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Query: NC_004347:4211241 Shewanella oneidensis MR-1, complete genome

Start: 4211241, End: 4236439, Length: 25199

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009052:4437649*4437649446134423696Shewanella baltica OS155, complete genome02365BLASTN svgBLASTP svg
NC_008321:97750097750099979522296Shewanella sp. MR-4, complete genome3e-68268BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome6e-60240BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome2e-59238BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome4e-58234BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome9e-19103BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010102:21785942178594220346224869Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1179.8BLASTN svgBLASTP svg
NC_003197:92000092000094439424395Salmonella typhimurium LT2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_006905:94641894641897214125724Salmonella enterica subsp. enterica serovar Choleraesuis str8e-1073.8BLASTN svgBLASTP svg
NC_011080:92432692432694696322638Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-1073.8BLASTN svgBLASTP svg
NC_011083:96726096726098909921840Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-1073.8BLASTN svgBLASTP svg
NC_012917:1923059*1923059194769524637Pectobacterium carotovorum subsp. carotovorum PC1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009901:22722062272206230998537780Shewanella pealeana ATCC 700345, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013508:2356865*2356865238859931735Edwardsiella tarda EIB202, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014012:25653292565329258573220404Shewanella violacea DSS12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009831:45399524539952458002840077Shewanella sediminis HAW-EB3, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome3e-0661.9BLASTN svgBLASTP svg