Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3791744 Shigella flexneri 2a str. 301, complete genome

Start: 3791744, End: 3792367, Length: 624

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:3778000:381826038182603818883624Salmonella enterica subsp. enterica serovar Schwarzengrund strguanylate kinase5e-115413
NC_012731:5074000:509228450922845092964681Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeguanylate kinase6e-111399
NC_016845:5162481:518081651808165181439624Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,guanylate kinase1e-110399
NC_009648:4359875:437816143781614378784624Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeguanylate kinase1e-110399
NC_011283:105245:105575105575106198624Klebsiella pneumoniae 342 chromosome, complete genomeguanylate kinase2e-110397
NC_020260:4029951:404789340478934048516624Cronobacter sakazakii Sp291, complete genomeguanylate kinase2e-109394
NC_009778:4014026:403195540319554032578624Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-109394
NC_013961:73037:755127551276204693Erwinia amylovora, complete genomeguanylate kinase1e-107388
NC_013971:73037:755127551276135624Erwinia amylovora ATCC 49946 chromosome, complete genomeguanylate kinase3e-107387
NC_010694:63654:661296612966752624Erwinia tasmaniensis, complete genomeGuanylate kinase4e-107386
NC_020064:4751097:477073947707394771362624Serratia marcescens FGI94, complete genomeguanylate kinase4e-106383
NC_013956:4326388:434381043438104344484675Pantoea ananatis LMG 20103 chromosome, complete genomeGmk2e-105380
NC_016816:127802:130261130261130884624Pantoea ananatis LMG 5342, complete genomeguanylate kinase5e-105380
NC_008800:36500:580715807158694624Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,guanylate kinase9e-104375
NC_009832:5369566:539044853904485391071624Serratia proteamaculans 568, complete genomeGuanylate kinase1e-99362
NC_005126:274000:290958290958291581624Photorhabdus luminescens subsp. laumondii TTO1, complete genomeguanylate kinase3e-94343
NC_013508:26348:328033280333426624Edwardsiella tarda EIB202, complete genomeguanylate kinase8e-92336
NC_008309:1628939:165142016514201652058639Haemophilus somnus 129PT, complete genomeguanylate kinase9e-70262
NC_007912:4661141:468047146804714681148678Saccharophagus degradans 2-40, complete genomeGuanylate kinase1e-66252
NC_014532:3967463:398399839839983984630633Halomonas elongata DSM 2581, complete genomeguanylate kinase2e-59228
NC_009138:2110500:212955021295502130194645Herminiimonas arsenicoxydans, complete genomeguanylate kinase1e-56219
NC_008260:187269:187269187269187892624Alcanivorax borkumensis SK2, complete genomeguanylate kinase2e-56218
NC_014307:1271121:129290012929001293565666Ralstonia solanacearum CFBP2957 chromosome, complete genomeguanylate kinase8e-55213
NC_015381:992401:101823010182301018904675Burkholderia gladioli BSR3 chromosome 1, complete sequenceguanylate kinase1e-52205
NC_014752:617987:619548619548620165618Neisseria lactamica ST-640, complete genomeguanylate kinase3e-49194
NC_007517:2632233:263473126347312635342612Geobacter metallireducens GS-15, complete genomeGuanylate kinase8e-49193
NC_017042:1206000:120883412088341209523690Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeguanylate kinase4e-48191
NC_016050:1088223:110676911067691107458690Rickettsia japonica YH, complete genomeguanylate kinase8e-48189
NC_016913:83988:865998659987288690Rickettsia rickettsii str. Brazil chromosome, complete genomeguanylate kinase4e-47187
NC_015873:1933036:193590019359001936514615Megasphaera elsdenii DSM 20460, complete genomeguanylate kinase1e-46185
NC_011979:2352961:237877223787722379380609Geobacter sp. FRC-32, complete genomeGuanylate kinase3e-46184
NC_012785:1960500:197984919798491980481633Kosmotoga olearia TBF 19.5.1, complete genomeguanylate kinase8e-45179
NC_019970:1457794:146193214619321462543612Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeguanylate kinase1e-44179
NC_020291:1389114:141054514105451411183639Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeguanylate kinase Gmk3e-43174
NC_014657:914071:939215939215939814600Caldicellulosiruptor owensensis OL chromosome, complete genomeguanylate kinase2e-42172
NC_016751:1623756:162697516269751627598624Marinitoga piezophila KA3 chromosome, complete genomeguanylate kinase1e-41169
NC_009012:1595498:159871915987191599330612Clostridium thermocellum ATCC 27405, complete genomeGuanylate kinase1e-41169
NC_009616:99647:102961102961103575615Thermosipho melanesiensis BI429 chromosome, complete genomeguanylate kinase2e-41168
NC_011653:331986:336514336514337146633Thermosipho africanus TCF52B, complete genomegmk guanylate kinase3e-41168
NC_021171:1354000:137461113746111375225615Bacillus sp. 1NLA3E, complete genomeguanylate kinase6e-41167
NC_009802:1525144:155613715561371556748612Campylobacter concisus 13826, complete genomeguanylate kinase5e-41167
