Pre_GI: BLASTP Hits

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Query: NC_004337:3621985:3636289 Shigella flexneri 2a str. 301, complete genome

Start: 3636289, End: 3637193, Length: 905

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:3887997:3904374390437439055311158Escherichia coli SE11 chromosome, complete genomemultidrug efflux system protein MdtE1e-174612
CU928160:3709081:3723217372321737243741158Escherichia coli IAI1 chromosome, complete genomemultidrug resistance efflux transporter2e-174611
NC_007384:3741708:3744846374484637460031158Shigella sonnei Ss046, complete genomehypothetical protein2e-174611
NC_010473:3722571:3755000375500037561571158Escherichia coli str. K-12 substr. DH10B, complete genomemultidrug resistance efflux transporter2e-174611
NC_010468:231000:2342662342662354231158Escherichia coli ATCC 8739, complete genomeefflux transporter, RND family, MFP subunit2e-174611
NC_009800:3685651:3700543370054337017001158Escherichia coli HS, complete genomemultidrug resistance protein MdtE2e-174611
NC_009801:3956917:3971043397104339722001158Escherichia coli E24377A, complete genomemultidrug resistance protein MdtE2e-174611
NC_000913:3624826:3657255365725536584121158Escherichia coli K12, complete genomemultidrug resistance efflux transporter2e-174611
NC_007613:3470314:3504798350479835059551158Shigella boydii Sb227, complete genomehypothetical protein2e-174611
CU928145:3983432:4024340402434040254971158Escherichia coli 55989 chromosome, complete genomemultidrug resistance efflux transporter2e-174611
AC_000091:3976888:3980026398002639811831158Escherichia coli W3110 DNA, complete genomemultidrug resistance efflux transporter2e-174611
NC_011748:3983432:4024340402434040254971158Escherichia coli 55989, complete genomemultidrug efflux system protein MdtE2e-174611
NC_016902:246767:2499052499052510621158Escherichia coli KO11FL chromosome, complete genomeRND family efflux transporter MFP subunit2e-174611
NC_013364:4306000:4318721431872143198781158Escherichia coli O111:H- str. 11128, complete genomemultidrug resistance efflux transporter MdtE2e-174611
NC_013361:4566779:4580001458000145811581158Escherichia coli O26:H11 str. 11368 chromosome, complete genomemultidrug efflux system protein MdtE2e-174611
NC_012967:3549880:3588723358872335898801158Escherichia coli B str. REL606 chromosome, complete genomemultidrug efflux system protein MdtE2e-174611
NC_012947:248000:2512962512962524531158Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemultidrug efflux system protein MdtE2e-174611
NC_012759:3529657:3545749354574935469061158Escherichia coli BW2952 chromosome, complete genomemultidrug efflux system protein MdtE2e-174611
NC_011741:3709081:3723217372321737243741158Escherichia coli IAI1 chromosome, complete genomemultidrug efflux system protein MdtE2e-174611
CP002185:3822470:3855011385501138561681158Escherichia coli W, complete genomemultidrug resistance efflux transporter2e-174611
CP002516:246767:2499052499052510621158Escherichia coli KO11, complete genomeefflux transporter, RND family, MFP subunit2e-174611
NC_013353:4313462:4326442432644243275991158Escherichia coli O103:H2 str. 12009, complete genomemultidrug resistance efflux transporter MdtE4e-174610
AP010958:4313462:4326442432644243275991158Escherichia coli O103:H2 str. 12009 DNA, complete genomemultidrug resistance efflux transporter MdtE4e-174610
NC_016822:3946500:3963270396327039644271158Shigella sonnei 53G, complete genomemultidrug efflux system protein MdtE8e-174609
NC_008258:3581583:359655035965503597467918Shigella flexneri 5 str. 8401, complete genome6e-174609
NC_017328:3655876:367114536711453672062918Shigella flexneri 2002017 chromosome, complete genomeMultidrug resistance protein mdtE precursor6e-174609
NC_004337:3590323:363628936362893637193905Shigella flexneri 2a str. 301, complete genome1e-173608
NC_004741:4132056:413664841366484137559912Shigella flexneri 2a str. 2457T, complete genome1e-173608
NC_010658:3622610:3637035363703536381921158Shigella boydii CDC 3083-94, complete genomemultidrug resistance protein MdtE1e-173608
NC_015566:1127595:1159707115970711608941188Serratia sp. AS12 chromosome, complete genomeRND family efflux transporter MFP subunit6e-88323
NC_015567:1127780:1159892115989211610791188Serratia sp. AS9 chromosome, complete genomeRND family efflux transporter MFP subunit6e-88323
NC_010067:4149298:4161654416165441628111158Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-75281
NC_006511:3364448:3367626336762633687831158Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtransmembrane protein affecting septum formation and cell membrane permeability2e-74279
NC_015424:3112637:3151475315147531526681194Aeromonas veronii B565 chromosome, complete genomeAcriflavin resistance protein A3e-70265
NC_008570:3220539:3273334327333432745271194Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeacriflavin resistance protein A4e-70265
NC_011666:1572487:1575648157564815768591212Methylocella silvestris BL2, complete genomeefflux transporter, RND family, MFP subunit8e-68257
