Pre_GI: BLASTP Hits

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Query: NC_004347:3303957:3321791 Shewanella oneidensis MR-1, complete genome

Start: 3321791, End: 3322741, Length: 951

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014972:322056:3558253558253569941170Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase1e-1790.5
NC_018645:2690325:2695894269589426970871194Desulfobacula toluolica Tol2, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase family protein2e-1687
NC_008789:1669082:1707108170710817083401233Halorhodospira halophila SL1, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-1686.3
NC_007517:2241104:2255485225548522566511167Geobacter metallireducens GS-15, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-1377
NC_015857:531314:5420965420965431991104Brucella pinnipedialis B2/94 chromosome chromosome 1, completeperosamine synthetase3e-1272.8
NC_006932:531000:5414185414185425211104Brucella abortus biovar 1 str. 9-941 chromosome I, completeperosamine synthase, hypothetical4e-1272.4
NC_007618:526400:5377135377135388161104Brucella melitensis biovar Abortus 2308 chromosome I, completeDegT/DnrJ/EryC1/StrS aminotransferase4e-1272.4
NC_010742:529500:5397345397345408371104Brucella abortus S19 chromosome 1, complete sequenceDegT/DnrJ/EryC1/StrS aminotransferase4e-1272.4
NC_003317:1443874:1462106146210614632481143Brucella melitensis 16M chromosome I, complete sequencePEROSAMINE SYNTHETASE4e-1272.4
NC_012441:529500:5399045399045410071104Brucella melitensis ATCC 23457 chromosome I, complete sequenceL-glutamine:2-deoxy-scyllo-inosose aminotransferase4e-1272.4
NC_016795:1857296:1875566187556618766691104Brucella abortus A13334 chromosome 1, complete sequenceL-glutamine:2-deoxy-scyllo-inosose aminotransferase4e-1272.4
NC_017244:529500:5398895398895409921104Brucella melitensis M28 chromosome chromosome 1, complete sequenceDegT/DnrJ/EryC1/StrS aminotransferase4e-1272.4
NC_017246:528825:5401365401365412391104Brucella melitensis M5-90 chromosome chromosome I, completeL-glutamine:2-deoxy-scyllo-inosose aminotransferase4e-1272.4
NC_017248:529500:5399505399505410531104Brucella melitensis NI chromosome chromosome I, complete sequenceL-glutamine:2-deoxy-scyllo-inosose aminotransferase4e-1272.4
NC_013119:511500:5219215219215230241104Brucella microti CCM 4915 chromosome 1, complete sequenceperosamine synthase, putative3e-1272.4
NC_004310:508483:5197965197965208991104Brucella suis 1330 chromosome I, complete sequenceperosamine synthase, putative5e-1272
NC_010169:527500:5377845377845388871104Brucella suis ATCC 23445 chromosome I, complete sequenceL-glutamine:2-deoxy-scyllo-inosose aminotransferase5e-1272
NC_010103:507482:5184395184395195421104Brucella canis ATCC 23365 chromosome I, complete sequenceL-glutamine:2-deoxy-scyllo-inosose aminotransferase5e-1272
NC_016778:515525:5338005338005349031104Brucella canis HSK A52141 chromosome 1, complete sequenceperosamine synthetase5e-1272
NC_016797:508414:5197275197275208301104Brucella suis VBI22 chromosome I, complete sequenceperosamine synthase5e-1272
NC_017251:508469:5197825197825208851104Brucella suis 1330 chromosome I, complete genomeperosamine synthase5e-1272
NC_014654:391201:3921733921733932581086Halanaerobium sp. 'sapolanicus' chromosome, complete genomeGlutamine--scyllo-inositol transaminase6e-1271.6
NC_008570:3220539:3259386325938632604741089Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeperosamine synthetase, Per protein1e-1067.4
NC_009505:531000:541417541417542184768Brucella ovis ATCC 25840 chromosome I, complete sequenceaminotransferase1e-1067.4
NC_002655:2839600:2852335285233528534291095Escherichia coli O157:H7 EDL933, complete genomeperosamine synthetase5e-1065.5
NC_011353:2734222:2746956274695627480501095Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDegT/DnrJ/EryC1/StrS family aminotransferase5e-1065.5
NC_013008:2733203:2745937274593727470311095Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeperosamine synthetase5e-1065.5
NC_015224:1763848:1775650177565017767351086Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Perosamine synthetase, Per protein5e-1065.5
NC_002695:2769387:2782121278212127832211101Escherichia coli O157:H7 str. Sakai, complete genomeperosamine synthetase5e-1065.5
NC_020126:6019850:6046915604691560480931179Myxococcus stipitatus DSM 14675, complete genomeaminotransferase6e-1065.1
NC_013410:3280039:3283711328371132849731263Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DegT/DnrJ/EryC1/StrS aminotransferase2e-0963.5
NC_010803:301753:3181323181323192981167Chlorobium limicola DSM 245, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase4e-0962.4
