Pre_GI: BLASTP Hits

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Query: NC_004432:1225077:1225077 Mycoplasma penetrans HF-2, complete genome

Start: 1225077, End: 1225574, Length: 498

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009802:197482:238445238445238936492Campylobacter concisus 13826, complete genomeflavodoxin6e-27119
NC_007604:1586243:159865615986561599168513Synechococcus elongatus PCC 7942, complete genomeFlavodoxin, long chain8e-1683.2
NC_013515:65822:836278362784124498Streptobacillus moniliformis DSM 12112, complete genomeflavodoxin1e-1479
NC_013192:107672:127057127057127551495Leptotrichia buccalis DSM 1135, complete genomeflavodoxin5e-1373.6
NC_017192:20404:379573795738478522Arcobacter sp. L, complete genomeflavodoxin9e-1372.8
NC_012779:3176820:322840832284083228920513Edwardsiella ictaluri 93-146, complete genomeflavodoxin, putative1e-1272.4
NC_016901:2542110:256502925650292565556528Shewanella baltica OS678 chromosome, complete genomeflavodoxin5e-1270.5
NC_015709:1459838:149630714963071496789483Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeflavodoxin9e-1269.3
NC_021150:3303959:330791233079123308394483Azotobacter vinelandii CA6, complete genomeflavodoxin FldA9e-1269.3
NC_012560:3303961:330791433079143308396483Azotobacter vinelandii DJ, complete genomeflavodoxin protein9e-1269.3
NC_010546:3071377:307936630793663079878513Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceflavodoxin2e-1168.2
NC_008820:1197898:120447612044761205000525Prochlorococcus marinus str. MIT 9303, complete genomeFlavodoxin5e-1167
NC_005071:866468:877149877149877673525Prochlorococcus marinus str. MIT 9313, complete genomeflavodoxin5e-1167
NC_012962:1364638:138476013847601385281522Photorhabdus asymbiotica, complete genomeflavodoxin-21e-1065.5
NC_012032:398419:408326408326408898573Chloroflexus sp. Y-400-fl, complete genomeflavodoxin2e-1065.1
NC_010175:398453:408360408360408932573Chloroflexus aurantiacus J-10-fl, complete genomeflavodoxin2e-1065.1
NC_014840:286767:307019307019307549531Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceflavodoxin2e-1065.1
NC_016612:477407:508552508552509073522Klebsiella oxytoca KCTC 1686 chromosome, complete genomeflavodoxin FldB2e-1065.1
NC_016614:686887:691143691143691679537Vibrio sp. EJY3 chromosome 2, complete sequenceflavodoxin3e-1064.3
NC_008319:1727686:173618917361891736698510Synechococcus sp. CC9311, complete genomeflavodoxin4e-1063.9
NC_007516:1439537:145324414532441453753510Synechococcus sp. CC9605, complete genomeflavodoxin2e-0962
NC_007516:2383097:239522123952212395676456Synechococcus sp. CC9605, complete genomeflavodoxin3e-0961.2
NC_014121:4299500:433230943323094332830522Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeflavodoxin FldB5e-0960.5
NC_020064:3825916:384468038446803845246567Serratia marcescens FGI94, complete genomeflavodoxin, long chain6e-0960.1
NC_013956:3525711:354492635449263545444519Pantoea ananatis LMG 20103 chromosome, complete genomeFldB7e-0960.1
NC_007513:1900000:191263319126331913142510Synechococcus sp. CC9902, complete genomeflavodoxin8e-0959.7
NC_008599:903530:906500906500906985486Campylobacter fetus subsp. fetus 82-40, complete genomeflavodoxin3e-0754.7
NC_018012:121793:124909124909125280372Thiocystis violascens DSM 198 chromosome, complete genome2e-0651.6