Pre_GI: BLASTP Hits

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Query: NC_004347:3197219:3218125 Shewanella oneidensis MR-1, complete genome

Start: 3218125, End: 3220164, Length: 2040

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009052:3229775:3250666325066632527382073Shewanella baltica OS155, complete genomeTetratricopeptide TPR_2 repeat protein0664
NC_008345:3199965:3222330322233032244352106Shewanella frigidimarina NCIMB 400, complete genomeTPR repeat-containing protein2e-144513
NC_009901:3148901:3170784317078431727451962Shewanella pealeana ATCC 700345, complete genomeTetratricopeptide TPR_2 repeat protein4e-139495
NC_009092:2833865:2856557285655728586382082Shewanella loihica PV-4, complete genomeTetratricopeptide TPR_2 repeat protein3e-129462
NC_008700:2607526:2627817262781726299222106Shewanella amazonensis SB2B, complete genomeTPR domain protein2e-105384
NC_006371:1997954:2022041202204120239871947Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein2e-70267
NC_011186:819828:8264698264698283401872Vibrio fischeri MJ11 chromosome II, complete sequencetransporter2e-67257
NC_004460:1718088:1716143171614317180951953Vibrio vulnificus CMCP6 chromosome II, complete sequenceTPR repeat containing protein3e-66253
NC_006841:750000:7535157535157554221908Vibrio fischeri ES114 chromosome II, complete sequencetransporter6e-65249
NC_014966:431342:4295234295234313491827Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein4e-65249
NC_015581:1891409:1914844191484419167901947Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeTetratricopeptide TPR_1 repeat-containing protein4e-46186
NC_015733:1793399:1808783180878318105431761Pseudomonas putida S16 chromosome, complete genomeTPR domain-containing protein2e-37157
NC_013722:2784000:2800093280009328019161824Xanthomonas albilineans, complete genomeputative tpr domain protein; von willebrand factor, type a1e-30135
NC_018645:1798874:1826392182639218282121821Desulfobacula toluolica Tol2, complete genomehypothetical protein5e-26120
NC_009662:383381:3976193976193992681650Nitratiruptor sp. SB155-2, complete genomevon Willebrand factor type A domain-containing protein7e-22106
NC_008322:641197:6638376638376655581722Shewanella sp. MR-7, complete genomevon Willebrand factor, type A3e-1997.4
NC_020126:8080574:8101309810130981023671059Myxococcus stipitatus DSM 14675, complete genomeBatB protein1e-1688.6
NC_009663:2478311:248433924843392485274936Sulfurovum sp. NBC37-1, complete genomehypothetical protein9e-1479.3
NC_009663:2500186:2500186250018625017241539Sulfurovum sp. NBC37-1, complete genomevon Willebrand factor type A domain-containing protein7e-1273.2
NC_014364:394899:470228470228471202975Spirochaeta smaragdinae DSM 11293 chromosome, complete genomevon Willebrand factor type A9e-1272.8
NC_018607:1505908:154415315441531545085933Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein2e-1171.6
NC_014008:720470:7421277421277442352109Coraliomargarita akajimensis DSM 45221 chromosome, complete genomevon Willebrand factor type A2e-1171.6
NC_019908:436000:4437934437934448091017Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein8e-1169.7
NC_011901:39215:5061550615523841770Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completevon Willebrand factor A8e-1169.3
NC_014330:195447:2135292135292145451017Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein9e-1169.3
NC_020156:1220755:1230123123012312311541032Nonlabens dokdonensis DSW-6, complete genomeBatB8e-1066.2
NC_002932:2142000:2143025214302521440321008Chlorobium tepidum TLS, complete genomehypothetical protein9e-1065.9
NC_015638:1029721:1038735103873510397721038Lacinutrix sp. 5H-3-7-4 chromosome, complete genomevon Willebrand factor type A1e-0965.5
NC_020156:1220755:1228909122890912299221014Nonlabens dokdonensis DSW-6, complete genomeBatA, aerotolerance operon2e-0965.1
NC_015663:770485:7934507934507949731524Enterobacter aerogenes KCTC 2190 chromosome, complete genomeTetratricopeptide protein2e-0965.1
NC_020054:4161049:416554441655444166497954Fibrella aestuarina BUZ 2 drat genomehypothetical protein7e-0963.2
NC_015501:154590:167786167786168766981Porphyromonas asaccharolytica DSM 20707 chromosome, completevon Willebrand factor type A3e-0860.8
NC_009952:442029:446220446220447119900Dinoroseobacter shibae DFL 12, complete genomehypothetical protein9e-0859.3
NC_015638:1029721:1040316104031610413201005Lacinutrix sp. 5H-3-7-4 chromosome, complete genomevon Willebrand factor type A3e-0757.4
NC_013730:3208571:323073132307313231693963Spirosoma linguale DSM 74, complete genomevon Willebrand factor type A5e-0756.6
NC_008639:2786447:2825484282548428264971014Chlorobium phaeobacteroides DSM 266, complete genomevon Willebrand factor, type A1e-0655.8
NC_015501:154590:1687631687631697911029Porphyromonas asaccharolytica DSM 20707 chromosome, completedouble-transmembrane region domain protein2e-0655.1
NC_009663:2478311:248527124852712485906636Sulfurovum sp. NBC37-1, complete genomehypothetical protein6e-0653.1
NC_020126:8080574:8102367810236781033771011Myxococcus stipitatus DSM 14675, complete genomeBatA protein9e-0652.8