Pre_GI: BLASTP Hits

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Query: NC_004347:1038253:1062933 Shewanella oneidensis MR-1, complete genome

Start: 1062933, End: 1063223, Length: 291

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1205258:120981712098171210125309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein7e-0649.3
NC_010995:1648897:166241216624121662711300Cellvibrio japonicus Ueda107, complete genometransposase7e-0649.3
NC_010995:404574:409605409605409904300Cellvibrio japonicus Ueda107, complete genomeIS3 family transposase, orfA7e-0649.3
NC_014121:4299500:431807643180764318354279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 orfA3e-0650.8
NC_014121:398012:409254409254409532279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase3e-0650.8
NC_014121:3627588:367247436724743672752279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 orfA4e-0650.1
NC_014121:2745097:275393727539372754215279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeISEhe3 transposase A3e-0650.8
NC_010694:2971170:299501429950142995292279Erwinia tasmaniensis, complete genometransposase (IS3 family, orf A), similar to ISPsy262e-0651.2
NC_009800:4529504:453716945371694537447279Escherichia coli HS, complete genomeISEhe3, transposase orfA4e-0650.1
NC_009800:349592:356879356879357157279Escherichia coli HS, complete genomeISEhe3, transposase orfA4e-0650.1
NC_009800:289000:296704296704296982279Escherichia coli HS, complete genomeISEhe3, transposase orfA4e-0650.1
NC_009800:2049346:205289820528982053176279Escherichia coli HS, complete genomeISEhe3, transposase orfA5e-0649.7
NC_009800:320115:328522328522328800279Escherichia coli HS, complete genomeISEhe3, transposase orfA4e-0650.1
NC_009800:2788164:280215628021562802434279Escherichia coli HS, complete genomeISEhe3, transposase orfA4e-0650.1
NC_009800:1254409:126420212642021264480279Escherichia coli HS, complete genomeISEhe3, transposase orfA4e-0650.1
NC_006512:1722138:174088117408811741159279Idiomarina loihiensis L2TR, complete genomeTransposon related ORF, HTH transcriptional regulator2e-0651.6
NC_017506:1100679:112777111277711128055285Marinobacter adhaerens HP15 chromosome, complete genometransposase IS3/IS9112e-0754.7
NC_016002:2453919:246103424610342461312279Pseudogulbenkiania sp. NH8B, complete genometransposase IS3/IS911 family protein4e-0650.1
NC_018080:5070687:508200050820005082308309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-0754.3
NC_018080:1834754:184939318493931849701309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-0754.3
NC_018080:2288700:229778022977802298088309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-0754.3
NC_018080:2288700:230736523073652307673309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-0754.3
NC_018080:4280401:429320242932024293510309Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-0754.3
NC_009656:2422083:242924624292462429554309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-0753.1
NC_009656:2512733:253924225392422539550309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-0753.1
NC_002516:2113186:211858521185852118893309Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-0651.2
NC_002516:1031386:106206110620611062369309Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-0652
NC_008463:4566976:458784145878414588149309Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible transposase4e-0753.1
NC_008463:282565:298567298567298875309Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-0753.1
NC_009434:1580205:159740015974001597678279Pseudomonas stutzeri A1501, complete genometransposase family protein9e-0752.4
NC_009434:2006500:201143120114312011709279Pseudomonas stutzeri A1501, complete genometransposase family protein9e-0752.4
NC_009434:3611738:367548236754823675760279Pseudomonas stutzeri A1501, complete genomeISxac3 transposase2e-0754.3
NC_007974:2048000:205643720564372056709273Ralstonia metallidurans CH34 chromosome 2, complete sequencetransposase IS3/IS9117e-0752.8
NC_009832:2211154:222411122241112224389279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_009832:426993:435587435587435865279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_009832:2460027:246781124678112468089279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_009832:4564752:461527246152724615550279Serratia proteamaculans 568, complete genometransposase IS3/IS911 family protein6e-0753.1
NC_009052:144619:149555149555149845291Shewanella baltica OS155, complete genometransposase IS3/IS911 family protein1e-32138
NC_009052:1211989:123465712346571234947291Shewanella baltica OS155, complete genometransposase IS3/IS911 family protein1e-32138
NC_009665:693478:719519719519719809291Shewanella baltica OS185 chromosome, complete genometransposase IS3/IS911 family protein3e-22103
NC_009997:2069894:208816620881662088456291Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein3e-32136
NC_009997:3661083:367631036763103676600291Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein9e-33138
NC_009997:726840:753809753809754099291Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein3e-22103
NC_016901:724000:750181750181750471291Shewanella baltica OS678 chromosome, complete genometransposase IS3/IS911 family protein3e-22103
NC_016901:2070121:208875320887532089043291Shewanella baltica OS678 chromosome, complete genometransposase IS3/IS911 family protein3e-32136
NC_016901:2661971:267581826758182676108291Shewanella baltica OS678 chromosome, complete genometransposase IS3/IS911 family protein9e-33138
NC_004349:3938:2113821138222971160Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod1, transposase OrfA3e-32137
NC_004347:4441110:445684844568484457138291Shewanella oneidensis MR-1, complete genomeISSod1, transposase OrfA3e-33140
NC_017328:4417000:443347344334734433757285Shigella flexneri 2002017 chromosome, complete genomeputative transposase ykgN4e-0650.1
NC_004741:2009769:201063820106382010916279Shigella flexneri 2a str. 2457T, complete genomeISEhe3 orfA4e-0650.1
NC_004741:4364235:438213043821304382408279Shigella flexneri 2a str. 2457T, complete genomeISEhe3a orf4e-0650.1
NC_004337:3590323:360688736068873607171285Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-0650.1
NC_004337:4374500:439102843910284391312285Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-0650.1
NC_008258:4345400:436170243617024361980279Shigella flexneri 5 str. 8401, complete genomeISEhe3 orfA4e-0650.1
NC_016602:173314:197675197675197953279Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetransposase A3e-0650.4