Pre_GI: BLASTN Hits

Some Help

Query: NC_004347:791897 Shewanella oneidensis MR-1, complete genome

Start: 791897, End: 812649, Length: 20753

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome07610BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence07351BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome07313BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome05660BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome0900BLASTN svgBLASTP svg
NC_009901:40281754028175404725419080Shewanella pealeana ATCC 700345, complete genome5e-174618BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome1e-137498BLASTN svgBLASTP svg
NC_004347:44411104441110446506923960Shewanella oneidensis MR-1, complete genome8e-133482BLASTN svgBLASTP svg
NC_008321:45881145881148011921309Shewanella sp. MR-4, complete genome7e-130472BLASTN svgBLASTP svg
NC_008322:1186000*1186000121709931100Shewanella sp. MR-7, complete genome1e-125458BLASTN svgBLASTP svg
NC_008700:2701500*2701500273890037401Shewanella amazonensis SB2B, complete genome1e-79305BLASTN svgBLASTP svg
NC_006512:22116542211654223820326550Idiomarina loihiensis L2TR, complete genome2e-34155BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome1e-32149BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome1e-29139BLASTN svgBLASTP svg
NC_015556:51564151564153855622916Pseudomonas fulva 12-X chromosome, complete genome8e-28133BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome2e-25125BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome2e-25125BLASTN svgBLASTP svg
NC_012660:37448683744868377123626369Pseudomonas fluorescens SBW25 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome3e-24121BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-24121BLASTN svgBLASTP svg
NC_018691:359695*35969537768217988Alcanivorax dieselolei B5 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome5e-23117BLASTN svgBLASTP svg
NC_009997:23529482352948238309930152Shewanella baltica OS195, complete genome5e-20107BLASTN svgBLASTP svg
NC_009831:44479194447919447190923991Shewanella sediminis HAW-EB3, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_014532:22680782268078229613528058Halomonas elongata DSM 2581, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015161:2060369*2060369208509924731Deinococcus proteolyticus MRP chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009997:41580841580843409918292Shewanella baltica OS195, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018691:318662*31866234772429063Alcanivorax dieselolei B5 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008700:39278963927896394744119546Shewanella amazonensis SB2B, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_018868:29355802935580295799622417Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008025:1998500*1998500202271224213Deinococcus geothermalis DSM 11300, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009052:21076922107692213162923938Shewanella baltica OS155, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_005126:42105004210500424678336284Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-0661.9BLASTN svgBLASTP svg