Pre_GI: BLASTP Hits

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Query: NC_004347:4302768:4326131 Shewanella oneidensis MR-1, complete genome

Start: 4326131, End: 4327135, Length: 1005

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017192:1063955:106999310699931070919927Arcobacter sp. L, complete genomeputative polysaccharide deacetylase1e-32140
NC_010623:1871492:191206019120601912875816Burkholderia phymatum STM815 chromosome 2, complete sequencepolysaccharide deacetylase7e-0961.6
NC_011832:820658:855762855762856685924Candidatus Methanosphaerula palustris E1-9c, complete genomepolysaccharide deacetylase4e-0962.4
NC_010995:671389:688838688838689734897Cellvibrio japonicus Ueda107, complete genomepolysaccharide deacetylase protein, putative, pda4B7e-29128
NC_010995:4083960:410826241082624109128867Cellvibrio japonicus Ueda107, complete genomepolysaccharide deacetylase, putative, pda4C4e-0755.8
NC_013739:2106662:213531321353132136215903Conexibacter woesei DSM 14684, complete genomepolysaccharide deacetylase1e-1067.4
NC_010002:2293670:229592822959282296803876Delftia acidovorans SPH-1, complete genomepolysaccharide deacetylase1e-1480.9
NC_010002:2293670:231604723160472317003957Delftia acidovorans SPH-1, complete genomeurate catabolism protein2e-21103
NC_015563:5162177:518298451829845183859876Delftia sp. Cs1-4 chromosome, complete genomepolysaccharide deacetylase1e-1480.9
NC_016514:1627664:165020416502041651142939Enterobacter cloacae EcWSU1 chromosome, complete genomepolysaccharide Deacetylase3e-23109
NC_020210:1275031:131125713112571312117861Geobacillus sp. GHH01, complete genomepolysaccharide deacetylase7e-1478.2
NC_014650:3589604:359136435913643592098735Geobacillus sp. Y4.1MC1 chromosome, complete genomepolysaccharide deacetylase2e-0860.1
NC_015660:3643370:364638236463823647110729Geobacillus thermoglucosidasius C56-YS93 chromosome, completepolysaccharide deacetylase3e-0859.7
NC_007517:2241104:224331222433122244154843Geobacter metallireducens GS-15, complete genomePolysaccharide deacetylase2e-0860.1
NC_015497:3739556:376112837611283761967840Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily7e-0755.1
NC_019978:686362:689294689294690064771Halobacteroides halobius DSM 5150, complete genomeputative xylanase/chitin deacetylase2e-0653.5
NC_013201:145973:145973145973146869897Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completepolysaccharide deacetylase4e-1065.9
NC_012982:1569426:158665015866501587570921Hirschia baltica ATCC 49814, complete genomepolysaccharide deacetylase2e-1583.2
NC_012982:1569426:158756015875601588468909Hirschia baltica ATCC 49814, complete genomepolysaccharide deacetylase6e-1478.6
NC_016612:5231065:527899252789925279873882Klebsiella oxytoca KCTC 1686 chromosome, complete genomeCyclic imide hydrolase9e-1684.7
NC_011283:2627050:263016326301632631095933Klebsiella pneumoniae 342 chromosome, complete genomeurate catabolism protein3e-23109
NC_012731:2693091:270320627032062704138933Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative polysaccharide deacetylase2e-23110
NC_016845:2729654:274534927453492746188840Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,urate catabolism protein2e-20100
NC_009648:1956070:196958619695861970518933Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative polysaccharide deacetylase1e-23110
NC_013850:2624899:262801226280122628944933Klebsiella variicola At-22 chromosome, complete genomeurate catabolism protein2e-23110
NC_017506:3717261:372957637295763730442867Marinobacter adhaerens HP15 chromosome, complete genomepolysaccharide deacetylase family protein3e-1169.3
NC_010511:4696868:470699147069914707653663Methylobacterium sp. 4-46 chromosome, complete genomechitin deacetylase4e-22105
NC_015572:1421782:145045514504551451321867Methylomonas methanica MC09 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily1e-0860.8
NC_017955:3057592:305669930566993057595897Modestobacter marinus, complete genomepolysaccharide deacetylase6e-1375.1
NC_008596:4196194:421125942112594212110852Mycobacterium smegmatis str. MC2 155, complete genomepolysaccharide deacetylase family protein8e-1684.7
NC_018681:5695343:571241557124155713284870Nocardia brasiliensis ATCC 700358 chromosome, complete genomepolysaccharide deacetylase3e-1375.9
NC_008228:1404126:141382314138231414668846Pseudoalteromonas atlantica T6c, complete genomepolysaccharide deacetylase6e-0755.1
NC_012660:2143376:216172721617272162608882Pseudomonas fluorescens SBW25 chromosome, complete genomeputative polysaccharide deacetylase1e-1480.9
NC_015733:1976752:199243619924361993092657Pseudomonas putida S16 chromosome, complete genomeurate catabolism protein7e-34144
NC_017047:2079368:209035720903572091238882Rahnella aquatilis HX2 chromosome, complete genomeCyclic imide hydrolase2e-1686.7
NC_008314:477722:487881487881488759879Ralstonia eutropha H16 chromosome 2, complete sequencechitooligosaccharide deacetylase7e-1375.1
NC_011958:1031592:106842910684291069331903Rhodobacter sphaeroides KD131 chromosome 2, complete genomePolysaccharide deacetylase8e-1684.7
NC_009380:4184695:4200363420036342014991137Salinispora tropica CNB-440 chromosome, complete genomepolysaccharide deacetylase2e-1273.2
NC_015761:2982000:299749029974902998413924Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-1377.4
NC_011149:3187022:320846632084663209389924Salmonella enterica subsp. enterica serovar Agona str. SL483,polysaccharide deacetylase domain protein2e-1480.1
NC_011147:3075186:309668230966823097605924Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1479.3
NC_006511:3079512:310100831010083101931924Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-1479.3
NC_003198:3126548:314803331480333148956924Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1479.7
NC_016832:3100683:312216831221683123091924Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Polysaccharide deacetylase domain protein2e-1479.7
NC_004631:3112043:313352831335283134451924Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1479.7
NC_008043:499399:4993994993995008141416Silicibacter sp. TM1040 mega plasmid, complete sequencepolysaccharide deacetylase1e-26120
NC_019892:6801246:6808924680892468099911068Singulisphaera acidiphila DSM 18658 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily5e-0755.5
NC_016582:7946000:796321379632137964013801Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative deacetylase1e-0653.9
NC_012997:2059092:209738120973812098364984Teredinibacter turnerae T7901, complete genomecarbohydrate esterase family 4 domain protein1e-30134
NC_019970:1343670:134493613449361345643708Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative xylanase/chitin deacetylase5e-1065.5
NC_012691:2146473:215020721502072151130924Tolumonas auensis DSM 9187, complete genomeurate catabolism protein2e-30133
NC_008786:3915000:393196539319653932885921Verminephrobacter eiseniae EF01-2, complete genomepolysaccharide deacetylase2e-1067
NC_008786:3915000:393079439307943931735942Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein4e-1479
NC_009381:1783886:182352618235261824476951Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-23109