Pre_GI: BLASTP Hits

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Query: NC_004347:3028000:3039301 Shewanella oneidensis MR-1, complete genome

Start: 3039301, End: 3039783, Length: 483

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009831:2045811:2056843205684320583841542Shewanella sediminis HAW-EB3, complete genomeC4-dicarboxylate anaerobic carrier2e-61234
NC_008601:246583:2759112759112774221512Francisella tularensis subsp. novicida U112, complete genomeC4-dicarboxylate anaerobic carrier2e-31134
NC_014541:2510819:2513700251370025151571458Ferrimonas balearica DSM 9799 chromosome, complete genomeC4-dicarboxylate anaerobic carrier2e-26117
NC_012691:2614603:2683425268342526848701446Tolumonas auensis DSM 9187, complete genomeC4-dicarboxylate anaerobic carrier2e-1478.2
NC_011900:2107133:2127634212763421291451512Streptococcus pneumoniae ATCC 700669, complete genomeC4-dicarboxylate anaerobic carrier protein2e-1375.1
NC_012467:1997484:2018682201868220201931512Streptococcus pneumoniae P1031, complete genomearginine-ornithine antiporter2e-1375.1
NC_008533:1935500:1952608195260819541191512Streptococcus pneumoniae D39, complete genomehypothetical protein2e-1375.1
NC_010582:2091138:2112506211250621140171512Streptococcus pneumoniae CGSP14, complete genomehypothetical protein2e-1375.1
NC_003098:1925783:1945106194510619466171512Streptococcus pneumoniae R6, complete genomehypothetical protein2e-1375.1
NC_012466:2008000:2027031202703120285421512Streptococcus pneumoniae JJA, complete genomearginine-ornithine antiporter2e-1375.1
NC_012468:2069238:2088265208826520897761512Streptococcus pneumoniae 70585, complete genomearginine-ornithine antiporter2e-1375.1
NC_014498:2127000:2143987214398721454981512Streptococcus pneumoniae 670-6B chromosome, complete genomearginine-ornithine antiporter2e-1375.1
NC_016751:1979201:1980549198054919820361488Marinitoga piezophila KA3 chromosome, complete genomehypothetical protein4e-1373.6
NC_015389:809474:8315898315898330521464Coriobacterium glomerans PW2 chromosome, complete genomeC4-dicarboxylate anaerobic carrier3e-1270.9
NC_010673:908940:9173459173459187631419Borrelia hermsii DAH, complete genomearginine/ornithine antiporter1e-1168.9
NC_008710:900586:9140649140649154791416Borrelia turicatae 91E135, complete genomearginine/ornithine antiporter2e-1168.2
NC_013515:183088:2226022226022240561455Streptobacillus moniliformis DSM 12112, complete genomeC4-dicarboxylate anaerobic carrier2e-1167.8
NC_004461:205068:2170382170382186031566Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-1064.7
NC_009495:1516000:1535500153550015370351536Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeC4-dicarboxylate transporter3e-1064.3
NC_010718:2860096:2874496287449628758781383Natranaerobius thermophilus JW/NM-WN-LF, complete genomeC4-dicarboxylate anaerobic carrier3e-0857.4
NC_017986:2548720:2569814256981425712531440Pseudomonas putida ND6 chromosome, complete genomeC4-dicarboxylate anaerobic carrier4e-0650.4