Pre_GI: BLASTP Hits

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Query: NC_004347:3303957:3315430 Shewanella oneidensis MR-1, complete genome

Start: 3315430, End: 3316191, Length: 762

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014935:1704816:171571417157141716502789Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeformyl transferase domain protein2e-1376.6
NC_013223:724394:737994737994738989996Desulfohalobium retbaense DSM 5692, complete genomeformyl transferase domain protein6e-1064.7
NC_017179:281069:288977288977289570594Clostridium difficile BI1, complete genomephosphoribosylglycinamide formyltransferase2e-0963.2
NC_015672:203139:203139203139204116978Flexistipes sinusarabici DSM 4947 chromosome, complete genomemethionyl-tRNA formyltransferase6e-0961.2
NC_011831:2728932:274217127421712742815645Chloroflexus aggregans DSM 9485, complete genomeformyl transferase domain protein2e-0859.7
NC_012918:3009211:303111530311153031843729Geobacter sp. M21 chromosome, complete genomeformyl transferase3e-0858.9
NC_013192:171000:171547171547172497951Leptotrichia buccalis DSM 1135, complete genomemethionyl-tRNA formyltransferase1e-0757
NC_010545:404111:416079416079416978900Corynebacterium urealyticum DSM 7109, complete genomeputative formyltransferase3e-0755.8
NC_007164:2046937:206666720666672067611945Corynebacterium jeikeium K411, complete genomeputative formyltransferase3e-0755.8
NC_015391:2488450:249891424989142499498585Carnobacterium sp. 17-4 chromosome, complete genomephosphoribosylglycinamide formyltransferase3e-0755.8
NC_002928:123126:135205135205136029825Bordetella parapertussis 12822, complete genomeputative formyl transferase6e-0754.7
NC_007517:3751107:375394837539483754883936Geobacter metallireducens GS-15, complete genomeMethionyl-tRNA formyltransferase8e-0754.3
NC_020418:2718500:273870227387022739334633Morganella morganii subsp. morganii KT, complete genomePhosphoribosylglycinamide formyltransferase8e-0754.3
NC_008346:800500:818645818645819526882Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeMethionyl-tRNA formyltransferase-like protein1e-0653.9
NC_010516:2877407:289080628908062891693888Clostridium botulinum B1 str. Okra, complete genomebifunctional polymyxin resistance protein ArnA2e-0653.1
NC_013093:1213908:121735212173521218302951Actinosynnema mirum DSM 43827, complete genomeformyl transferase domain protein2e-0652.8
NC_007517:2241104:226588822658882266700813Geobacter metallireducens GS-15, complete genomeFormyl transferase-like2e-0652.8
NC_015510:1978539:197853919785391979435897Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomemethionyl-tRNA formyltransferase3e-0652
NC_007759:1666967:167196016719601672631672Syntrophus aciditrophicus SB, complete genomephosphoribosylglycinamide formyltransferase5e-0651.6
NC_014657:944000:944033944033944953921Caldicellulosiruptor owensensis OL chromosome, complete genomemethionyl-tRNA formyltransferase6e-0651.2
NC_006087:2008000:202548320254832026076594Leifsonia xyli subsp. xyli str. CTCB07, complete genome5'-phosphoribosylglycinamide formyltransferase7e-0651.2
NC_009253:2577316:258720325872032587814612Desulfotomaculum reducens MI-1 chromosome, complete genomephosphoribosylglycinamide formyltransferase8e-0650.8