Pre_GI: BLASTP Hits

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Query: NC_004347:1038253:1050228 Shewanella oneidensis MR-1, complete genome

Start: 1050228, End: 1050536, Length: 309

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:1497746:150722815072281507530303Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,NADH dehydrogenase subunit K6e-30129
NC_015224:3191000:319830331983033198605303Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,NADH dehydrogenase subunit K6e-30129
NC_006155:3040769:305142530514253051727303Yersinia pseudotuberculosis IP 32953, complete genomeNADH dehydrogenase kappa subunit9e-30128
NC_004088:1801819:181190018119001812202303Yersinia pestis KIM, complete genomeNADH dehydrogenase kappa subunit9e-30128
NC_005810:2613456:262403926240392624341303Yersinia pestis biovar Microtus str. 91001, complete genomeNADH dehydrogenase subunit K9e-30128
NC_010465:1724000:173472817347281735030303Yersinia pseudotuberculosis YPIII, complete genomeNADH-ubiquinone oxidoreductase chain 4L9e-30128
NC_008149:2411161:242177424217742422076303Yersinia pestis Nepal516, complete genomeNADH dehydrogenase i chain k9e-30128
NC_010159:1861465:187204118720411872343303Yersinia pestis Angola, complete genomeNADH-quinone oxidoreductase, K subunit9e-30128
NC_003143:2849377:285996028599602860262303Yersinia pestis CO92, complete genomeNADH dehydrogenase kappa subunit9e-30128
NC_010634:2960000:296932329693232969625303Yersinia pseudotuberculosis PB1/+, complete genomeNADH-ubiquinone oxidoreductase chain 4L9e-30128
NC_009708:1694685:170334617033461703648303Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNADH dehydrogenase subunit K9e-30128
NC_017154:3139614:314969531496953149997303Yersinia pestis D106004 chromosome, complete genomeNADH dehydrogenase kappa subunit9e-30128
NC_017160:2740870:274931827493182749620303Yersinia pestis D182038 chromosome, complete genomeNADH dehydrogenase kappa subunit9e-30128
NC_017168:2892000:290217429021742902476303Yersinia pestis A1122 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit K9e-30128
NC_017265:1521276:153296715329671533269303Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,NADH:ubiquinone oxidoreductase, membrane subunit K9e-30128
NC_000913:2373984:239306523930652393367303Escherichia coli K12, complete genomeNADH dehydrogenase subunit K3e-27120
AC_000091:2379670:239971323997132400015303Escherichia coli W3110 DNA, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit K3e-27120
NC_010473:2465844:248483024848302485132303Escherichia coli str. K-12 substr. DH10B, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit K3e-27120
NC_012759:2261416:227887022788702279172303Escherichia coli BW2952 chromosome, complete genomeNADH dehydrogenase subunit K3e-27120
NC_010611:797351:806546806546806854309Acinetobacter baumannii ACICU, complete genomeNADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)3e-26117
NC_011595:3015895:302758030275803027888309Acinetobacter baumannii AB307-0294, complete genomeNADH-quinone oxidoreductase chain 113e-26117
NC_016603:23756:329313293133239309Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeNADH-quinone oxidoreductase chain K3e-26117
NC_017162:827567:837248837248837556309Acinetobacter baumannii 1656-2 chromosome, complete genomenuoK3e-26117
NC_017171:825994:835189835189835497309Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeNADH-quinone oxidoreductase subunit K3e-26117
NC_017387:832000:840487840487840795309Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)3e-26117
NC_005966:715591:724023724023724331309Acinetobacter sp. ADP1, complete genomeNADH dehydrogenase I chain K1e-26117