NC_013859:9500:1033710337115391203Azospirillum sp. B510 plasmid pAB510e, complete sequenceefflux transporter6e-67254
NC_013456:2528284:2528284252828425294231140Vibrio sp. Ex25 chromosome 1, complete genomemembrane fusion protein of RND family multidrug efflux pump3e-66251
NC_011296:1542835:1549918154991815510631146Thermodesulfovibrio yellowstonii DSM 11347, complete genomeacriflavine resistance protein A2e-65249
NC_010814:3673983:3693290369329036944891200Geobacter lovleyi SZ, complete genomeefflux transporter, RND family, MFP subunit5e-65248
NC_007509:71954:1050031050031062591257Burkholderia sp. 383 chromosome 3, complete sequenceSecretion protein, HlyD family2e-64246
NC_016002:2453919:2472106247210624732901185Pseudogulbenkiania sp. NH8B, complete genomecation/multidrug efflux system, membrane-fusion protein AcrA3e-64245
NC_013592:3212834:3237427323742732385961170Dickeya dadantii Ech586, complete genomeefflux transporter, RND family, MFP subunit1e-63243
NC_014931:1642179:1666374166637416676001227Variovorax paradoxus EPS chromosome, complete genomeefflux transporter, RND family, MFP subunit2e-62239
NC_017075:1674758:1698680169868016998701191Rubrivivax gelatinosus IL144, complete genomemultidrug resistance protein MexA6e-62237
NC_009512:3251545:3254778325477832559831206Pseudomonas putida F1, complete genomeefflux transporter, RND family, MFP subunit4e-60231
NC_015379:2482901:2492232249223224933801149Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,acriflavine resistance protein A8e-60230
NC_007005:3414579:3440050344005034412521203Pseudomonas syringae pv. syringae B728a, complete genomeSecretion protein HlyD1e-57223
NC_007761:3564449:3584663358466335858741212Rhizobium etli CFN 42, complete genomeprobable protein secretion protein, HlyD family5e-55214
NC_008752:415599:4187824187824200861305Acidovorax avenae subsp. citrulli AAC00-1, complete genomeefflux transporter, RND family, MFP subunit2e-54213
NC_012660:4558122:4561259456125945624431185Pseudomonas fluorescens SBW25 chromosome, complete genomeputative acriflavine resistance protein A3e-54212
NC_010994:3666651:3686151368615136873621212Rhizobium etli CIAT 652, complete genomeprobable protein secretion protein, HlyD family1e-53210
NC_010002:528529:5317005317005329921293Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit9e-53207
NC_007492:3332839:3332839333283933339961158Pseudomonas fluorescens PfO-1, complete genomeSecretion protein HlyD9e-53207
NC_014758:579741:5960655960655972911227Calditerrivibrio nitroreducens DSM 19672 chromosome, completeefflux transporter, rnd family, mfp subunit1e-52206
NC_007492:3180480:3183639318363931847961158Pseudomonas fluorescens PfO-1, complete genomeSecretion protein HlyD6e-52204
NC_010338:1394550:1415350141535014165071158Caulobacter sp. K31, complete genomeefflux transporter, RND family, MFP subunit3e-51202
NC_003304:2507000:2520934252093425221361203Agrobacterium tumefaciens str. C58 chromosome circular, completeacriflavin resistance protein A3e-51202
NC_003062:2506959:2520791252079125220231233Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein3e-51202
NC_015183:2483653:2500945250094525021471203Agrobacterium sp. H13-3 chromosome, complete genomeacriflavin resistance protein A1e-50200
NC_008380:4078670:4098266409826640994771212Rhizobium leguminosarum bv. viciae 3841, complete genomeputative RND family transporter2e-50199
NC_012850:3454270:3473334347333434745451212Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeefflux transporter, RND family, MFP subunit2e-50199
NC_012808:2886282:2891351289135128925201170Methylobacterium extorquens AM1, complete genomemultidrug efflux system3e-49195
NC_012997:4491871:4492651449265144938201170Teredinibacter turnerae T7901, complete genomeefflux transporter, RND family, MFP subunit1e-48193
NC_004547:3866439:3869665386966538708371173Erwinia carotovora subsp. atroseptica SCRI1043, complete genomemultidrug resistance protein4e-47188
NC_010725:3917369:3928206392820639294021197Methylobacterium populi BJ001, complete genomeefflux transporter, RND family, MFP subunit4e-47188
NC_011894:3090000:3101741310174131028951155Methylobacterium nodulans ORS 2060, complete genomeefflux transporter, RND family, MFP subunit2e-45182
NC_013592:1465015:1483035148303514842971263Dickeya dadantii Ech586, complete genomeefflux transporter, RND family, MFP subunit9e-43174
NC_014910:465980:4706244706244719041281Alicycliphilus denitrificans BC chromosome, complete genomeefflux transporter, rnd family, mfp subunit9e-43174
NC_011988:1036618:1039797103979710410321236Agrobacterium vitis S4 chromosome 2, complete genomeacriflavin resistance protein A2e-42173
NC_018691:1293449:1308298130829813094581161Alcanivorax dieselolei B5 chromosome, complete genomeMultidrug efflux system transport protein1e-41170
NC_007508:2756945:2759759275975927608711113Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomemembrane fusion protein4e-41168
NC_009654:1123709:1129680112968011308341155Marinomonas sp. MWYL1, complete genomeRND family efflux transporter MFP subunit2e-40166
