Pre_GI: BLASTP Hits

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Query: NC_004431:3040953:3055857 Escherichia coli CFT073, complete genome

Start: 3055857, End: 3056246, Length: 390

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:2863316:286331628633162863705390Escherichia coli S88 chromosome, complete genomeCrossover junction endodeoxyribonuclease6e-70261
NC_008563:2946391:294600529460052946394390Escherichia coli APEC O1, complete genomebacteriophage V crossover junction endodeoxyribonuclease6e-70261
NC_011740:4520373:452247645224764522865390Escherichia fergusonii ATCC 35469, complete genomeCrossover junction endodeoxyribonuclease6e-70261
NC_007946:2931364:293097829309782931367390Escherichia coli UTI89, complete genomebacteriophage V crossover junction endodeoxyribonuclease6e-70261
NC_011750:5045927:506529650652965065685390Escherichia coli IAI39 chromosome, complete genomeCrossover junction endodeoxyribonuclease2e-69260
NC_011742:4962008:496500949650094965398390Escherichia coli S88 chromosome, complete genomeCrossover junction endodeoxyribonuclease from phage origin2e-69260
NC_008563:5011997:501499850149985015387390Escherichia coli APEC O1, complete genomebacteriophage V crossover junction endodeoxyribonuclease2e-69260
NC_013941:5317424:531982953198295320224396Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHolliday junction resolvase2e-67253
NC_013282:1804909:182027018202701820659390Cronobacter turicensis, complete genomeCrossover junction endodeoxyribonuclease rusA1e-46184
NC_009778:959982:981951981951982334384Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-46182
NC_012731:2083650:210511521051152105513399Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomebacteriophage V crossover junction endodeoxyribonuclease2e-44177
NC_014838:218000:235514235514235879366Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceendodeoxyribonuclease RusA5e-40162
NC_017047:1906000:191091619109161911290375Rahnella aquatilis HX2 chromosome, complete genomeendodeoxyribonuclease RusA6e-34142
NC_015663:4522109:453090345309034531268366Enterobacter aerogenes KCTC 2190 chromosome, complete genomeendodeoxyribonuclease RUS4e-1890.1
NC_015663:4767443:477570747757074776072366Enterobacter aerogenes KCTC 2190 chromosome, complete genomeendodeoxyribonuclease RUS1e-1788.2
NC_020063:2565605:257464325746432575005363Enterobacteriaceae bacterium strain FGI 57, complete genomeholliday junction resolvase2e-1787.8
NC_007712:1219957:124588312458831246242360Sodalis glossinidius str. 'morsitans', complete genomeputative phage endonuclease3e-1787
NC_013361:1754346:175398417539841754349366Escherichia coli O26:H11 str. 11368 chromosome, complete genomeholliday junction resolvase7e-1785.9
NC_016514:2387312:239450623945062394868363Enterobacter cloacae EcWSU1 chromosome, complete genomeCrossover junction endodeoxyribonuclease rusA8e-1785.5
NC_008258:2045000:206238520623852062750366Shigella flexneri 5 str. 8401, complete genomeputative endonuclease encoded by cryptic prophage1e-1685.1
NC_011601:1269500:128456112845611284926366Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomecrossover junction endodeoxyribonuclease2e-1684.7
CU928145:1408280:142231514223151422674360Escherichia coli 55989 chromosome, complete genomeputative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) (Gp67)3e-1684
NC_011748:1408280:142231514223151422674360Escherichia coli 55989, complete genomeputative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) (Gp67)3e-1684
NC_009801:1419324:143291514329151433274360Escherichia coli E24377A, complete genomecrossover junction endodeoxyribonuclease RusA homolog3e-1684
NC_008258:1934479:193859419385941938953360Shigella flexneri 5 str. 8401, complete genomeputative endonuclease encoded by cryptic prophage3e-1684
NC_013364:1596278:161370916137091614083375Escherichia coli O111:H- str. 11128, complete genomeputative holliday junction resolvase5e-1683.2
CU928145:1773642:178743817874381787815378Escherichia coli 55989 chromosome, complete genomeputative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) (Gp67)6e-1682.8
NC_011748:1773642:178743817874381787815378Escherichia coli 55989, complete genomeputative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) (Gp67)6e-1682.8
NC_011601:1039500:105785110578511058213363Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomecrossover junction endodeoxyribonuclease9e-1682
NC_016822:3065426:306824230682423068613372Shigella sonnei 53G, complete genomeendonuclease1e-1582
NC_007384:2933625:293693829369382937309372Shigella sonnei Ss046, complete genomeputative endonuclease1e-1582
