Pre_GI: BLASTP Hits

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Query: NC_004347:4302768:4333899 Shewanella oneidensis MR-1, complete genome

Start: 4333899, End: 4335077, Length: 1179

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015424:1603000:1622142162214216233321191Aeromonas veronii B565 chromosome, complete genomeFliU-like protein4e-47189
NC_008800:2695977:2714907271490727161121206Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellin lysine-N-methylase4e-46186
NC_015224:2017781:2037669203766920388741206Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellin lysine-N-methylase2e-45183
NC_018664:239000:2560362560362572771242Clostridium acidurici 9a chromosome, complete genomeflagellin lysine-N-methylase FliB2e-33143
NC_016631:297222:3220203220203233001281Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein3e-26119
NC_014098:3030274:3046234304623430474871254Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein6e-24112
NC_003366:981105:9820279820279832711245Clostridium perfringens str. 13, complete genomehypothetical protein9e-23108
NC_019897:128610:1825611825611838141254Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein6e-1995.5
NC_015711:3193774:3197071319707131983511281Myxococcus fulvus HW-1 chromosome, complete genomeFliB family protein1e-1378.2
NC_015275:3299923:3300414330041433015951182Clostridium lentocellum DSM 5427 chromosome, complete genomeflagellin lysine-N-methylase1e-1378.2
NC_008262:904000:911480911480911824345Clostridium perfringens SM101, complete genomeFliB domain protein9e-1168.2
NC_015565:1920329:1937803193780319390501248Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein7e-1065.5
NC_015589:1240197:1258098125809812593211224Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein2e-0963.5