NC_019907:1060005:1072860107286010740351176Liberibacter crescens BT-1 chromosome, complete genomeprotein secretion protein, HlyD family3e-39162
NC_007947:1703326:1707894170789417090961203Methylobacillus flagellatus KT, complete genomesecretion protein HlyD2e-38159
NC_012988:1459961:1504960150496015059701011Methylobacterium extorquens DM4, complete genomeRND efflux transporter, membrane fusion protein subunit1e-37157
NC_009439:918534:9381149381149392651152Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit2e-37156
NC_015138:3022414:3025600302560030267811182Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRND family efflux transporter MFP subunit9e-36150
NC_015222:3137167:3152336315233631535771242Nitrosomonas sp. AL212 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-34146
NC_010334:2615260:2615260261526026164861227Shewanella halifaxensis HAW-EB4, complete genomeefflux transporter, RND family, MFP subunit3e-33142
NC_015856:3059737:3073516307351630748411326Collimonas fungivorans Ter331 chromosome, complete genomecation/multidrug efflux system, mebrane-fusion component2e-32140
NC_009615:1734752:1745356174535617465221167Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacriflavine resistance protein A2e-32140
NC_009715:167513:1836061836061847451140Campylobacter curvus 525.92 chromosome, complete genomeCmeA3e-32139
NC_007973:1821753:1841878184187818431161239Ralstonia metallidurans CH34 chromosome 1, complete sequencesecretion protein HlyD2e-32139
NC_012660:3179980:3198358319835831995991242Pseudomonas fluorescens SBW25 chromosome, complete genomeHlyD family secretion protein1e-31137
NC_016616:2112211:2141088214108821422751188Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit2e-31136
NC_010002:5691968:5695306569530656965891284Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit2e-31136
NC_017060:59500:5967859678609011224Rahnella aquatilis HX2 plasmid PRA1, complete sequenceRND family efflux transporter MFP subunit7e-31134
NC_015062:58826:5953959539607621224Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceefflux transporter, RND family, MFP subunit7e-31134
NC_008027:2397255:2404188240418824054291242Pseudomonas entomophila L48, complete genomemultidrug efflux RND membrane fusion protein MexE1e-30133
NC_014217:4597426:4613179461317946144351257Starkeya novella DSM 506 chromosome, complete genomeefflux transporter, RND family, MFP subunit6e-30131
NC_011283:1178500:1178513117851311796881176Klebsiella pneumoniae 342 chromosome, complete genomeRND multidrug efflux membrane fusion protein OqxA7e-30131
NC_015388:1612000:1615403161540316165841182Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeefflux transporter, RND family, MFP subunit8e-30130
NC_007484:1229899:1231994123199412331001107Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD2e-29129
NC_013960:1778411:1785343178534317864701128Nitrosococcus halophilus Nc4 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-29128
NC_014313:2059933:2081657208165720827691113Hyphomicrobium denitrificans ATCC 51888 chromosome, completeefflux transporter, RND family, MFP subunit6e-29128
NC_011992:1213726:1212422121242212137291308Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit1e-28127
NC_008750:1253354:1278712127871212800221311Shewanella sp. W3-18-1, complete genomeefflux transporter, RND family, MFP subunit2e-28126
NC_017075:1:1796617966191591194Rubrivivax gelatinosus IL144, complete genomesecretion protein HlyD family protein5e-27121
NC_021066:5342127:5345303534530353464781176Raoultella ornithinolytica B6, complete genomeRND family efflux transporter MFP subunit2e-26119
NC_012489:3503632:3523342352334235244841143Gemmatimonas aurantiaca T-27, complete genomemultidrug resistance protein7e-26117
NC_007951:1711223:1717679171767917189801302Burkholderia xenovorans LB400 chromosome 1, complete sequenceRND efflux pump, membrane fusion protein, CzcB subfamily5e-25115
NC_012808:921985:9435119435119446291119Methylobacterium extorquens AM1, complete genomeputative RND efflux transporter, membrane fusion protein subunit4e-25115
NC_010505:5077162:5108875510887551100531179Methylobacterium radiotolerans JCM 2831, complete genomeefflux transporter, RND family, MFP subunit3e-25115
NC_016832:799764:8304028304028316431242Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Multidrug resistance protein mdtA1e-24114
NC_012125:1632150:1665216166521616664571242Salmonella enterica subsp. enterica serovar Paratyphi C strainmultidrug efflux system subunit MdtA1e-24114
NC_004631:799810:8304488304488316891242Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative efflux system protein1e-24114
NC_014933:979063:9851959851959862981104Bacteroides helcogenes P 36-108 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-24114
NC_015663:4950000:5015599501559950167951197Enterobacter aerogenes KCTC 2190 chromosome, complete genomemultidrug efflux system subunit MdtA5e-24112
