Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3913711 Shigella flexneri 2a str. 301, complete genome

Start: 3913711, End: 3914700, Length: 990

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:3453683:3479461347946134833603900Escherichia coli UMN026 chromosome, complete genomeSerine protease0650
NC_004431:3409389:3456362345636234602613900Escherichia coli CFT073, complete genomeAecreted auto transpoter toxin0650
NC_017328:3935185:393937039393703940359990Shigella flexneri 2002017 chromosome, complete genomeSerine protease sat precursor0646
NC_011601:2998326:3005494300549430094113918Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeserine protease1e-73276
CP002797:4411763:4418382441838244221463765Escherichia coli NA114, complete genomePer-activated serine protease autotransporter enterotoxin EspC5e-70264
NC_013717:5726:2232822328262543927Citrobacter rodentium ICC168 plasmid pCROD1, complete sequenceputative serine protease autotransporter8e-69260
CU928145:4792703:4796367479636748002243858Escherichia coli 55989 chromosome, complete genomeSerine protease pet precursor (Plasmid-encoded toxin pet)2e-68259
NC_004741:3041294:3052614305261430564713858Shigella flexneri 2a str. 2457T, complete genomeserine protease2e-68259
NC_004337:3049118:3060438306043830642953858Shigella flexneri 2a str. 301, complete genomeserine protease2e-68259
NC_011748:4792703:4796367479636748002243858Escherichia coli 55989, complete genomeSerine protease pet precursor (Plasmid-encoded toxin pet)2e-68259
NC_017328:3088907:3100227310022731040843858Shigella flexneri 2002017 chromosome, complete genomeSerine protease2e-68259
NC_007384:3383983:3389961338996133938183858Shigella sonnei Ss046, complete genomeserine protease2e-68259
NC_016822:3420826:3430127343012734339843858Shigella sonnei 53G, complete genomeserine protease2e-68259
NC_011745:3443371:3448048344804834498051758Escherichia coli ED1a chromosome, complete genome2e-67256
CP002797:4411763:4425162442516244290943933Escherichia coli NA114, complete genomehypothetical protein1e-22107
NC_017501:1633436:1642874164287416475324659Neisseria meningitidis 8013, complete genomeIgA-specific serine endopeptidase (IgA protease)6e-22105
NC_003112:719490:7257087257087311555448Neisseria meningitidis MC58, complete genomeIgA-specific serine endopeptidase4e-22105
NC_013716:4306695:4356883435688343607313849Citrobacter rodentium ICC168, complete genomeputative adhesin autotransporter1e-21103
NC_004431:324000:3262093262093303244116Escherichia coli CFT073, complete genomePic serine protease precursor2e-21103
NC_017514:1520245:1527968152796815334185451Neisseria meningitidis M01-240149 chromosome, complete genomeIgA-specific serine endopeptidase4e-21102
CU928145:3360967:3360967336096733650854119Escherichia coli 55989 chromosome, complete genomeSerine protease pic precursor (ShMu)3e-21102
NC_011748:3360967:3360967336096733650854119Escherichia coli 55989, complete genomeSerine protease pic precursor (ShMu)3e-21102
NC_017328:3088907:3107526310752631116444119Shigella flexneri 2002017 chromosome, complete genomeSerine protease pic precursor3e-21102
NC_010120:662969:6669996669996723625364Neisseria meningitidis 053442, complete genomeIgA-specific serine endopeptidase3e-21102
NC_017512:642229:6454606454606508955436Neisseria meningitidis WUE 2594, complete genomeIgA-specific serine endopeptidase (IgA protease)7e-21101
NC_003116:867943:8742588742588795795322Neisseria meningitidis Z2491, complete genomeIgA1 protease9e-21101
NC_017505:721395:7277097277097331925484Neisseria meningitidis alpha710 chromosome, complete genomeIgA1 protease9e-21101
NC_013016:633313:6364416364416419395499Neisseria meningitidis alpha14 chromosome, complete genomeIgA-specific serine endopeptidase2e-20100
NC_017515:1555500:1562134156213415674945361Neisseria meningitidis M04-240196 chromosome, complete genomeIgA-specific serine endopeptidase1e-20100
NC_010498:3988351:3993788399378839975973810Escherichia coli SMS-3-5, complete genomeouter membrane autotransporter4e-2099
NC_017517:749031:7552647552647605975334Neisseria meningitidis M01-240355 chromosome, complete genomeIgA-specific serine endopeptidase9e-2097.8
NC_013353:3853082:3873591387359138776824092Escherichia coli O103:H2 str. 12009, complete genomesecreted autotransporter serine protease1e-1894
AP010958:3853082:3873591387359138776824092Escherichia coli O103:H2 str. 12009 DNA, complete genomesecreted autotransporter serine protease1e-1894
NC_009790:42112:4930649306534064101Escherichia coli E24377A plasmid pETEC_74, complete sequencesecreted serine peptidase EatA5e-1892
NC_014561:76931:8309083090849131824Pantoea vagans C9-1 plasmid pPag1, complete sequenceIgA-specific serine endopeptidase5e-1892
NC_010067:1655815:1669131166913116732854155Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1685.1
CU928159:30700:419514195142700750Escherichia coli str. 55989 plasmid 55989p, complete genomeSerine protease sepA precursor (fragment)1e-1584
NC_015761:1181186:1200390120039012045444155Salmonella bongori NCTC 12419, complete genomehemoglobin protease1e-1480.9
NC_004337:3049118:3067738306773830709503213Shigella flexneri 2a str. 301, complete genomeserine protease precurser3e-1479.7
NC_004741:3041294:3059914305991430631263213Shigella flexneri 2a str. 2457T, complete genomeserine protease precurser3e-1479.7
NC_013508:3188978:3206465320646532099893525Edwardsiella tarda EIB202, complete genometemperature sensitive hemagglutinin5e-1478.6
NC_008253:334467:3640503640503681804131Escherichia coli 536, complete genomeSepA4e-1375.9
NC_011742:291237:2967172967173008474131Escherichia coli S88 chromosome, complete genomeVacuolating autotransporter toxin4e-1375.9
NC_004431:364000:3718773718773760074131Escherichia coli CFT073, complete genomeHaemoglobin protease4e-1375.9