Pre_GI: BLASTP Hits

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Query: NC_004431:279868:282559 Escherichia coli CFT073, complete genome

Start: 282559, End: 282765, Length: 207

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:3161311:316248631624863162692207Escherichia coli 536, complete genomeputative regulatory protein8e-33138
NC_004431:3409389:348674734867473487007261Escherichia coli CFT073, complete genomehypothetical protein9e-33138
NC_013716:5201097:523170852317085231914207Citrobacter rodentium ICC168, complete genomepuative transcriptional regulator2e-32137
NC_011751:3453683:350983635098363510096261Escherichia coli UMN026 chromosome, complete genome3e-32137
NC_013941:3676146:370774337077433707949207Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator2e-31134
NC_013353:3627355:365955836595583659764207Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator2e-31134
AP010958:3627355:365955836595583659764207Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator2e-31134
NC_004741:3041294:307353830735383073744207Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-31133
NC_004337:3049118:308270830827083082914207Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-31133
NC_017328:3088907:312241231224123122618207Shigella flexneri 2002017 chromosome, complete genomeRegulator of excision3e-31133
NC_015663:549425:570501570501570707207Enterobacter aerogenes KCTC 2190 chromosome, complete genomephage transcriptional regulator AlpA5e-25113
NC_020418:116500:137273137273137482210Morganella morganii subsp. morganii KT, complete genomeputative regulatory protein1e-24111
NC_011415:308825:315998315998316264267Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-24109
NC_013592:446092:462842462842463054213Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA1e-23108
NC_014618:4114004:413381341338134134079267Enterobacter cloacae SCF1 chromosome, complete genomephage transcriptional regulator AlpA2e-23107
NC_012917:3241196:325885132588513259057207Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-23107
NC_010465:3431500:343247334324733432679207Yersinia pseudotuberculosis YPIII, complete genomephage transcriptional regulator, AlpA4e-23106
NC_009708:915814:921909921909922118210Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAlpA family protein2e-22104
NC_013353:5272863:528282052828205283026207Escherichia coli O103:H2 str. 12009, complete genomeDNA binding protein2e-22103
AP010958:5272863:528282052828205283026207Escherichia coli O103:H2 str. 12009 DNA, complete genomeprobable DNA binding protein2e-22103
NC_013421:1505176:150927615092761509488213Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA6e-22102
NC_013971:3296272:330740533074053307602198Erwinia amylovora ATCC 49946 chromosome, complete genomephage-regulatory protein3e-21100
NC_013961:441719:463698463698463895198Erwinia amylovora, complete genomeUncharacterized protein ORF883e-21100
NC_016612:2009927:204035620403562040562207Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative regulatory protein7e-2199
NC_015663:1:270812708127320240Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-2097.8
NC_016902:4236680:424263542426354242853219Escherichia coli KO11FL chromosome, complete genomephage transcriptional regulator, AlpA6e-2096.3
CP002516:4236680:424263542426354242853219Escherichia coli KO11, complete genomephage transcriptional regulator, AlpA6e-2096.3
CP002185:4750571:477001647700164770234219Escherichia coli W, complete genomepredicted AlpA-like transcriptional regulator6e-2096.3
NC_011750:4390000:439414243941424394378237Escherichia coli IAI39 chromosome, complete genomeputative phage regulatory protein7e-2095.9
NC_011748:4950723:496570849657084965944237Escherichia coli 55989, complete genomeconserved hypothetical protein; putative phage regulatory protein7e-2095.9
CU928145:4950723:496570849657084965944237Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative phage regulatory protein7e-2095.9
NC_004431:4319152:432964443296444329877234Escherichia coli CFT073, complete genomehypothetical protein7e-2095.9
NC_010498:4856011:487603348760334876266234Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator7e-2095.9
NC_008253:3941938:397542639754263975659234Escherichia coli 536, complete genomeputative regulatory protein7e-2095.9
NC_011745:3405520:341461934146193414852234Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-2095.9
NC_015663:1869000:187989218798921880185294Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage regulatory protein1e-1892
NC_016902:44744:552865528655489204Escherichia coli KO11FL chromosome, complete genomephage transcriptional regulator, AlpA4e-1890.1
CP002185:4035502:405058440505844050787204Escherichia coli W, complete genomehypothetical protein4e-1890.1
CP002516:44744:552865528655489204Escherichia coli KO11, complete genomephage transcriptional regulator, AlpA4e-1890.1
NC_011083:4547825:458032145803214580494174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, AlpA family2e-1787.8
NC_011750:4775770:478416447841644784337174Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-1787.8
NC_013364:1306756:131724813172481317445198Escherichia coli O111:H- str. 11128, complete genomeputative DNA binding protein2e-1684.7
NC_013361:1335166:134566313456631345860198Escherichia coli O26:H11 str. 11368 chromosome, complete genomeregulatory protein2e-1684.7
NC_013008:1354988:136910313691031369300198Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1684.7
NC_002695:1417912:142523114252311425428198Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1684.7
NC_002655:1103991:111339711133971113594198Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1684.7
NC_011740:2859933:286231628623162862525210Escherichia fergusonii ATCC 35469, complete genomeputative regulatory protein1e-1581.6
NC_004431:279868:288649288649288786138Escherichia coli CFT073, complete genomehypothetical protein1e-1374.7
NC_015663:1356982:137202113720211372422402Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator, AlpA family protein4e-1270.1
NC_013971:3117000:313278731327873133716930Erwinia amylovora ATCC 49946 chromosome, complete genomeATPase4e-1167
NC_020260:882307:901042901042901233192Cronobacter sakazakii Sp291, complete genomeputative IS3 family transposase orfB5e-1166.6
NC_014121:3776902:378543237854323785623192Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS3 family transposase orfB5e-1166.6
NC_009662:1329788:133831513383151338509195Nitratiruptor sp. SB155-2, complete genometranscriptional regulator9e-0855.8
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage2e-0754.3
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage3e-0753.9
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)3e-0753.9
NC_008800:1090000:109849810984981098698201Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-0753.9
NC_009436:3117661:314615831461583146364207Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA7e-0752.8
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein1e-0652.4
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein1e-0652.4
NC_010067:191190:199577199577199783207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0652
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-0651.2