NC_015968:3023048:3038853303885330401001248Enterobacter asburiae LF7a chromosome, complete genomeMultidrug resistance protein mdtA4e-24112
NC_014029:3171627:3200515320051532018491335Yersinia pestis Z176003 chromosome, complete genomeHlyD family secretion protein3e-24112
NC_014618:1700784:1724154172415417255331380Enterobacter cloacae SCF1 chromosome, complete genomeRND family efflux transporter MFP subunit3e-24112
NC_011146:63912:7806978069792021134Geobacter bemidjiensis Bem, complete genomeefflux transporter, RND family, MFP subunit6e-24111
NC_004556:1611973:1629879162987916311141236Xylella fastidiosa Temecula1, complete genomemembrane fusion protein precursor8e-24111
NC_012988:5516872:5516872551687255180141143Methylobacterium extorquens DM4, complete genomeRND efflux transporter, membrane fusion protein subunit1e-23110
NC_017192:1063955:1083429108342910844871059Arcobacter sp. L, complete genomemultidrug efflux RND membrane fusion protein1e-23110
NC_014121:3453815:3469645346964534708471203Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completemultidrug efflux system subunit MdtA9e-24110
NC_015761:299386:3531313531313543691239Salmonella bongori NCTC 12419, complete genomecation transport poprotein9e-24110
NC_017187:750363:7673707673707684281059Arcobacter butzleri ED-1, complete genomemultidrug efflux RND membrane fusion protein3e-23109
NC_010513:1590758:1613323161332316145581236Xylella fastidiosa M12 chromosome, complete genomemembrane fusion protein2e-23109
NC_014618:2139639:2142716214271621438431128Enterobacter cloacae SCF1 chromosome, complete genomeRND family efflux transporter MFP subunit2e-23109
NC_011894:585637:6008646008646020091146Methylobacterium nodulans ORS 2060, complete genomeefflux transporter, RND family, MFP subunit2e-23109
NC_010170:4739925:4765157476515747663501194Bordetella petrii, complete genomeHlyD family secretion protein1e-22107
NC_015160:2664613:2672299267229926734561158Odoribacter splanchnicus DSM 20712 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-22107
NC_008786:2573558:2590816259081625920871272Verminephrobacter eiseniae EF01-2, complete genomeefflux transporter, RND family, MFP subunit2e-22106
NC_004663:2437760:2469908246990824710501143Bacteroides thetaiotaomicron VPI-5482, complete genomemultidrug efflux protein3e-22106
NC_016776:3973428:3988392398839239895071116Bacteroides fragilis 638R, complete genomeputative transport-related, exported protein3e-22105
NC_003228:3934770:3949738394973839508531116Bacteroides fragilis NCTC 9343, complete genomeputative transport-related, exported protein3e-22105
NC_015682:205900:2138512138512149631113Thermodesulfobacterium sp. OPB45 chromosome, complete genomeRND family efflux transporter MFP subunit1e-21104
NC_015160:2664613:2675080267508026762101131Odoribacter splanchnicus DSM 20712 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-21102
NC_002488:2235883:2255906225590622571411236Xylella fastidiosa 9a5c, complete genomemembrane fusion protein precursor5e-21102
NC_013856:692000:7154747154747166371164Azospirillum sp. B510 plasmid pAB510b, complete sequenceefflux transporter RND family, MFP subunit5e-21101
NC_010725:5491491:5494730549473054960551326Methylobacterium populi BJ001, complete genomeefflux transporter, RND family, MFP subunit8e-21101
NC_016818:859181:8830048830048843471344Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit3e-2099.4
NC_004663:3680974:3697897369789736990001104Bacteroides thetaiotaomicron VPI-5482, complete genomemultidrug resistance protein3e-2099.4
NC_012125:373630:3917063917063929111206Salmonella enterica subsp. enterica serovar Paratyphi C straincation efflux pump1e-1997.4
NC_011274:376970:3950453950453962711227Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cation efflux pump2e-1996.7
NC_016831:2627515:2626292262629226275181227Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative cation efflux pump2e-1996.7
NC_011144:1073944:1077140107714010782371098Phenylobacterium zucineum HLK1, complete genomemultidrug-efflux system secretion protein, HlyD family2e-1996.7
NC_011149:361765:3798543798543810801227Salmonella enterica subsp. enterica serovar Agona str. SL483,putative auxiliary transport protein, membrane fusion protein (MFP) family2e-1996.3
NC_011080:383441:4015174015174027431227Salmonella enterica subsp. enterica serovar Newport str. SL254,putative auxiliary transport protein, membrane fusion protein (MFP) family3e-1996.3
NC_010102:2721374:2720151272015127213771227Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1996.3
NC_011083:403022:4441844441844454101227Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative auxiliary transport protein, membrane fusion protein (MFP) family3e-1995.9
NC_009720:813157:8212248212248223871164Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit4e-1995.5
NC_013892:2689645:2708078270807827093191242Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-1995.1
NC_015057:241103:2600532600532613811329Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequenceefflux transporter, RND family, MFP subunit1e-1893.6
