Pre_GI: BLASTN Hits

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Query: NC_004347:1038253 Shewanella oneidensis MR-1, complete genome

Start: 1038253, End: 1070537, Length: 32285

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:27250027250029566023161Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-18101BLASTN svgBLASTP svg
NC_010611:79735179735182014222792Acinetobacter baumannii ACICU, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009085:89360189360191657222972Acinetobacter baumannii ATCC 17978, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005966:71559171559173850722917Acinetobacter sp. ADP1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014259:33690003369000338959720598Acinetobacter sp. DR1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_013851:2729000*2729000275222523226Allochromatium vinosum DSM 180 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014318:52901052901055033621327Amycolatopsis mediterranei U32 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007760:28974092897409291699319585Anaeromyxobacter dehalogenans 2CP-C, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011145:14357421435742145821622475Anaeromyxobacter sp. K, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008702:1514707*1514707153954024834Azoarcus sp. BH72, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_004463:1520303*1520303154802027718Bradyrhizobium japonicum USDA 110, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_013194:43052054305205432971824514Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete4e-0661.9BLASTN svgBLASTP svg
NC_007298:10298411029841105396624126Dechloromonas aromatica RCB, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014972:23282282328228236343935212Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013961:24411482441148246091119764Erwinia amylovora, complete genome2e-60242BLASTN svgBLASTP svg
NC_012214:14384761438476146005421579Erwinia pyrifoliae Ep1/96, complete genome5e-58234BLASTN svgBLASTP svg
NC_010694:13242501324250134559221343Erwinia tasmaniensis, complete genome4e-52214BLASTN svgBLASTP svg
NC_000913:23739842373984239819324210Escherichia coli K12, complete genome1e-86329BLASTN svgBLASTP svg
NC_010473:24658442465844248995824115Escherichia coli str. K-12 substr. DH10B, complete genome1e-86329BLASTN svgBLASTP svg
AC_000091:23796702379670240484125172Escherichia coli W3110 DNA, complete genome1e-86329BLASTN svgBLASTP svg
NC_007777:135222*13522216590830687Frankia sp. CcI3, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014666:36296963629696364909919404Frankia sp. EuI1c chromosome, complete genome7e-23117BLASTN svgBLASTP svg
NC_014973:50995435099543513368034138Geobacter sp. M18 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014815:658893*65889368838329491Micromonospora sp. L5 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013960:25923892592389261181519427Nitrosococcus halophilus Nc4 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010554:18710001871000189502424025Proteus mirabilis HI4320, complete genome1e-18103BLASTN svgBLASTP svg
NC_014800:32986132986135277422914Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete2e-0765.9BLASTN svgBLASTP svg
NC_007204:69697269697272009923128Psychrobacter arcticus 273-4, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_018419:86250086250088609923600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,7e-20107BLASTN svgBLASTP svg
NC_015437:16419416419418725523062Selenomonas sputigena ATCC 35185 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009052:4437649*4437649446134423696Shewanella baltica OS155, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009052:144619*14461916288518267Shewanella baltica OS155, complete genome02083BLASTN svgBLASTP svg
NC_009052:1211989*1211989123680124813Shewanella baltica OS155, complete genome02083BLASTN svgBLASTP svg
NC_009052:4168776*4168776418945120676Shewanella baltica OS155, complete genome01653BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence01130BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_009997:23529482352948238309930152Shewanella baltica OS195, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009997:36610833661083368965128569Shewanella baltica OS195, complete genome02220BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome02210BLASTN svgBLASTP svg
NC_009997:72684072684075726930430Shewanella baltica OS195, complete genome1e-80309BLASTN svgBLASTP svg
NC_009997:41580841580843409918292Shewanella baltica OS195, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007954:2440000*2440000246325523256Shewanella denitrificans OS217, complete genome0787BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence02454BLASTN svgBLASTP svg
NC_004347:3670145*3670145369364023496Shewanella oneidensis MR-1, complete genome02492BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome02464BLASTN svgBLASTP svg
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome2e-32149BLASTN svgBLASTP svg
NC_004347:44411104441110446506923960Shewanella oneidensis MR-1, complete genome02452BLASTN svgBLASTP svg
NC_004347:4211241*4211241423643925199Shewanella oneidensis MR-1, complete genome5e-58234BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome6e-39170BLASTN svgBLASTP svg
NC_009901:42162064216206423672120516Shewanella pealeana ATCC 700345, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009831:45399524539952458002840077Shewanella sediminis HAW-EB3, complete genome1e-98369BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome9e-35157BLASTN svgBLASTP svg
NC_008321:97750097750099979522296Shewanella sp. MR-4, complete genome04482BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome5e-30141BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome04448BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome8e-32147BLASTN svgBLASTP svg
NC_010506:49515004951500497315021651Shewanella woodyi ATCC 51908, complete genome6e-85323BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010162:10764788*107647881078955024763Sorangium cellulosum 'So ce 56', complete genome3e-1695.6BLASTN svgBLASTP svg
NC_008786:18688186884262323936Verminephrobacter eiseniae EF01-2, complete genome1e-33153BLASTN svgBLASTP svg
NC_002506:207097*20709723205424958Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete1e-24123BLASTN svgBLASTP svg
NC_014228:28120002812000283429522296Xenorhabdus nematophila ATCC 19061, complete genome2e-48202BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0663.9BLASTN svgBLASTP svg
NC_015224:31910003191000321042819429Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-75289BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0971.9BLASTN svgBLASTP svg
NC_015224:61080761080762877617970Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0661.9BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0971.9BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0971.9BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome3e-62248BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome7e-60240BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome7e-60240BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome7e-60240BLASTN svgBLASTP svg
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome7e-60240BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome4e-55224BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome4e-55224BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome4e-55224BLASTN svgBLASTP svg