NC_007498:1491223:150660715066071507239633Pelobacter carbinolicus DSM 2380, complete genomeguanylate kinase4e-41167
NC_009483:3727490:373320537332053733813609Geobacter uraniireducens Rf4 chromosome, complete genomeguanylate kinase7e-41166
NC_009482:619467:640554640554641120567Synechococcus sp. RCC307 chromosome, complete genomeguanylate kinase3e-40164
NC_016627:3205333:320718532071853207793609Clostridium clariflavum DSM 19732 chromosome, complete genomeguanylate kinase5e-40164
NC_002570:2616899:263210026321002632714615Bacillus halodurans C-125, complete genomeguanylate kinase5e-40164
NC_008555:1874878:187643418764341877051618Listeria welshimeri serovar 6b str. SLCC5334, complete genomeguanylate kinase2e-39162
NC_013223:343344:364202364202364840639Desulfohalobium retbaense DSM 5692, complete genomeguanylate kinase2e-39162
NC_013768:1983711:198766619876661988286621Listeria monocytogenes 08-5923, complete genomehypothetical protein1e-39162
NC_020419:782337:802439802439803119681Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeguanylate kinase3e-39161
NS_000191:782337:802439802439803119681Uncultured Termite group 1 bacterium phylotype Rs-D17, completeguanylate kinase3e-39161
NC_015161:523278:523802523802524566765Deinococcus proteolyticus MRP chromosome, complete genomeGuanylate kinase1e-38159
NC_012796:3600630:368415736841573684789633Desulfovibrio magneticus RS-1, complete genomeguanylate kinase1e-38159
NC_007350:1629694:162969416296941630317624Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,guanylate kinase2e-37155
NC_020134:2193900:220046922004692201041573Clostridium stercorarium subsp. stercorarium DSM 8532, completeguanylate kinase Gmk2e-36151
NC_007775:2702045:271210927121092712762654Synechococcus sp. JA-3-3Ab, complete genomeputative guanylate kinase3e-36151
NC_016148:1175999:118312011831201183701582Thermovirga lienii DSM 17291 chromosome, complete genomeguanylate kinase3e-36151
NC_002973:1877905:188186018818601882477618Listeria monocytogenes str. 4b F2365, complete genomeguanylate kinase family protein7e-36150
NC_011660:724711:741118741118741738621Listeria monocytogenes HCC23 chromosome, complete genomeguanylate kinase7e-36150
NC_013515:550464:564756564756565301546Streptobacillus moniliformis DSM 12112, complete genomeguanylate kinase2e-35149
NC_013192:1993718:199714119971411997686546Leptotrichia buccalis DSM 1135, complete genomeguanylate kinase5e-35147
NC_013517:3082279:308653830865383087083546Sebaldella termitidis ATCC 33386, complete genomeguanylate kinase2e-33141
NC_004663:2509433:252512625251262525740615Bacteroides thetaiotaomicron VPI-5482, complete genomeguanylate kinase1e-32139
NC_019908:700000:720617720617721168552Brachyspira pilosicoli P43/6/78 chromosome, complete genomeguanylate kinase4e-32137
NC_012225:787737:802842802842803393552Brachyspira hyodysenteriae WA1, complete genomeguanylate kinase4e-30131
NC_014314:69872:833838338383964582Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeguanylate kinase2e-29129
NC_015846:493388:494751494751495323573Capnocytophaga canimorsus Cc5 chromosome, complete genomeGMP kinase2e-29129
NC_002935:1315019:134068113406811341256576Corynebacterium diphtheriae NCTC 13129, complete genomeguanylate kinase3e-28125
NC_016783:1313008:133867013386701339245576Corynebacterium diphtheriae INCA 402 chromosome, complete genomeguanylate kinase3e-28125
NC_016787:1276983:130379013037901304365576Corynebacterium diphtheriae HC03 chromosome, complete genomeguanylate kinase3e-28125
NC_016789:1334514:136018113601811360756576Corynebacterium diphtheriae PW8 chromosome, complete genomeguanylate kinase3e-28125
NC_016790:1259356:128116912811691281744576Corynebacterium diphtheriae VA01 chromosome, complete genomeguanylate kinase3e-28125
NC_016799:1343020:136982613698261370401576Corynebacterium diphtheriae 31A chromosome, complete genomeguanylate kinase3e-28125
NC_017243:1229597:123296512329651233516552Brachyspira intermedia PWS/A chromosome, complete genomeguanylate kinase2e-28125
NC_015677:3339181:335036533503653351132768Ramlibacter tataouinensis TTB310 chromosome, complete genomeguanylate kinase (GMP kinase)3e-2098.6
NC_008054:1649160:168916716891671689709543Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeGuanylate kinase4e-1271.2
NC_014829:4057318:405916840591684059776609Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeguanylate kinase3e-1168.6
NC_012985:1:780378038363561Candidatus Liberibacter asiaticus str. psy62, complete genomeguanylate kinase1e-0963.2
NC_012985:1191125:119517211951721195729558Candidatus Liberibacter asiaticus str. psy62, complete genomeguanylate kinase7e-0960.5
NC_012917:569856:570995570995571564570Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN1e-0653.1
NC_014774:1210004:125597812559781256412435Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeguanylate kinase3e-0652