NC_015723:384000:4065804065804078181239Cupriavidus necator N-1 chromosome 2, complete sequenceefflux pump periplasmic linker BepF3e-1789.4
NC_012808:3897751:391679639167963917245450Methylobacterium extorquens AM1, complete genomehypothetical protein7e-1788.2
NC_015499:1167932:1167932116793211690381107Thermodesulfobium narugense DSM 14796 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-1687.4
NC_013037:5587802:5607045560704556081961152Dyadobacter fermentans DSM 18053, complete genomeefflux transporter, RND family, MFP subunit1e-1687.4
NC_012559:1228280:1245724124572412469111188Laribacter hongkongensis HLHK9, complete genomeprobable membrane protein2e-1686.7
NC_009615:4031335:4031335403133540324381104Parabacteroides distasonis ATCC 8503 chromosome, complete genomemembrane fusion protein2e-1686.3
NC_009615:2039964:2057024205702420581391116Parabacteroides distasonis ATCC 8503 chromosome, complete genomecation efflux pump1e-1584.3
NC_005966:3334864:3338035333803533393331299Acinetobacter sp. ADP1, complete genomemembrane protein inolved in drug resistance2e-1583.6
NC_006347:4031000:404598140459814046895915Bacteroides fragilis YCH46, complete genomemultidrug efflux protein4e-1582.4
NC_011206:1719000:1737577173757717386741098Acidithiobacillus ferrooxidans ATCC 53993, complete genomeefflux transporter, RND family, MFP subunit6e-1581.6
NC_011761:1838000:1853988185398818550821095Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRND family efflux transporter MFP subunit6e-1581.6
NC_015186:132567:1325671325671337511185Acidiphilium multivorum AIU301, complete genomeHlyD family secretion protein2e-1376.6
NC_009484:98250:1013221013221025061185Acidiphilium cryptum JF-5 chromosome, complete genomeRND family efflux transporter MFP subunit2e-1376.6
NC_014120:88679:1059771059771071281152Burkholderia sp. CCGE1002 plasmid pBC201, complete sequenceefflux transporter, RND family, MFP subunit3e-1376.3
NC_016818:1795576:1840047184004718411381092Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit3e-1375.9
NC_015376:662844:6643396643396656881350Burkholderia gladioli BSR3 chromosome chromosome 2, completesecretion protein HlyD7e-1374.7
NC_015565:431273:4348684348684359981131Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeRND family efflux transporter MFP subunit1e-1274.3
NC_009614:2431005:2434060243406024351361077Bacteroides vulgatus ATCC 8482 chromosome, complete genomemembrane fusion protein1e-1274.3
NC_002977:2407392:2419226241922624203141089Methylococcus capsulatus str. Bath, complete genomeefflux transporter, RND family, MFP subunit2e-1273.6
NC_011770:2804218:282281528228152823417603Pseudomonas aeruginosa LESB58, complete genomeefflux transporter, RND family, MFP subunit2e-1273.6
NC_012796:3374911:3374911337491133760411131Desulfovibrio magneticus RS-1, complete genomeputative efflux system protein3e-1272.4
NC_010337:1561430:1590063159006315912831221Heliobacterium modesticaldum Ice1, complete genomehlyd family secretion protein6e-1271.6
NC_010939:2085000:2093467209346720946211155Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeprobable macrolide-specific efflux protein7e-1271.2
NC_011365:1053178:1067478106747810685481071Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRND family efflux transporter MFP subunit8e-1271.2
NC_010278:1989500:1997995199799519991581164Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein9e-1271.2
NC_009659:1984980:2002257200225720038371581Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium resistance protein CzcB1e-1170.5
NC_021172:3655206:3658378365837836595921215Hyphomicrobium denitrificans 1NES1, complete genomeRND family efflux transporter MFP subunit2e-1170.1
NC_010125:148500:1538341538341548531020Gluconacetobacter diazotrophicus PAl 5, complete genomeputative secretion protein, HlyD-family2e-1169.7
NC_008347:2515921:2549944254994425513231380Maricaulis maris MCS10, complete genomeefflux transporter, RND family, MFP subunit3e-1169.7
NC_015376:345347:3453473453473466001254Burkholderia gladioli BSR3 chromosome chromosome 2, completeefflux transporter, RND family, MFP subunit3e-1169.3
NC_009053:2025782:203653420365342037310777Actinobacillus pleuropneumoniae L20, complete genomeprobable macrolide-specific efflux protein4e-1168.9
NC_020211:996497:1017106101710610182271122Serratia marcescens WW4, complete genomeRND family efflux transporter MFP subunit4e-1168.9
NC_013501:990022:9939139939139951061194Rhodothermus marinus DSM 4252, complete genomeefflux transporter, RND family, MFP subunit4e-1168.9
NC_011901:342777:360099360099360914816Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completesecretion protein HlyD family protein5e-1168.6
NC_010505:1581429:1605830160583016071011272Methylobacterium radiotolerans JCM 2831, complete genomeefflux transporter, RND family, MFP subunit6e-1168.6
NC_013960:1693643:1710722171072217120141293Nitrosococcus halophilus Nc4 chromosome, complete genomeefflux transporter, RND family, MFP subunit6e-1168.2
