Pre_GI: BLASTP Hits

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Query: NC_004431:3040953:3059233 Escherichia coli CFT073, complete genome

Start: 3059233, End: 3059859, Length: 627

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c27e-49193
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI7e-49193
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator7e-49193
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c27e-49193
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein2e-48191
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c26e-48190
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)2e-45182
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage1e-44179
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage5e-44177
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C21e-41169
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator1e-38159
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family1e-37156
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor1e-36152
NC_015663:4767443:478544147854414786193753Enterobacter aerogenes KCTC 2190 chromosome, complete genomeP22 repressor protein c26e-36150
NC_009778:2993218:301640330164033017065663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-32138
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)9e-31133
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI5e-30130
NC_009783:1956000:195674419567441957409666Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-29128
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor9e-29126
NC_014306:3524980:356790335679033568601699Erwinia billingiae Eb661, complete genomeRepressor protein cI3e-28125
NC_012660:3116500:312771631277163128423708Pseudomonas fluorescens SBW25 chromosome, complete genomee14 prophage; putative phage repressor8e-28123
NC_011283:4212000:422109942210994221815717Klebsiella pneumoniae 342 chromosome, complete genomephage repressor protein1e-27122
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor3e-26118
NC_017328:303987:317642317642318337696Shigella flexneri 2002017 chromosome, complete genomeCI protein3e-25115
NC_011601:2614691:261961826196182620331714Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein2e-25115
NC_013364:2645438:265235726523572652980624Escherichia coli O111:H- str. 11128, complete genomeputative phage repressor protein CI3e-25114
NC_020418:3133831:313802131380213138731711Morganella morganii subsp. morganii KT, complete genomerepressor protein CI1e-24113
NC_012759:4132527:414282841428284143541714Escherichia coli BW2952 chromosome, complete genomeRepressor protein CI1e-24113
NC_002695:301939:301939301939302652714Escherichia coli O157:H7 str. Sakai, complete genomecI9e-25113
NC_002655:301940:301940301940302653714Escherichia coli O157:H7 EDL933, complete genomeputative cI repressor protein for prophage CP-933H9e-25113
NC_011353:305820:305820305820306533714Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage repressor9e-25113
NC_008563:1175035:118767011876701188365696Escherichia coli APEC O1, complete genomeputative CI repressor of bacteriophage5e-24110
NC_011742:1177946:119125811912581191959702Escherichia coli S88 chromosome, complete genomeRepressor protein CI from phage origin5e-24110
NC_013941:975353:989229989229989882654Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI protein6e-24110
NC_011601:1039500:105177110517711052424654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein6e-24110
NC_007946:1239278:125028212502821250935654Escherichia coli UTI89, complete genomeputative CI repressor of bacteriophage6e-24110
NC_004578:3849835:385799038579903858721732Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein c27e-23107
NC_004431:1401681:141242714124271412849423Escherichia coli CFT073, complete genomeRepressor protein1e-21102
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein2e-21102
NC_002947:3404000:341945034194503420181732Pseudomonas putida KT2440, complete genomepyocin R2_PP, transcriptional repressor, CI/C2 family2e-21102
NC_017986:5509569:552387155238715524602732Pseudomonas putida ND6 chromosome, complete genometranscriptional repressor pyocin R2 PP2e-21102
NC_007712:2028500:206857220685722069294723Sodalis glossinidius str. 'morsitans', complete genomephage repressor5e-21100
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein2e-2099.4
NC_012779:2184927:220196422019642202635672Edwardsiella ictaluri 93-146, complete genomerepressor protein CI2e-2098.6
NC_014837:2354241:235780423578042358529726Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator3e-1892
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1789.7
NC_021066:2226826:224423422442342244866633Raoultella ornithinolytica B6, complete genomehypothetical protein1e-1686.7
AC_000091:1191353:120383612038361204510675Escherichia coli W3110 DNA, complete genomerepressor protein phage e142e-1685.9
NC_007946:2931364:293500329350032935677675Escherichia coli UTI89, complete genomeputative phage repressor2e-1685.9
NC_008563:2946391:295003029500302950704675Escherichia coli APEC O1, complete genomeputative phage repressor2e-1685.9
NC_000913:1188999:120148212014821202156675Escherichia coli K12, complete genomee14 prophage; repressor protein phage e142e-1685.9
NC_011742:2863316:286734128673412868015675Escherichia coli S88 chromosome, complete genomerepressor protein phage e14; e14 prophage2e-1685.9
NC_011750:5045927:505908250590825059756675Escherichia coli IAI39 chromosome, complete genomerepressor protein phage e14; e14 prophage4e-1684.3
