Pre_GI: BLASTP Hits

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Query: NC_004431:279868:288649 Escherichia coli CFT073, complete genome

Start: 288649, End: 288786, Length: 138

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:1306756:131724813172481317445198Escherichia coli O111:H- str. 11128, complete genomeputative DNA binding protein7e-2095.9
NC_013361:1335166:134566313456631345860198Escherichia coli O26:H11 str. 11368 chromosome, complete genomeregulatory protein7e-2095.9
NC_013008:1354988:136910313691031369300198Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-2095.9
NC_002695:1417912:142523114252311425428198Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein7e-2095.9
NC_002655:1103991:111339711133971113594198Escherichia coli O157:H7 EDL933, complete genomehypothetical protein7e-2095.9
NC_011750:4390000:439414243941424394378237Escherichia coli IAI39 chromosome, complete genomeputative phage regulatory protein1e-1995.1
NC_004431:4319152:432964443296444329877234Escherichia coli CFT073, complete genomehypothetical protein1e-1995.1
NC_010498:4856011:487603348760334876266234Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator1e-1995.1
NC_008253:3941938:397542639754263975659234Escherichia coli 536, complete genomeputative regulatory protein1e-1995.1
NC_011745:3405520:341461934146193414852234Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1995.1
CU928145:4950723:496570849657084965944237Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative phage regulatory protein1e-1994.7
NC_011748:4950723:496570849657084965944237Escherichia coli 55989, complete genomeconserved hypothetical protein; putative phage regulatory protein1e-1994.7
NC_011083:4547825:458032145803214580494174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, AlpA family3e-1994
NC_011750:4775770:478416447841644784337174Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-1994
NC_016902:4236680:424263542426354242853219Escherichia coli KO11FL chromosome, complete genomephage transcriptional regulator, AlpA3e-1477
CP002516:4236680:424263542426354242853219Escherichia coli KO11, complete genomephage transcriptional regulator, AlpA3e-1477
CP002185:4750571:477001647700164770234219Escherichia coli W, complete genomepredicted AlpA-like transcriptional regulator3e-1477
NC_020418:116500:137273137273137482210Morganella morganii subsp. morganii KT, complete genomeputative regulatory protein6e-1476.3
NC_015663:1869000:187989218798921880185294Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage regulatory protein6e-1476.3
NC_013971:3117000:313278731327873133716930Erwinia amylovora ATCC 49946 chromosome, complete genomeATPase7e-1475.9
NC_015663:549425:570501570501570707207Enterobacter aerogenes KCTC 2190 chromosome, complete genomephage transcriptional regulator AlpA1e-1375.1
NC_004431:279868:282559282559282765207Escherichia coli CFT073, complete genomehypothetical protein1e-1374.7
NC_011751:3453683:350983635098363510096261Escherichia coli UMN026 chromosome, complete genome2e-1374.7
NC_008253:3161311:316248631624863162692207Escherichia coli 536, complete genomeputative regulatory protein2e-1374.7
NC_004431:3409389:348674734867473487007261Escherichia coli CFT073, complete genomehypothetical protein2e-1374.7
NC_016612:2009927:204035620403562040562207Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative regulatory protein2e-1374.3
NC_013716:5201097:523170852317085231914207Citrobacter rodentium ICC168, complete genomepuative transcriptional regulator2e-1374.3
NC_015663:1:270812708127320240Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1373.6
AP010958:3627355:365955836595583659764207Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator4e-1373.6
NC_013353:3627355:365955836595583659764207Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator4e-1373.6
NC_013941:3676146:370774337077433707949207Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator4e-1373.6
NC_010465:3431500:343247334324733432679207Yersinia pseudotuberculosis YPIII, complete genomephage transcriptional regulator, AlpA4e-1373.6
NC_009708:915814:921909921909922118210Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAlpA family protein3e-1373.6
NC_017328:3088907:312241231224123122618207Shigella flexneri 2002017 chromosome, complete genomeRegulator of excision4e-1373.2
NC_004337:3049118:308270830827083082914207Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-1373.2
NC_004741:3041294:307353830735383073744207Shigella flexneri 2a str. 2457T, complete genomehypothetical protein4e-1373.2
NC_012917:3241196:325885132588513259057207Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-1271.6
CP002516:44744:552865528655489204Escherichia coli KO11, complete genomephage transcriptional regulator, AlpA2e-1271.2
CP002185:4035502:405058440505844050787204Escherichia coli W, complete genomehypothetical protein2e-1271.2
NC_016902:44744:552865528655489204Escherichia coli KO11FL chromosome, complete genomephage transcriptional regulator, AlpA2e-1271.2
NC_011415:308825:315998315998316264267Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1270.9
NC_013353:5272863:528282052828205283026207Escherichia coli O103:H2 str. 12009, complete genomeDNA binding protein2e-1270.9
AP010958:5272863:528282052828205283026207Escherichia coli O103:H2 str. 12009 DNA, complete genomeprobable DNA binding protein2e-1270.9
NC_014618:4114004:413381341338134134079267Enterobacter cloacae SCF1 chromosome, complete genomephage transcriptional regulator AlpA3e-1270.5
NC_013421:1505176:150927615092761509488213Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA3e-1270.5
NC_013592:446092:462842462842463054213Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA2e-1168.2
NC_013971:3296272:330740533074053307602198Erwinia amylovora ATCC 49946 chromosome, complete genomephage-regulatory protein3e-1167.4
NC_013961:441719:463698463698463895198Erwinia amylovora, complete genomeUncharacterized protein ORF883e-1167.4
NC_011740:2859933:286231628623162862525210Escherichia fergusonii ATCC 35469, complete genomeputative regulatory protein4e-1166.6
NC_015663:1356982:137202113720211372422402Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator, AlpA family protein9e-0958.9
NC_020260:882307:901042901042901233192Cronobacter sakazakii Sp291, complete genomeputative IS3 family transposase orfB5e-0753.1
NC_014121:3776902:378543237854323785623192Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS3 family transposase orfB5e-0753.1