NC_012918:3009211:3031840303184030329281089Geobacter sp. M21 chromosome, complete genomeglutamine--scyllo-inositol transaminase9e-0961.2
NC_014960:1910202:1914562191456219157011140Anaerolinea thermophila UNI-1, complete genomeputative aminotransferase1e-0860.8
NC_013791:1291339:1302620130262013037501131Bacillus pseudofirmus OF4 chromosome, complete genomeaminotransferase family protein2e-0860.1
NC_011369:4395773:4400360440036044014841125Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeglutamine--scyllo-inositol transaminase2e-0859.7
NC_008346:800500:817770817770818654885Syntrophomonas wolfei subsp. wolfei str. Goettingen, completepyridoxal phosphate-dependent enzyme3e-0859.3
NC_002505:238569:2504552504552515581104Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeperosamine synthase3e-0859.3
NC_009457:2764972:2776858277685827779611104Vibrio cholerae O395 chromosome 2, complete sequenceperosamine synthase3e-0859.3
NC_012578:224559:2364432364432375461104Vibrio cholerae M66-2 chromosome I, complete sequenceperosamine synthase3e-0859.3
NC_012582:272320:2842062842062853091104Vibrio cholerae O395 chromosome chromosome I, complete sequenceperosamine synthase3e-0859.3
NC_012668:368305:3874283874283885311104Vibrio cholerae MJ-1236 chromosome 1, complete sequenceUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase3e-0859.3
NC_016445:2663837:2675723267572326768261104Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeperosamine synthase3e-0859.3
NC_016944:238580:2504662504662515691104Vibrio cholerae IEC224 chromosome I, complete sequenceperosamine synthase3e-0859.3
NC_017270:220282:2334482334482345511104Vibrio cholerae LMA3984-4 chromosome chromosome I, completePerosamine synthase3e-0859.3
NC_016584:5305417:5325285532528553274322148Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein5e-0858.9
NC_010645:73573:9486894868960461179Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein7e-0858.2
NC_013665:738883:7551987551987563671170Methanocella paludicola SANAE, complete genomeputative aminotransferase7e-0858.2
NC_000868:1107639:1114429111442911155291101Pyrococcus abyssi GE5, complete genomeaspartate aminotransferase8e-0858.2
NC_015320:470988:4806324806324817471116Archaeoglobus veneficus SNP6 chromosome, complete genomeglutamine--scyllo-inositol transaminase1e-0757.8
NC_007796:3351962:3368737336873733699121176Methanospirillum hungatei JF-1, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase1e-0757.8
NC_007955:1664998:1685782168578216869001119Methanococcoides burtonii DSM 6242, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase2e-0757
NC_014376:597000:6235776235776246801104Clostridium saccharolyticum WM1 chromosome, complete genomeGlutamine--scyllo-inositol transaminase3e-0756.6
NC_019974:2179000:2182425218242521836031179Natronococcus occultus SP4, complete genomeputative PLP-dependent enzyme possibly involved in cell wall biogenesis3e-0756.6
NC_019978:2260395:2263976226397622651181143Halobacteroides halobius DSM 5150, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase3e-0755.8
NC_008228:3679949:3692981369298136940931113Pseudoalteromonas atlantica T6c, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase4e-0755.8
NC_009719:3532587:3555397355539735565331137Parvibaculum lavamentivorans DS-1 chromosome, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase4e-0755.5
NC_009454:2663539:2680416268041626815431128Pelotomaculum thermopropionicum SI, complete genomepyridoxal phosphate-dependent enzyme5e-0755.5
NC_008593:609723:6290536290536301741122Clostridium novyi NT, complete genomepleiotropic regulatory protein9e-0754.7
NC_014011:1760793:1765665176566517667951131Aminobacterium colombiense DSM 12261 chromosome, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase8e-0754.7
NC_003413:748906:7596917596917607851095Pyrococcus furiosus DSM 3638, complete genomepleiotropic regulatory protein degT8e-0754.7
NC_009725:3602632:3620620362062036217891170Bacillus amyloliquefaciens FZB42, complete genomeSpsC1e-0653.9
NC_009802:1525144:1548417154841715496311215Campylobacter concisus 13826, complete genomeputative integral membrane protein4e-0652.8
NC_018604:128113:1388631388631401881326Brachyspira pilosicoli WesB complete genomeDegT/DnrJ/EryC1/StrS aminotransferase4e-0652.4
NC_014222:1045281:1055927105592710570391113Methanococcus voltae A3 chromosome, complete genomeGlutamine--scyllo-inositol transaminase5e-0652.4
NC_005139:305420:3136013136013147521152Vibrio vulnificus YJ016 chromosome I, complete sequencelipopolysaccharide biosynthesis protein6e-0652
NC_015672:399522:4018634018634029361074Flexistipes sinusarabici DSM 4947 chromosome, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase7e-0651.6