Pre_GI: BLASTP Hits

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Query: NC_004432:32500:47785 Mycoplasma penetrans HF-2, complete genome

Start: 47785, End: 48378, Length: 594

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018497:252374:253788253788254411624Mycoplasma genitalium M6320 chromosome, complete genomesegregation and condensation protein B2e-27122
NC_000908:253979:253979253979254602624Mycoplasma genitalium G37, complete genomesegregation and condensation protein B2e-27122
NC_020134:586840:588686588686589237552Clostridium stercorarium subsp. stercorarium DSM 8532, completesegregation and condensation protein B1e-22106
NC_016148:1175999:118696911869691187553585Thermovirga lienii DSM 17291 chromosome, complete genomechromosome segregation and condensation protein ScpB1e-21102
NC_015558:1485762:150792015079201508471552Streptococcus parauberis KCTC 11537 chromosome, complete genomesegregation and condensation protein B8e-2096.7
NC_007677:1847913:186091118609111861657747Salinibacter ruber DSM 13855, complete genomesegregation and condensation protein B6e-1994
NC_014654:1529500:154441615444161545072657Halanaerobium sp. 'sapolanicus' chromosome, complete genomechromosome segregation and condensation protein, ScpB8e-1993.6
NC_014032:1911500:192430519243051925051747Salinibacter ruber M8 chromosome, complete genomesegregation and condensation protein B1e-1892.8
NC_015687:2145452:216564921656492166257609Clostridium acetobutylicum DSM 1731 chromosome, complete genomesegregation and condensation protein B1e-1892.8
NC_010321:1177238:118023511802351180741507Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromosome segregation and condensation protein ScpB2e-1892.4
NC_010320:1585974:158669515866951587201507Thermoanaerobacter sp. X514 chromosome, complete genomeputative transcriptional regulator2e-1892.4
NC_014964:1169925:117242611724261172932507Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completesegregation and condensation protein B2e-1892.4
NC_014538:1311500:132718113271811327687507Thermoanaerobacter sp. X513 chromosome, complete genomechromosome segregation and condensation protein, ScpB2e-1892.4
NC_010674:2435241:245660024566002457193594Clostridium botulinum B str. Eklund 17B, complete genomesegregation and condensation protein B5e-1787.4
NC_012806:105133:122626122626123195570Mycoplasma conjunctivae, complete genomeSegregation and condensation protein B1e-1685.9
NC_014484:1163576:119227111922711192807537Spirochaeta thermophila DSM 6192 chromosome, complete genomeputative transcriptional regulator3e-1581.6
NC_014391:2579919:2581977258197725829781002Micromonospora aurantiaca ATCC 27029 chromosome, complete genomesegregation and condensation protein B3e-1581.6
NC_018607:2578433:258720125872012587836636Brachyspira pilosicoli B2904 chromosome, complete genomesegregation and condesation protein B3e-1478.2
NC_014330:1541874:155011415501141550749636Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative segregation and condesation protein B3e-1478.2
NC_018604:233769:241654241654242289636Brachyspira pilosicoli WesB complete genomeputative segregation and condesation protein B3e-1478.2
NC_014836:2325559:233844123384412339055615Desulfurispirillum indicum S5 chromosome, complete genomesegregation and condensation protein B4e-1477.8
NC_013521:2193203:221276922127692213443675Sanguibacter keddieii DSM 10542, complete genomecondensin subunit ScpB7e-1477
NC_007633:696604:714745714745715374630Mycoplasma capricolum subsp. capricolum ATCC 27343, completechromosomal segregation and condensation protein B2e-1375.5
NC_014253:2113233:2118468211846821195891122Methanohalobium evestigatum Z-7303 chromosome, complete genomechromosome segregation and condensation protein ScpB3e-1374.7
NC_016940:470163:495932495932496501570Saprospira grandis str. Lewin chromosome, complete genomecondensin subunit scpb6e-1373.9
NC_013729:5497814:5514765551476555167862022Kribbella flavida DSM 17836, complete genomechromosome segregation and condensation protein, ScpB6e-1373.9
