Pre_GI: BLASTP Hits

Some Help

Query: NC_004431:3409389:3442798 Escherichia coli CFT073, complete genome

Start: 3442798, End: 3443358, Length: 561

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:3453683:346686434668643467424561Escherichia coli UMN026 chromosome, complete genomeputative transcriptional regulator1e-107388
CP002797:4812799:481703848170384817319282Escherichia coli NA114, complete genomeHypothetical protein1e-48192
NC_008545:115292:127562127562128125564Burkholderia cenocepacia HI2424 plasmid 1, complete sequencetranscriptional regulator, TetR family4e-1787.8
NC_008543:90312:107603107603108166564Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-1787.8
NC_008061:2153495:216160721616072162170564Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-1787.8
NC_010515:1375091:140668514066851407248564Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family2e-1582
NC_012791:2233098:224178422417842242434651Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, TetR family5e-1580.9
NC_009659:1129066:114502411450241145587564Janthinobacterium sp. Marseille chromosome, complete genomeTetR family transcriptional regulator4e-1477.8
NC_008390:2156188:217708321770832177646564Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, TetR family8e-1476.6
NC_004578:4781326:480645848064584807027570Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, TetR family4e-1271.2
NC_009659:1024201:104447610444761045036561Janthinobacterium sp. Marseille chromosome, complete genomeTetR family transcriptional regulator4e-1270.9
NC_010552:335989:345128345128345691564Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, TetR family5e-1270.9
NC_008740:443274:483508483508484074567Marinobacter aquaeolei VT8, complete genometranscriptional regulator, TetR family5e-1270.9
NC_004578:4781326:480170948017094802299591Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, TetR family6e-1270.5
NC_002678:3701500:370335737033573703944588Mesorhizobium loti MAFF303099, complete genometranscriptional regulator (tetR-family)7e-1270.1
NC_008750:2332000:234367323436732344257585Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family1e-1066.6
NC_008527:125723:131535131535132074540Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator1e-1065.9
NC_020064:3998715:403922240392224039806585Serratia marcescens FGI94, complete genometranscriptional regulator2e-1065.5
NC_011071:1877500:190017419001741900761588Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, TetR family7e-1063.5
NC_016514:1183356:118976111897611190348588Enterobacter cloacae EcWSU1 chromosome, complete genomeTetR family transcriptional Regulator7e-1063.5
NC_016147:1672482:167954316795431680130588Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator2e-0962
NC_011001:568970:568970568970569545576Burkholderia cenocepacia J2315 chromosome 2, complete sequenceTetR family regulatory protein7e-0960.1
NC_014217:716500:720611720611721195585Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, TetR family1e-0859.7
NC_009925:2240871:225482422548242255411588Acaryochloris marina MBIC11017, complete genometranscriptional regulator, TetR family1e-0859.3
NC_010557:207846:223133223133223699567Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-0858.5
NC_012880:1711062:172366217236621724213552Dickeya dadantii Ech703, complete genometranscriptional regulator, TetR family1e-0756.2
NC_010625:1370462:139744613974461398036591Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, TetR family1e-0756.2
NC_014258:42262:438174381744380564Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator2e-0755.5
NC_011887:72364:813868138681883498Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, TetR family5e-0753.9
NC_012108:904260:918404918404919174771Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (TetR family protein)1e-0652.4
NC_018515:3108755:313167231316723132274603Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator5e-0650.8