NC_014259:3369000:337769333776933378001309Acinetobacter sp. DR1 chromosome, complete genomeNADH-quinone oxidoreductase chain 114e-26116
NC_018419:862500:870937870937871239303Secondary endosymbiont of Ctenarytaina eucalypti chromosome,NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)2e-25114
NC_014228:2812000:282210328221032822405303Xenorhabdus nematophila ATCC 19061, complete genomeNADH dehydrogenase I chain K2e-25114
NC_007204:696972:706299706299706706408Psychrobacter arcticus 273-4, complete genomeNADH dehydrogenase I, K subunit6e-25112
NC_010554:1871000:187855018785501878852303Proteus mirabilis HI4320, complete genomeNADH-quinone oxidoreductase chain K4e-24110
NC_020075:590481:599355599355599657303Candidatus Blochmannia chromaiodes str. 640, complete genomeNADH-quinone oxidoreductase subunit K8e-23105
NC_017256:144854:174305174305174607303Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,NADH dehydrogenase I subunit K2e-21101
NC_011833:147426:174233174233174535303Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit K2e-1994.4
NC_011834:156197:174248174248174550303Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit K2e-1994.4
NC_017252:155166:174241174241174543303Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit K2e-1994.4
NC_017253:155170:174245174245174547303Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I chain K2e-1994.4
NC_017254:156215:174268174268174570303Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit K2e-1994.4
NC_017255:156195:174245174245174547303Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit K2e-1994.4
NC_004061:166375:174899174899175201303Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeNADH dehydrogenase I chain K2e-1994.4
NC_002528:148274:174215174215174517303Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeNADH dehydrogenase I chain K2e-1994.4
NC_009085:893601:902762902762902998237Acinetobacter baumannii ATCC 17978, complete genomeNADH dehydrogenase I chain K8e-1992.4
NC_005061:524704:537480537480537782303Candidatus Blochmannia floridanus, complete genomeNADH dehydrogenase I chain k2e-1891.3
NC_014909:540000:549317549317549607291Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeNADH-quinone oxidoreductase subunit K5e-1786.3
NC_017259:148346:165825165825166127303Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,NADH dehydrogenase I subunit K6e-1786.3
NC_015662:110950:127991127991128296306Buchnera aphidicola (Cinara tujafilina) chromosome, completeNADH dehydrogenase I subunit K3e-1167.4
NC_015222:2683056:269412226941222694427306Nitrosomonas sp. AL212 chromosome, complete genomeNAD(P)H-quinone oxidoreductase subunit 4L1e-0961.6
NC_007484:495784:512056512056512370315Nitrosococcus oceani ATCC 19707, complete genomeNADH-ubiquinone oxidoreductase, chain 4L2e-0961.2
NC_008599:128431:148318148318148626309Campylobacter fetus subsp. fetus 82-40, complete genomeNADH-quinone oxidoreductase, k subunit3e-0960.5
NC_013939:1995546:200553220055322005837306Deferribacter desulfuricans SSM1, complete genomeNADH-quinone oxidoreductase subunit K6e-0959.7
NC_014506:1803734:181527218152721815580309Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeNADH dehydrogenase subunit K8e-0958.9
NC_014315:2787089:280851528085152808829315Nitrosococcus watsoni C-113 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit 4l1e-0858.5
NC_021182:2013500:202303020230302023338309Clostridium pasteurianum BC1, complete genomeNADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)1e-0858.5
NC_011831:1969792:198358019835801983897318Chloroflexus aggregans DSM 9485, complete genomeNADH-ubiquinone oxidoreductase chain 4L2e-0857.8