NC_009850:972692:996015996015996740726Arcobacter butzleri RM4018, complete genomeAcrA/AcrE family protein9e-1167.8
NC_012988:670101:6946236946236959031281Methylobacterium extorquens DM4, complete genomeefflux transporter, RND family, membrane fusion protein subunit; RagD-related1e-1067.4
NC_014118:2417838:2419332241933224205521221Burkholderia sp. CCGE1002 chromosome chromosome 2, completeefflux transporter, RND family, MFP subunit2e-1066.6
NC_015589:626321:6294526294526305821131Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRND family efflux transporter MFP subunit4e-1065.9
NC_002939:3043068:3059292305929230604101119Geobacter sulfurreducens PCA, complete genomeefflux transporter, RND family, MFP subunit4e-1065.9
NC_007645:3870466:3893656389365638947501095Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein5e-1065.5
NC_016818:1795576:1838982183898218400461065Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit7e-1065.1
NC_009138:1583988:1588974158897415905481575Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB)8e-1064.7
NC_012982:711122:7604227604227617291308Hirschia baltica ATCC 49814, complete genomeefflux transporter, RND family, MFP subunit1e-0963.9
NC_012724:1308000:1323682132368213248631182Burkholderia glumae BGR1 chromosome 1, complete genomeDrug-efflux protein2e-0963.5
NC_015554:3964000:3972604397260439736501047Alteromonas sp. SN2 chromosome, complete genomeRND family efflux transporter MFP subunit2e-0963.5
NC_014532:1191267:1191267119126711925441278Halomonas elongata DSM 2581, complete genomeefflux transporter, RND family, MFP subunit2e-0963.5
NC_011296:102650:1225931225931237531161Thermodesulfovibrio yellowstonii DSM 11347, complete genomeefflux transporter, RND family, MFP subunit2e-0963.5
NC_014973:4174668:4174668417466841757891122Geobacter sp. M18 chromosome, complete genomeRND family efflux transporter MFP subunit3e-0962.8
NC_011747:115864:1243671243671255751209Escherichia coli S88 plasmid pECOS88, complete sequencePutative type I secretion membrane-fusion protein EtsA3e-0962.8
NC_016631:5438477:5437218543721854384801263Granulicella mallensis MP5ACTX8 chromosome, complete genomeRND family efflux transporter MFP subunit4e-0962.4
NC_009092:521519:5245975245975256791083Shewanella loihica PV-4, complete genomeefflux transporter, RND family, MFP subunit5e-0962
NC_013730:3137391:3157468315746831586101143Spirosoma linguale DSM 74, complete genomeefflux transporter, RND family, MFP subunit5e-0962
NC_015311:2235550:2247955224795522490341080Prevotella denticola F0289 chromosome, complete genomeRND family efflux transporter MFP subunit6e-0961.6
NC_009439:1297851:1324725132472513259901266Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit7e-0961.6
NC_015172:237397:2483062483062494151110Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeefflux transporter, RND family, MFP subunit7e-0961.6
NC_012913:2189862:2208159220815922093551197Aggregatibacter aphrophilus NJ8700, complete genomeAcrA protein7e-0961.6
NC_015424:3112637:3113776311377631149391164Aeromonas veronii B565 chromosome, complete genomeMacrolide-specific efflux protein MacA9e-0961.2
NC_014837:1873020:187712118771211877978858Pantoea sp. At-9b chromosome, complete genomesecretion protein HlyD family protein1e-0860.8
NC_012721:137046:1359461359461370491104Burkholderia glumae BGR1 chromosome 2, complete genomeEfflux transporter, RND family, MFP subunit1e-0860.5
NC_009138:519965:5245815245815261611581Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB)1e-0860.5
NC_015177:2972701:2992043299204329931131071Pedobacter saltans DSM 12145 chromosome, complete genomeefflux transporter, RND family, MFP subunit2e-0860.5
NC_013416:386301:3863013863013874911191Aggregatibacter actinomycetemcomitans D11S-1, complete genomeAcrA protein2e-0860.1
NC_011662:2320100:2349041234904123501021062Thauera sp. MZ1T, complete genomeefflux transporter, RND family, MFP subunit3e-0859.3
NC_000918:465627:4761474761474772711125Aquifex aeolicus VF5, complete genomeacriflavin resistance protein AcrE3e-0859.3
NC_017030:8551795:8557187855718785583651179Corallococcus coralloides DSM 2259 chromosome, complete genomeRND family efflux transporter MFP subunit4e-0858.9
NC_012881:1062629:1070125107012510711651041Desulfovibrio salexigens DSM 2638, complete genomeefflux transporter, RND family, MFP subunit4e-0858.9
NC_016513:689689:6896896896896914761788Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeAcrA protein4e-0858.9
NC_007973:1889076:1896234189623418974301197Ralstonia metallidurans CH34 chromosome 1, complete sequencesecretion protein HlyD5e-0858.5
NC_008319:2172928:2193873219387321950121140Synechococcus sp. CC9311, complete genomeefflux transporter, RND family, MFP subunit subfamily7e-0858.2
NC_018515:3108755:3130208313020831314191212Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRND family efflux transporter MFP subunit8e-0858.2
NC_011992:3752867:3771307377130737724371131Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit9e-0857.8
NC_002655:1053082:1051943105194310530851143Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-0757.4
