Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3756257 Shigella flexneri 2a str. 301, complete genome

Start: 3756257, End: 3756724, Length: 468

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:88500:112880112880113347468Escherichia coli KO11FL chromosome, complete genomeprotein-export protein SecB5e-89325
NC_012947:94930:119543119543120010468Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepreprotein translocase subunit SecB5e-89325
CP002516:88500:112880112880113347468Escherichia coli KO11, complete genomeprotein-export protein SecB5e-89325
NC_010468:80000:104451104451104918468Escherichia coli ATCC 8739, complete genomeprotein-export protein SecB1e-88324
NC_016816:127802:171275171275171745471Pantoea ananatis LMG 5342, complete genomeprotein-export protein SecB2e-76284
NC_013892:4129500:415011441501144150587474Xenorhabdus bovienii SS-2004 chromosome, complete genomemolecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway)2e-73274
NC_020418:603750:608094608094608567474Morganella morganii subsp. morganii KT, complete genomeProtein export cytoplasm chaperone protein2e-70263
NC_015572:293665:295468295468295944477Methylomonas methanica MC09 chromosome, complete genomeProtein-export protein secB3e-41167
NC_007520:2128178:214600121460012146450450Thiomicrospira crunogena XCL-2, complete genomeprotein-export protein SecB1e-40164
NC_013851:3392644:341519834151983415671474Allochromatium vinosum DSM 180 chromosome, complete genomeprotein-export protein SecB3e-40164
NC_007508:237771:241429241429241941513Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeexport protein SecB8e-34142
NC_013016:419604:419604419604420047444Neisseria meningitidis alpha14 chromosome, complete genomepreprotein translocase subunit SecB2e-30131
NC_015850:736680:738154738154738603450Acidithiobacillus caldus SM-1 chromosome, complete genomeprotein export cytoplasm chaperone protein5e-30130
NC_008767:451983:451983451983452426444Neisseria meningitidis FAM18, complete genomeputative protein-export protein8e-30129
NC_010120:452771:454755454755455198444Neisseria meningitidis 053442, complete genomeprotein-export protein8e-30129
NC_017514:446616:448601448601449044444Neisseria meningitidis M01-240149 chromosome, complete genomeprotein-export chaperone SecB8e-30129
NC_017518:577159:579144579144579587444Neisseria meningitidis NZ-05/33 chromosome, complete genomeprotein-export chaperone SecB8e-30129
NC_017513:449949:449949449949450392444Neisseria meningitidis G2136 chromosome, complete genomeprotein-export chaperone SecB1e-29128
NC_017512:425085:427070427070427513444Neisseria meningitidis WUE 2594, complete genomepreprotein translocase SecB subunit1e-29128
NC_003116:658879:660864660864661307444Neisseria meningitidis Z2491, complete genomeexport protein SecB1e-29128
NC_016616:1336000:133731213373121337776465Dechlorosoma suillum PS chromosome, complete genomeprotein-export chaperone SecB4e-28123
NC_015696:105748:112992112992113441450Francisella sp. TX077308 chromosome, complete genomeprotein export cytoplasm chaperone protein SecB2e-26117
NC_010336:733751:746984746984747433450Francisella philomiragia subsp. philomiragia ATCC 25017, completepreprotein translocase, subunit B2e-25115
NC_012026:75812:906729067291199528Anaplasma marginale str. Florida, complete genomeprotein export chaperone (secB)2e-1685.1
NC_007354:1087456:108826210882621088795534Ehrlichia canis str. Jake, complete genomeprotein export chaperone SecB2e-1684.7
NC_017062:61500:811998119981657459Rickettsia typhi str. B9991CWPP chromosome, complete genomepreprotein translocase subunit SecB2e-1478.2
NC_016913:1066790:107087910708791071337459Rickettsia rickettsii str. Brazil chromosome, complete genomepreprotein translocase subunit SecB5e-1476.6
NC_017044:80384:987119871199169459Rickettsia parkeri str. Portsmouth chromosome, complete genomepreprotein translocase subunit SecB5e-1476.6
NC_008044:3024125:302711530271153027609495Silicibacter sp. TM1040, complete genomeprotein-export protein SecB1e-1375.1
NC_007802:179780:185217185217185732516Jannaschia sp. CCS1, complete genomeprotein-export protein SecB5e-1373.6
NC_010793:1628500:162961716296171630111495Orientia tsutsugamushi str. Ikeda, complete genomeprotein-export protein SecB2e-1271.6
NC_009952:3596399:363014436301443630662519Dinoroseobacter shibae DFL 12, complete genomeprotein-export protein SecB1e-1168.9