Pre_GI: BLASTP Hits

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Query: NC_004347:1038253:1050533 Shewanella oneidensis MR-1, complete genome

Start: 1050533, End: 1051084, Length: 552

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:1497746:150668615066861507231546Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,NADH dehydrogenase subunit J2e-36152
NC_015224:3191000:319860231986023199147546Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,NADH dehydrogenase subunit J2e-36151
NC_012759:2261416:227916922791692279723555Escherichia coli BW2952 chromosome, complete genomeNADH dehydrogenase subunit J3e-36151
AC_000091:2379670:240001224000122400566555Escherichia coli W3110 DNA, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit J3e-36151
NC_000913:2373984:239336423933642393918555Escherichia coli K12, complete genomeNADH dehydrogenase subunit J3e-36151
NC_010473:2465844:248512924851292485683555Escherichia coli str. K-12 substr. DH10B, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit J3e-36151
NC_010159:1861465:187234018723401872885546Yersinia pestis Angola, complete genomeNADH-quinone oxidoreductase, J subunit8e-35146
NC_004088:1801819:181135818113581811903546Yersinia pestis KIM, complete genomeNADH dehydrogenase subunit J8e-35146
NC_010465:1724000:173418617341861734731546Yersinia pseudotuberculosis YPIII, complete genomeNADH dehydrogenase (quinone)8e-35146
NC_008149:2411161:242207324220732422618546Yersinia pestis Nepal516, complete genomeNADH dehydrogenase I chain J8e-35146
NC_010634:2960000:296962229696222970167546Yersinia pseudotuberculosis PB1/+, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 68e-35146
NC_006155:3040769:305172430517243052269546Yersinia pseudotuberculosis IP 32953, complete genomeNADH dehydrogenase subunit J8e-35146
NC_003143:2849377:286025928602592860804546Yersinia pestis CO92, complete genomeNADH dehydrogenase subunit J8e-35146
NC_005810:2613456:262433826243382624883546Yersinia pestis biovar Microtus str. 91001, complete genomeNADH dehydrogenase subunit J8e-35146
NC_017265:1521276:153242515324251532970546Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,NADH:ubiquinone oxidoreductase, membrane subunit J8e-35146
NC_017168:2892000:290163229016322902177546Yersinia pestis A1122 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit J8e-35146
NC_017160:2740870:274877627487762749321546Yersinia pestis D182038 chromosome, complete genomeNADH dehydrogenase subunit J8e-35146
NC_017154:3139614:314915331491533149698546Yersinia pestis D106004 chromosome, complete genomeNADH dehydrogenase subunit J8e-35146
NC_009708:1694685:170280417028041703349546Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNADH dehydrogenase subunit J8e-35146
NC_010554:1871000:187884918788491879382534Proteus mirabilis HI4320, complete genomeNADH-quinone oxidoreductase chain J3e-30131
NC_018419:862500:871236871236871799564Secondary endosymbiont of Ctenarytaina eucalypti chromosome,NADH:ubiquinone oxidoreductase subunit 6 (chain J)1e-26119
NC_014228:2812000:282157628215762822103528Xenorhabdus nematophila ATCC 19061, complete genomeNADH dehydrogenase I chain J9e-24109
NC_005966:715591:723502723502724023522Acinetobacter sp. ADP1, complete genomeNADH dehydrogenase I chain J2e-1788.2
NC_007204:696972:705580705580706299720Psychrobacter arcticus 273-4, complete genomeprobable NADH dehydrogenase I, J subunit4e-1684.3
NC_005061:524704:537782537782538333552Candidatus Blochmannia floridanus, complete genomeNADH dehydrogenase I chain J3e-1581.3
NC_017171:825994:834668834668835189522Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeNADH dehydrogenase I subunit J8e-1579.7
NC_014259:3369000:337800133780013378522522Acinetobacter sp. DR1 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)8e-1579.7
NC_010611:797351:806025806025806546522Acinetobacter baumannii ACICU, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)8e-1579.7
NC_011595:3015895:302788830278883028406519Acinetobacter baumannii AB307-0294, complete genomeNADH-quinone oxidoreductase subunit J1e-1479.7
NC_016603:23756:324133241332931519Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeNADH dehydrogenase I subunit J1e-1479.3
NC_020075:590481:599654599654600205552Candidatus Blochmannia chromaiodes str. 640, complete genomeNADH-quinone oxidoreductase subunit J9e-1476.6
NC_004061:166375:174365174365174856492Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeNADH dehydrogenase I chain J4e-1374.3
NC_002528:148274:173672173672174184513Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeNADH dehydrogenase I chain J1e-1272.8
NC_011833:147426:173690173690174202513Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-1272.8
NC_011834:156197:173705173705174217513Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-1272.8
NC_017252:155166:173698173698174210513Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-1272.8
NC_017253:155170:173702173702174214513Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I chain J1e-1272.8
NC_017254:156215:173725173725174237513Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-1272.8
NC_017255:156195:173702173702174214513Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-1272.8
NC_017387:832000:839996839996840487492Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)1e-1272.4
NC_017162:827567:836757836757837248492Acinetobacter baumannii 1656-2 chromosome, complete genomenuoJ1e-1272.4
NC_017259:148346:165285165285165794510Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,NADH dehydrogenase I subunit J3e-1168.2
NC_013194:4305205:431777943177794318381603Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeNADH-ubiquinone/plastoquinone oxidoreductase chain 63e-0858.2
NC_007298:1029841:103793010379301038526597Dechloromonas aromatica RCB, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase, chain 61e-0756.2
NC_015731:3077842:309068230906823091287606Nitrosomonas sp. Is79A3 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 64e-0754.3
NC_017256:144854:173765173765174274510Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,NADH dehydrogenase I subunit J1e-0653.1
NC_020299:532000:540824540824541465642Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeNADH dehydrogenase I subunit J9e-0649.7