NC_017033:1525132:152734515273451527650306Frateuria aurantia DSM 6220 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)2e-0857.8
NC_007517:3751107:376269937626993763001303Geobacter metallireducens GS-15, complete genomeNADH-ubiquinone oxidoreductase, chain 4L3e-0857
NC_009674:3863667:387453638745363874850315Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeNADH dehydrogenase subunit K5e-0856.2
NC_009483:4885914:489717448971744897476303Geobacter uraniireducens Rf4 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit 4L7e-0856.2
NC_015731:3077842:309032130903213090626306Nitrosomonas sp. Is79A3 chromosome, complete genomeNAD(P)H-quinone oxidoreductase subunit 4L7e-0855.8
NC_010184:5051287:506017250601725060486315Bacillus weihenstephanensis KBAB4, complete genomeNADH-ubiquinone oxidoreductase chain 4L1e-0755.5
NC_003997:5006193:502747250274725027786315Bacillus anthracis str. Ames, complete genomeNADH dehydrogenase kappa subunit1e-0755.5
NC_007530:5006319:502759850275985027912315Bacillus anthracis str. 'Ames Ancestor', complete genomeNADH dehydrogenase kappa subunit1e-0755.5
NC_005945:5011857:502880750288075029121315Bacillus anthracis str. Sterne, complete genomeNADH dehydrogenase kappa subunit1e-0755.5
NC_012581:5008749:503002850300285030342315Bacillus anthracis str. CDC 684 chromosome, complete genomeNADH dehydrogenase subunit K1e-0755.5
NC_012659:5006219:502749850274985027812315Bacillus anthracis str. A0248, complete genomeNADH dehydrogenase subunit K1e-0755.5
NC_017094:1703000:171536617153661715668303Leptospirillum ferrooxidans C2-3, complete genomeNADH dehydrogenase subunit K1e-0755.1
NC_002939:360462:377401377401377703303Geobacter sulfurreducens PCA, complete genomeNADH dehydrogenase I, K subunit2e-0754.7
NC_015499:1790186:180286418028641803166303Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNAD(P)H-quinone oxidoreductase subunit 4L2e-0754.3
NC_020299:532000:540522540522540827306Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeNADH dehydrogenase I subunit K2e-0754.3
NC_021171:4588792:462306146230614623375315Bacillus sp. 1NLA3E, complete genomeNADH:ubiquinone oxidoreductase subunit K2e-0754.3
NC_015672:203139:218930218930219229300Flexistipes sinusarabici DSM 4947 chromosome, complete genomeNAD(P)H-quinone oxidoreductase subunit 4L2e-0754.3
NC_011979:537862:546509546509546811303Geobacter sp. FRC-32, complete genomeNADH-ubiquinone oxidoreductase chain 4L3e-0753.9
NC_004722:5194000:520556352055635205877315Bacillus cereus ATCC 14579, complete genomeNADH dehydrogenase kappa subunit4e-0753.5
NC_013512:126915:137380137380137682303Sulfurospirillum deleyianum DSM 6946, complete genomeNADH-ubiquinone oxidoreductase chain 4L4e-0753.5
NC_006274:5085860:509671150967115097025315Bacillus cereus E33L, complete genomeNADH dehydrogenase kappa subunit3e-0753.5
NC_011969:4993386:500491250049125005226315Bacillus cereus Q1 chromosome, complete genomeNADH dehydrogenase subunit k3e-0753.5
NC_014335:4969549:498039949803994980713315Bacillus cereus biovar anthracis str. CI chromosome, completeNADH dehydrogenase kappa subunit5e-0753.1
NC_012472:5055184:506618650661865066500315Bacillus cereus 03BB102, complete genomeNADH dehydrogenase (ubiquinone), K subunit5e-0753.1
NC_003909:4996783:500562650056265005940315Bacillus cereus ATCC 10987, complete genomeNADH dehydrogenase kappa subunit5e-0753.1
NC_016779:5009320:502032250203225020636315Bacillus cereus F837/76 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit K5e-0753.1
NC_008344:950241:958028958028958333306Nitrosomonas eutropha C91, complete genomeNADH-ubiquinone oxidoreductase, chain 4L5e-0753.1