NC_011184:2840713:2841298284129828424041107Vibrio fischeri MJ11 chromosome I, complete sequenceperiplasmic component of efflux system1e-0757.4
NC_007954:1823085:1843575184357518447081134Shewanella denitrificans OS217, complete genomesecretion protein HlyD2e-0757
NC_003228:2245181:2255859225585922570821224Bacteroides fragilis NCTC 9343, complete genomeputative HlyD family secretion protein1e-0757
NC_006347:2190000:2199605219960522008281224Bacteroides fragilis YCH46, complete genomeperiplasmic component of efflux system1e-0757
NC_016776:2237404:2248295224829522495181224Bacteroides fragilis 638R, complete genomeputative HlyD family secretion protein1e-0757
NC_010627:463646:4796264796264807771152Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceefflux transporter, RND family, MFP subunit2e-0756.6
NC_007508:3925445:3943152394315239442221071Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomemembrane fusion protein2e-0756.6
NC_004663:1499145:1509808150980815110371230Bacteroides thetaiotaomicron VPI-5482, complete genomeperiplasmic component of efflux system2e-0756.6
NC_015424:3277292:3297730329773032987791050Aeromonas veronii B565 chromosome, complete genomeHlyD family secretion protein2e-0756.6
NC_008392:542000:565210565210566205996Burkholderia cepacia AMMD chromosome 3, complete sequenceefflux transporter, RND family, MFP subunit2e-0756.6
NC_007645:1194550:1220397122039712215751179Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein3e-0756.2
NC_014722:1:4704147041483211281Burkholderia rhizoxinica HKI 454, complete genomeMacrolide-specific efflux protein macA2e-0756.2
NC_009092:1504363:1523812152381215249271116Shewanella loihica PV-4, complete genomeefflux transporter, RND family, MFP subunit3e-0755.8
NC_007404:1388049:1410356141035614118671512Thiobacillus denitrificans ATCC 25259, complete genomeSecretion protein HlyD4e-0755.8
NC_014926:1108811:1108811110881111100521242Thermovibrio ammonificans HB-1 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-0755.8
NC_015677:3179910:320437532043753205163789Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein5e-0755.5
NC_018691:4619245:4628501462850146296221122Alcanivorax dieselolei B5 chromosome, complete genomePutative H+-transporting two-sector ATPase, beta subunit5e-0755.5
NC_006834:139500:1537731537731550261254Xanthomonas oryzae pv. oryzae KACC10331, complete genomeacriflavin resistance protein5e-0755.5
NC_010717:129500:1403311403311415841254Xanthomonas oryzae pv. oryzae PXO99A, complete genomeacriflavin resistance protein5e-0755.5
NC_005810:2905362:2907608290760829088131206Yersinia pestis biovar Microtus str. 91001, complete genomeHlyD family secretion protein6e-0755.1
NC_008149:1556581:1574283157428315754881206Yersinia pestis Nepal516, complete genomeHlyD family secretion protein6e-0755.1
NC_006155:3212796:3213667321366732148721206Yersinia pseudotuberculosis IP 32953, complete genomeputative HlyD family (ABC efflux pump associated) secretion protein6e-0755.1
NC_016513:1529691:1545480154548015466221143Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative MacA6e-0755.1
NC_002939:2337402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family6e-0755.1
NC_002939:2315402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family6e-0755.1
NC_010634:3129174:3131420313142031326251206Yersinia pseudotuberculosis PB1/+, complete genomeRND family efflux transporter MFP subunit7e-0755.1
NC_010465:1550617:1572050157205015732551206Yersinia pseudotuberculosis YPIII, complete genomeefflux transporter, RND family, MFP subunit7e-0755.1
NC_010159:2878499:2879370287937028805751206Yersinia pestis Angola, complete genomeefflux ABC transporter, RND family, MFP subunit6e-0755.1
NC_003143:3346834:3349080334908033502851206Yersinia pestis CO92, complete genomeputative HlyD family secretion protein6e-0755.1
NC_008150:2451872:2454118245411824553231206Yersinia pestis Antiqua, complete genomeputative HlyD family secretion protein6e-0755.1
NC_009434:3611738:3698472369847236997791308Pseudomonas stutzeri A1501, complete genomeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein6e-0755.1
NC_017265:1346685:1363521136352113647261206Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative HlyD family secretion protein6e-0755.1
NC_017168:2394079:2411781241178124129861206Yersinia pestis A1122 chromosome, complete genomeRND family efflux transporter MFP subunit6e-0755.1
NC_017160:3326199:3328445332844533296501206Yersinia pestis D182038 chromosome, complete genomeputative HlyD family secretion protein6e-0755.1
NC_017154:3344273:3346519334651933477241206Yersinia pestis D106004 chromosome, complete genomeputative HlyD family secretion protein6e-0755.1
NC_014029:3401238:3403484340348434046891206Yersinia pestis Z176003 chromosome, complete genomeputative HlyD family secretion protein6e-0755.1
NC_009381:2373847:2374718237471823759231206Yersinia pestis Pestoides F chromosome, complete genomeHlyD family secretion protein6e-0755.1