NC_009800:289000:307182307182307544363Escherichia coli HS, complete genomecrossover junction endodeoxyribonuclease RusA1e-1581.6
NC_012947:3231893:324005632400563240418363Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendodeoxyribonuclease RUS2e-1581.3
NC_012967:531000:545261545261545623363Escherichia coli B str. REL606 chromosome, complete genomeendodeoxyribonuclease RUS2e-1581.3
NC_007384:1320287:133818613381861338560375Shigella sonnei Ss046, complete genomeputative crossover junction endodeoxyribonuclease2e-1581.3
NC_016822:1304398:132180413218041322178375Shigella sonnei 53G, complete genomecrossover junction endodeoxyribonuclease2e-1581.3
NC_009655:1357486:137382713738271374192366Actinobacillus succinogenes 130Z chromosome, complete genomeendodeoxyribonuclease RusA3e-1580.5
NC_020260:1615135:163064816306481631010363Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-1580.1
NC_008258:269806:294823294823295185363Shigella flexneri 5 str. 8401, complete genomeputative crossover junction endodeoxyribonuclease4e-1580.1
NC_011147:2496808:250604025060402506402363Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-1579.7
NC_006511:2501500:251050425105042510866363Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-1579.7
NC_011740:2769961:278010927801092780471363Escherichia fergusonii ATCC 35469, complete genomeendonuclease RUS; DLP12 prophage7e-1579.3
AC_000091:558920:572594572594572956363Escherichia coli W3110 DNA, complete genomeendonuclease RUS1e-1478.6
NC_000913:558920:572594572594572956363Escherichia coli K12, complete genomeDLP12 prophage; endonuclease RUS1e-1478.6
NC_007946:1239278:125538512553851255747363Escherichia coli UTI89, complete genomeCrossover junction endodeoxyribonuclease RusA1e-1478.6
NC_008563:1175035:119277211927721193134363Escherichia coli APEC O1, complete genomeendonuclease RUS1e-1478.6
NC_004431:1401681:141885014188501419212363Escherichia coli CFT073, complete genomeCrossover junction endodeoxyribonuclease rusA1e-1478.6
NC_010473:498252:511926511926512288363Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; endonuclease RUS1e-1478.6
NC_011353:2957962:296545229654522965814363Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeendodeoxyribonuclease RUS1e-1478.6
NC_011742:1177946:119629411962941196656363Escherichia coli S88 chromosome, complete genomeendodeoxyribonuclease RUS1e-1478.6
NC_012759:461680:475354475354475716363Escherichia coli BW2952 chromosome, complete genomeendodeoxyribonuclease RUS1e-1478.6
NC_013008:2910567:292032329203232920685363Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendodeoxyribonuclease RUS1e-1478.6
NC_013941:699286:712717712717713079363Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCrossover junction endodeoxyribonuclease rusA1e-1478.6
NC_011751:1405381:142429214242921424654363Escherichia coli UMN026 chromosome, complete genomeendodeoxyribonuclease RUS1e-1478.6
NC_011751:643976:660259660259660621363Escherichia coli UMN026 chromosome, complete genomeendodeoxyribonuclease RUS1e-1478.6
NC_017328:303987:323731323731324093363Shigella flexneri 2002017 chromosome, complete genomeHoliday-junction resolvase2e-1477.8
NC_012125:1330066:135090713509071351302396Salmonella enterica subsp. enterica serovar Paratyphi C strainendodeoxyribonuclease RUS3e-1477
NC_006905:368942:389632389632390027396Salmonella enterica subsp. enterica serovar Choleraesuis strRus3e-1477
NC_013282:1200993:122183812218381222233396Cronobacter turicensis, complete genomeCrossover junction endodeoxyribonuclease rusA4e-1476.6
NC_009778:1556222:157174015717401572102363Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-1476.3
NC_013850:1887556:190854819085481908943396Klebsiella variicola At-22 chromosome, complete genomeCrossover junction endodeoxyribonuclease7e-1475.9
NC_009053:553298:572506572506572874369Actinobacillus pleuropneumoniae L20, complete genomepredicted Endodeoxyribonuclease RusA1e-1375.1
NC_012751:899394:903962903962904237276Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeendonuclease RUS2e-1167.8
CU928145:824367:835595835595835822228Escherichia coli 55989 chromosome, complete genomefragment of endonuclease RUS; DLP12 prophage (partial)1e-0858.9
NC_011748:824367:835595835595835822228Escherichia coli 55989, complete genome1e-0858.9
NC_020181:5217000:524168652416865241829144Enterobacter aerogenes EA1509E, complete genomehypothetical protein1e-0858.5
NC_011369:1135592:114745811474581147817360Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeendodeoxyribonuclease RusA1e-0755.5
NC_015850:1279372:129412212941221294538417Acidithiobacillus caldus SM-1 chromosome, complete genomeendodeoxyribonuclease RusA5e-0753.1