NC_011772:5158680:516736251673625167676315Bacillus cereus G9842, complete genomeNADH dehydrogenase (ubiquinone), K subunit5e-0753.1
NC_011725:5201995:521351152135115213825315Bacillus cereus B4264 chromosome, complete genomeNADH dehydrogenase subunit K5e-0753.1
NC_014171:5107956:511774151177415118055315Bacillus thuringiensis BMB171 chromosome, complete genomeNADH dehydrogenase subunit K5e-0753.1
NC_017208:5273500:528110552811055281419315Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeNADH dehydrogenase subunit K5e-0753.1
NC_011658:5049349:506087450608745061188315Bacillus cereus AH187 chromosome, complete genomeNADH dehydrogenase subunit K8e-0752.4
NC_014973:5099543:513135151313515131653303Geobacter sp. M18 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain 4L1e-0652
NC_012039:1365576:137774913777491378063315Campylobacter lari RM2100, complete genomeNADH-quinone oxidoreductase, K subunit1e-0652
NC_005042:165530:179861179861180187327Prochlorococcus marinus subsp. marinus str. CCMP1375, completeNADH dehydrogenase kappa subunit1e-0652
NC_013861:311908:320974320974321279306Legionella longbeachae NSW150, complete genomeNADH-quinone oxidoreductase chain K1e-0651.6
NC_015318:219484:234728234728235024297Hippea maritima DSM 10411 chromosome, complete genomeNAD(P)H-quinone oxidoreductase subunit 4L2e-0651.6
NC_005861:695130:702434702434702733300Candidatus Protochlamydia amoebophila UWE25, complete genomeputative NADH-ubiquinone oxidoreductase chain K2e-0651.2
NC_014166:2983564:299461529946152994914300Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit 4L2e-0651.2
NC_014758:310394:329160329160329459300Calditerrivibrio nitroreducens DSM 19672 chromosome, completeNADH dehydrogenase subunit k2e-0650.8
NC_016510:4343:207152071521053339Flavobacterium columnare ATCC 49512 chromosome, complete genomeNADH dehydrogenase I, K subunit3e-0650.4
NC_009883:1429000:145021414502141450537324Rickettsia bellii OSU 85-389, complete genomeNADH dehydrogenase subunit K5e-0650.1
NC_010814:3332088:334938133493813349683303Geobacter lovleyi SZ, complete genomeNADH-ubiquinone oxidoreductase chain 4L4e-0650.1
NC_013194:4305205:431738643173864317691306Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeNADH-ubiquinone oxidoreductase chain 4L4e-0650.1
NC_007205:841818:858166858166858477312Candidatus Pelagibacter ubique HTCC1062, complete genomeNADH Dehydrogenase I Chain K6e-0649.7
NC_010117:1461502:147262814726281472933306Coxiella burnetii RSA 331, complete genomeNADH dehydrogenase (ubiquinone), K subunit8e-0649.3
NC_011528:535680:541548541548541853306Coxiella burnetii CbuK_Q154, complete genomeNADH-quinone oxidoreductase chain K8e-0649.3
NC_002971:1379567:139204713920471392352306Coxiella burnetii RSA 493, complete genomeNADH dehydrogenase I, K subunit8e-0649.3
NC_011527:525759:534932534932535237306Coxiella burnetii CbuG_Q212, complete genomeNADH-quinone oxidoreductase chain K8e-0649.3
NC_007298:1029841:103854110385411038852312Dechloromonas aromatica RCB, complete genomeNADH dehydrogenase kappa subunit6e-0649.3
NC_010475:953618:955335955335955646312Synechococcus sp. PCC 7002, complete genomeNADH dehydrogenase subunit E8e-0648.9
NC_008702:1514707:153412815341281534433306Azoarcus sp. BH72, complete genomeputative NADH-ubiquinone oxidoreductase, chain K9e-0648.9
NC_017280:1467252:147684114768411477137297Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeNADH dehydrogenase I subunit K1e-0548.9
NC_017279:1489397:149847514984751498771297Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeNADH dehydrogenase I subunit K1e-0548.9
NC_009707:1685381:169729016972901697586297Campylobacter jejuni subsp. doylei 269.97 chromosome, completeNADH-quinone oxidoreductase subunit K1e-0548.9