NC_004088:1622941:1644360164436016455651206Yersinia pestis KIM, complete genomemembrane protein, possible efflux component6e-0755.1
NC_008752:2724977:2741757274175727430071251Acidovorax avenae subsp. citrulli AAC00-1, complete genomeefflux transporter, RND family, MFP subunit8e-0754.7
NC_017506:93494:1126691126691138531185Marinobacter adhaerens HP15 chromosome, complete genomecation efflux family protein8e-0754.7
NC_015566:1941407:1961508196150819626921185Serratia sp. AS12 chromosome, complete genomeRND family efflux transporter MFP subunit8e-0754.7
NC_014633:655693:6603646603646614221059Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceRND family efflux transporter MFP subunit7e-0754.7
NC_009708:1522281:1537447153744715386521206Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRND efflux transporter1e-0654.3
NC_015850:1614965:1634820163482016359021083Acidithiobacillus caldus SM-1 chromosome, complete genomeputative RND efflux membrane fusion protein1e-0654.3
NC_013889:1439326:1438100143810014393291230Thioalkalivibrio sp. K90mix chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-0654.3
NC_014910:242845:2499832499832515751593Alicycliphilus denitrificans BC chromosome, complete genomeefflux transporter, rnd family, mfp subunit1e-0653.9
NC_010515:2449143:2451191245119124523841194Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceefflux transporter, RND family, MFP subunit1e-0653.9
NC_003296:1980687:2005379200537920066441266Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN1e-0653.9
NC_013722:751473:7647677647677660231257Xanthomonas albilineans, complete genomeprobable membrane fusion protein.2e-0653.5
NC_015733:5909821:5943165594316559444451281Pseudomonas putida S16 chromosome, complete genomeRND family efflux transporter, MFP subunit2e-0653.5
NC_011146:2200142:2241568224156822428541287Geobacter bemidjiensis Bem, complete genomeefflux transporter, RND family, MFP subunit2e-0653.1
NC_013517:3453500:3470516347051634715261011Sebaldella termitidis ATCC 33386, complete genomeefflux transporter, RND family, MFP subunit2e-0653.1
NC_020126:2299150:2302324230232423036011278Myxococcus stipitatus DSM 14675, complete genomeRND family heavy metal efflux transporter MFP subunit3e-0653.1
NC_008782:1917634:1929468192946819310841617Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit3e-0653.1
NC_012968:1594954:1624912162491216264561545Methylotenera mobilis JLW8, complete genomeefflux transporter, RND family, MFP subunit3e-0653.1
NC_014323:5051041:5069403506940350705931191Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system transmembrane protein3e-0652.8
NC_019757:5852000:5852005585200558533601356Cylindrospermum stagnale PCC 7417, complete genomeRND family efflux transporter, MFP subunit3e-0652.8
NC_009485:1487485:1509330150933015104451116Bradyrhizobium sp. BTAi1 chromosome, complete genomeRND family mulitdrug efflux protein4e-0652.4
NC_014541:1414627:1438113143811314391951083Ferrimonas balearica DSM 9799 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-0652.4
NC_008740:443274:489846489846490487642Marinobacter aquaeolei VT8, complete genomesecretion protein HlyD5e-0652
NC_012880:3748665:3748665374866537498281164Dickeya dadantii Ech703, complete genomeefflux transporter, RND family, MFP subunit5e-0652
NC_019697:4108944:4115472411547241168661395Chamaesiphon minutus PCC 6605, complete genomemultidrug resistance efflux pump6e-0652
NC_013192:305478:3116303116303127511122Leptotrichia buccalis DSM 1135, complete genomeefflux transporter, RND family, MFP subunit8e-0651.6
NC_010501:30000:6609166091673411251Pseudomonas putida W619, complete genomeefflux transporter, RND family, MFP subunit7e-0651.6
NC_002947:8394:4939949399506491251Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family7e-0651.6
NC_009512:27783:6137561375626251251Pseudomonas putida F1, complete genomeefflux transporter, RND family, MFP subunit7e-0651.6
NC_010322:29983:6215762157634071251Pseudomonas putida GB-1 chromosome, complete genomeRND family efflux transporter MFP subunit7e-0651.6
NC_011758:326366:3528763528763541381263Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeefflux transporter, RND family, MFP subunit7e-0651.6
NC_015572:2713599:2732004273200427331791176Methylomonas methanica MC09 chromosome, complete genomeRND family efflux transporter MFP subunit6e-0651.6
NC_015065:162317:1830001830001842201221Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceefflux transporter, RND family, MFP subunit8e-0651.2
NC_017986:2548720:2595574259557425968241251Pseudomonas putida ND6 chromosome, complete genomeRND family efflux transporter MFP subunit8e-0651.2
NC_012811:139498:1582481582481596121365Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative CzrB-like protein; cation efflux system protein8e-0651.2
NC_008577:4611431:4618877461887746199621086Shewanella sp. ANA-3 chromosome 1, complete sequenceefflux transporter, RND family, MFP subunit8e-0651.2
NC_009092:1874888:1895318189531818963821065Shewanella loihica PV-4, complete genomeefflux transporter, RND family, MFP subunit9e-0651.2