosomal protein S91e-1271.6
NC_020411:905335:927103927103927543441Hydrogenobaculum sp. HO, complete genomeribosomal protein S91e-1271.6
NC_016146:360455:384623384623384997375Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR30S ribosomal protein S92e-1271.2
NC_016621:224700:225147225147225521375Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu chromosome,30S ribosomal protein S92e-1167.8
NC_014205:1553530:156233715623371562750414Staphylothermus hellenicus DSM 12710 chromosome, complete genomeribosomal protein S9P2e-1064.3
NC_013123:78786:100608100608100997390Candidatus Sulcia muelleri SMDSEM, complete genomeribosomal protein S95e-1063.2
NC_009033:791515:814428814428814841414Staphylothermus marinus F1, complete genomeribosomal protein S97e-1062.8
NC_015155:347231:349860349860350297438Mycoplasma suis str. Illinois chromosome, complete genome30S ribosomal protein S93e-0960.5
NC_014160:1273859:129888312988831299308426Thermosphaera aggregans DSM 11486 chromosome, complete genome30S ribosomal protein S9P6e-0959.7
NC_011766:1255503:126421012642101264632423Desulfurococcus kamchatkensis 1221n chromosome, complete genome30S ribosomal protein S9P9e-0958.9
NC_014004:66631:838028380284200399Candidatus Sulcia muelleri DMIN chromosome, complete genomeSSU ribosomal protein S9P5e-0649.7
NC_014471:163404:163906163906164370465Ignisphaera aggregans DSM 17230 chromosome, complete genomeSSU ribosomal protein S9P8e-0649.3