Pre_GI: BLASTP Hits

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Query: NC_004347:1038253:1042150 Shewanella oneidensis MR-1, complete genome

Start: 1042150, End: 1043730, Length: 1581

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:242760:2653402653402669291590Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein0667
NC_012580:207025:2303922303922319811590Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein0667
NC_002506:207097:2304652304652320541590Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein0667
NC_016945:207089:2304452304452320251581Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein0667
NC_016446:979884:1003240100324010048201581Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein0667
NC_008345:3287000:3301054330105433026101557Shewanella frigidimarina NCIMB 400, complete genomeNa+/H+ antiporter NhaC2e-140499
NC_008309:842072:8438158438158453621548Haemophilus somnus 129PT, complete genomeNa(+)/H(+) antiporter3e-112405
NC_010519:1411347:1413975141397514155221548Haemophilus somnus 2336 chromosome, complete genomehypothetical protein4e-112405
NC_014218:1163513:1163513116351311650991587Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeNa+/H+ antiporter NhaC9e-66251
NC_014150:1607873:1612066161206616137181653Brachyspira murdochii DSM 12563 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein2e-55216
NC_017361:930280:9321039321039335931491Helicobacter pylori SouthAfrica7 chromosome, complete genomehypothetical protein4e-53209
NC_013204:74855:9368593685953431659Eggerthella lenta DSM 2243, complete genomeNa+/H+ antiporter NhaC8e-49195
NC_007963:3574000:3577282357728235788351554Chromohalobacter salexigens DSM 3043, complete genomeNa+/H+ antiporter NhaC1e-48194
NC_014654:2277461:2295226229522622966561431Halanaerobium sp. 'sapolanicus' chromosome, complete genomeNa+/H+ antiporter NhaC-like protein6e-47189
NC_015865:1468689:1497778149777814993011524Thermococcus sp. 4557 chromosome, complete genomeNhaC-type sodium/hydrogen antiporter8e-47188
NC_014166:2055984:2077667207766720793821716Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeNa+/H+ antiporter NhaC5e-44179
NC_007963:1582089:1611475161147516129891515Chromohalobacter salexigens DSM 3043, complete genomeNa+/H+ antiporter NhaC4e-43176
NC_013456:3011518:3017418301741830189411524Vibrio sp. Ex25 chromosome 1, complete genomeNa+/H+ antiporter NhaC5e-43176
NC_013501:1881692:1908675190867519105641890Rhodothermus marinus DSM 4252, complete genomeNa+/H+ antiporter NhaC9e-43175
NC_000868:269923:2931072931072947081602Pyrococcus abyssi GE5, complete genomehypothetical protein3e-42173
NC_011529:1375920:1392845139284513945031659Thermococcus onnurineus NA1, complete genomeNhaC-type sodium/hydrogen antiporter7e-42172
NC_016901:2542110:2559986255998625613681383Shewanella baltica OS678 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein5e-39162
NC_009997:2585588:2600069260006926014511383Shewanella baltica OS195, complete genomeNa+/H+ antiporter NhaC5e-39162
NC_012029:1759291:1760593176059317622781686Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeNa+/H+ antiporter NhaC8e-39162
NC_012658:482313:5055145055145072801767Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNa+/H+ antiporter family protein3e-38160
NC_012563:519037:5423715423715441371767Clostridium botulinum A2 str. Kyoto, complete genomeNa+/H+ antiporter family protein3e-38160
NC_013922:1201456:1204912120491212066061695Natrialba magadii ATCC 43099 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein5e-38159
NC_013744:300000:3176743176743194581785Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeNa+/H+ antiporter NhaC-like protein2e-37157
NC_012883:1421644:1422182142218214238641683Thermococcus sibiricus MM 739, complete genomeNa+/H+ antiporter, putative, NhaC family4e-37156
NC_010520:496500:5175405175405193061767Clostridium botulinum A3 str. Loch Maree, complete genomeNa+/H+ antiporter family protein8e-37155
NC_009439:4267356:4271694427169442730731380Pseudomonas mendocina ymp, complete genomeNa+/H+ antiporter NhaC9e-37155
NC_009697:444801:4677824677824695481767Clostridium botulinum A str. ATCC 19397 chromosome, completeNa+/H+ antiporter family protein4e-36153
NC_009698:467500:4881704881704899361767Clostridium botulinum A str. Hall chromosome, complete genomeNa+/H+ antiporter family protein4e-36153
NC_009699:490652:5141585141585159241767Clostridium botulinum F str. Langeland chromosome, complete genomeNa+/H+ antiporter family protein2e-36153
NC_017297:490922:5144275144275161931767Clostridium botulinum F str. 230613 chromosome, complete genomeNa+/H+ antiporter family protein2e-36153
NC_010516:514000:5344675344675362331767Clostridium botulinum B1 str. Okra, complete genomeNa+/H+ antiporter family protein5e-36152
NC_004603:1897532:1897532189753218990161485Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein9e-36151
NC_021066:3703725:3714412371441237158301419Raoultella ornithinolytica B6, complete genomeNa+/H+ antiporter NhaC-like protein2e-29130
NC_014378:525717:5275905275905290981509Acetohalobium arabaticum DSM 5501 chromosome, complete genometransporter, NhaC family (TC 2.A.35)5e-26119
NC_013165:1407000:1442760144276014442021443Slackia heliotrinireducens DSM 20476, complete genomeNa+/H+ antiporter7e-25115
NC_013204:929434:9532219532219545551335Eggerthella lenta DSM 2243, complete genomeNa+/H+ antiporter NhaC1e-0758.2