NC_004578:4499143:452278245227824523486705Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein cI7e-1684
NC_010002:2110953:212346721234672124114648Delftia acidovorans SPH-1, complete genomepeptidase S24 and S26 domain protein3e-1581.6
NC_004129:2201780:221380922138092214522714Pseudomonas fluorescens Pf-5, complete genomepeptidase S24-like domain4e-1478.2
NC_015424:2726223:275560227556022756036435Aeromonas veronii B565 chromosome, complete genomephage repressor4e-1477.8
NC_016809:1778000:177820117782011778866666Haemophilus influenzae 10810, complete genomehypothetical protein1e-1376.6
NC_006138:2288261:230836023083602309070711Desulfotalea psychrophila LSv54, complete genomesimilar to repressor protein1e-1376.3
NC_013446:3034486:304282630428263043365540Comamonas testosteroni CNB-2, complete genomeputative prophage repressor2e-1375.5
NC_017986:4091051:410215841021584102514357Pseudomonas putida ND6 chromosome, complete genomerepressor protein CI4e-1374.7
NC_014640:4293430:433149743314974332201705Achromobacter xylosoxidans A8 chromosome, complete genomerepressor protein C2 domain-containing protein4e-1374.7
NC_009524:1627414:163576016357601636419660Psychrobacter sp. PRwf-1 chromosome, complete genomeputative prophage repressor6e-1374.3
NC_014910:1708045:172518017251801725950771Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein2e-1272.4
NC_014562:1844268:185137318513731852005633Pantoea vagans C9-1 chromosome, complete genomeLexA repressor2e-1272.4
NC_013171:896802:898431898431899051621Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, XRE family1e-1169.7
NC_012791:2832001:285731328573132857981669Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-1169.3
NC_009800:320115:326165326165326806642Escherichia coli HS, complete genomehelix-turn-helix/peptidase S24-like domain protein1e-1066.6
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein5e-1064.3
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator5e-1064.3
NC_016830:5031819:504224950422495042896648Pseudomonas fluorescens F113 chromosome, complete genomepeptidase s24-like domain protein5e-1064.3
NC_009999:38832:459184591846562645Shewanella baltica OS195 plasmid pS19502, complete sequenceputative phage repressor5e-1064.3
NC_013861:3341955:335452733545273355216690Legionella longbeachae NSW150, complete genomephage repressor6e-1063.9
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein7e-1063.9
NC_010516:2328288:234697823469782347427450Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator3e-0961.6
NC_015873:1193843:121736912173691217983615Megasphaera elsdenii DSM 20460, complete genomelexA repressor family protein5e-0960.8
NC_011898:2509267:251475425147542515374621Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family1e-0859.7
NC_016791:2888319:289017028901702890790621Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains1e-0859.7
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family2e-0858.9
NC_012491:3736167:377384737738473774209363Brevibacillus brevis NBRC 100599, complete genomeputative DNA-binding protein7e-0857.4
NC_013198:1095591:110846011084601108798339Lactobacillus rhamnosus GG, complete genomeprophage protein, DNA-binding protein1e-0756.6
NC_006582:2944237:299182829918282992457630Bacillus clausii KSM-K16, complete genomeSOS-response transcriptional repressor1e-0756.6
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0755.5
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0754.7
NC_011601:1269500:127378112737811274188408Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranscriptional repressor DicA4e-0754.7
NC_020260:1615135:162344316234431623850408Cronobacter sakazakii Sp291, complete genometranscriptional repressor DicA5e-0754.3
NC_014727:95875:103009103009103629621Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,peptidase s24-like protein5e-0754.3
NC_010999:1245239:125530312553031255641339Lactobacillus casei, complete genomeRepressor (Gp132 protein)6e-0754.3
NC_003485:1228149:123886512388651239620756Streptococcus pyogenes MGAS8232, complete genomeputative repressor1e-0653.1
NC_002737:1207880:121999812199981220753756Streptococcus pyogenes M1 GAS, complete genomeputative repressor - phage associated1e-0653.1
NC_011751:1859606:188001818800181880476459Escherichia coli UMN026 chromosome, complete genometranscriptional repressor DicA1e-0652.8
NC_013361:2138716:215983821598382160245408Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional repressor DicA1e-0652.8
NC_011748:1408280:141408614140861414544459Escherichia coli 55989, complete genometranscriptional repressor DicA2e-0652.8
CU928145:1408280:141408614140861414544459Escherichia coli 55989 chromosome, complete genomeputative repressor protein of division inhibition from phage origin2e-0652.8
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0652.4
NC_008341:29038:461294612946572444Nitrosomonas eutropha C91 plasmid1, complete sequenceputative prophage repressor4e-0651.6
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family4e-0651.6
NC_006576:2683467:709970997659561Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V4e-0651.2
NC_007604:1586243:160612916061291606689561Synechococcus elongatus PCC 7942, complete genomeDNA polymerase V4e-0651.2
NC_016002:2179969:218853921885392188967429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein7e-0650.8
NC_016002:1741109:175018817501881750616429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein7e-0650.8
NC_014532:3596097:362965336296533630096444Halomonas elongata DSM 2581, complete genomehypothetical protein9e-0650.4