NC_008570:3220539:327996032799603280556597Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesegregation and condensation protein B2e-1272
NC_015424:3112637:317430431743043174876573Aeromonas veronii B565 chromosome, complete genomeSegregation and condensation protein B1e-1169.7
NC_013515:1483471:149930614993061499839534Streptobacillus moniliformis DSM 12112, complete genomechromosome segregation and condensation protein, ScpB2e-1168.9
NC_007517:2165657:218353221835322184119588Geobacter metallireducens GS-15, complete genomeputative transcriptional regulator3e-1168.6
NC_013947:4695000:471914947191494719934786Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechromosome segregation and condensation protein, ScpB1e-1066.2
NC_016783:1169821:119138611913861191940555Corynebacterium diphtheriae INCA 402 chromosome, complete genomesegregation and condensation protein B1e-1066.2
NC_013169:1545890:156043415604341561195762Kytococcus sedentarius DSM 20547, complete genomecondensin subunit ScpB1e-1066.2
NC_016932:1041306:104345310434531044076624Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSegregation and condensation protein B2e-1065.9
NC_016781:1039716:105182210518221052445624Corynebacterium pseudotuberculosis 3/99-5 chromosome, completesegregation and condensation protein B2e-1065.5
NC_017317:1143378:114337811433781144010633Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein2e-1065.5
NC_014002:1772060:1786572178657217876871116Methanohalophilus mahii DSM 5219 chromosome, complete genomecondensin subunit ScpB2e-1065.5
NC_014329:1041556:105183110518311052454624Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-1065.5
NC_017031:1039548:105165410516541052277624Corynebacterium pseudotuberculosis P54B96 chromosome, completeSegregation and condensation protein B2e-1065.5
NC_017300:1045555:104930410493041049927624Corynebacterium pseudotuberculosis 1002 chromosome, completeSegregation and condensation protein B2e-1065.5
NC_017301:1037519:105146710514671052090624Corynebacterium pseudotuberculosis C231 chromosome, completeSegregation and condensation protein B2e-1065.5
NC_017303:1039562:105166810516681052291624Corynebacterium pseudotuberculosis I19 chromosome, complete genomeSegregation and condensation protein B2e-1065.5
NC_017305:1037133:104923910492391049862624Corynebacterium pseudotuberculosis PAT10 chromosome, completeSegregation and condensation protein B2e-1065.5
NC_020133:2421965:242196524219652422672708Mycobacterium liflandii 128FXT, complete genometranscriptional regulator2e-1065.5
NC_014315:2177277:217897721789772179645669Nitrosococcus watsoni C-113 chromosome, complete genomechromosome segregation and condensation protein ScpB5e-1064.3
NC_008781:1973826:198988219898821990547666Polaromonas naphthalenivorans CJ2, complete genomeputative transcriptional regulator6e-1063.9
NC_015676:2099930:2105251210525121063451095Methanosalsum zhilinae DSM 4017 chromosome, complete genomechromosome segregation and condensation protein ScpB1e-0962.8
NC_014958:1268559:127515612751561275674519Deinococcus maricopensis DSM 21211 chromosome, complete genomechromosome segregation and condensation protein ScpB2e-0962
NC_018876:1489895:1494678149467814957811104Methanolobus psychrophilus R15 chromosome, complete genomecondensin subunit ScpB3e-0961.6
NC_007955:1566189:1573100157310015742031104Methanococcoides burtonii DSM 6242, complete genomechromosome segregation and condensation protein ScpB6e-0960.5
NC_000868:269923:292486292486293064579Pyrococcus abyssi GE5, complete genomehypothetical protein6e-0960.5
NC_013192:2381901:240112724011272401750624Leptotrichia buccalis DSM 1135, complete genomechromosome segregation and condensation protein, ScpB9e-0960.1
NC_013741:27353:318093180932303495Archaeoglobus profundus DSM 5631, complete genomechromosome segregation and condensation protein, ScpB6e-0857.4
NC_012883:636560:652229652229652807579Thermococcus sibiricus MM 739, complete genomePredicted transcription regulator, YpuH-like family1e-0756.2
NC_019942:1270060:128546212854621285956495Aciduliprofundum sp. MAR08-339, complete genomesegregation and condensation protein B6e-0650.8