Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:3670145:3682156 Shewanella oneidensis MR-1, complete genome

Start: 3682156, End: 3683094, Length: 939

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009665:1332751:133922813392281340196969Shewanella baltica OS185 chromosome, complete genometype IV pilus assembly protein PilW9e-162569
NC_009052:1211989:122009412200941221062969Shewanella baltica OS155, complete genometype IV pilus assembly protein PilW2e-161568
NC_016901:1367443:137554813755481376516969Shewanella baltica OS678 chromosome, complete genomehypothetical protein6e-161566
NC_009997:1368471:137495113749511375919969Shewanella baltica OS195, complete genometype IV pilus assembly protein PilW6e-161566
NC_011663:3818886:383223438322343833202969Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-160565
NC_008322:3585601:3597785359778535987861002Shewanella sp. MR-7, complete genomePrepilin-type cleavage/methylation-like protein1e-117423
NC_008577:3738758:375702037570203758012993Shewanella sp. ANA-3 chromosome 1, complete sequencePrepilin-type cleavage/methylation-like protein1e-115416
NC_008700:1115436:112186811218681122842975Shewanella amazonensis SB2B, complete genometype IV pilus assembly protein PilW2e-113408
NC_009092:1263964:127254812725481273534987Shewanella loihica PV-4, complete genomeprepilin-type cleavage/methylation-like protein5e-110397
NC_008321:3512471:3526893352689335279061014Shewanella sp. MR-4, complete genomePrepilin-type cleavage/methylation-like protein3e-107388
NC_009901:1309724:131631413163141317303990Shewanella pealeana ATCC 700345, complete genometype IV pilus assembly protein PilW4e-102371
NC_015424:3890293:390240039024003903356957Aeromonas veronii B565 chromosome, complete genomeTppC2e-37156
NC_011901:3363500:3376823337682333778481026Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-0756.6
NC_007508:3183631:3207702320770232088591158Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomePilW-related protein3e-0756.2
NC_006834:3422985:3437218343721834383841167Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein6e-0755.1
NC_010717:3564955:3576850357685035780161167Xanthomonas oryzae pv. oryzae PXO99A, complete genomeprepilin-type N-terminal cleavage/methylation domain protein6e-0755.1
NC_007705:3429493:3441485344148534426511167Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein6e-0755.1
NC_017267:2955946:2968835296883529700011167Xanthomonas oryzae pv. oryzicola BLS256 chromosome, complete6e-0755.1