Pre_GI: BLASTP Hits

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Query: NC_004337:2478461:2498631 Shigella flexneri 2a str. 301, complete genome

Start: 2498631, End: 2499617, Length: 987

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:1419413:142483614248361425822987Escherichia coli KO11FL chromosome, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase0683
CP002516:1419413:142483614248361425822987Escherichia coli KO11, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase0683
NC_004741:2456297:247676924767692477755987Shigella flexneri 2a str. 2457T, complete genomelipid A biosynthesis lauroyl acyltransferase0683
NC_007606:2353098:237280523728052373791987Shigella dysenteriae Sd197, complete genomeputative heat shock protein0682
NC_007384:2587876:260873626087362609722987Shigella sonnei Ss046, complete genomeputative heat shock protein0680
NC_007613:2376974:239750823975082398494987Shigella boydii Sb227, complete genomeputative heat shock protein0679
NC_009800:2505872:252704725270472527967921Escherichia coli HS, complete genomelipid A biosynthesis lauroyl acyltransferase family protein0639
CU928160:2513000:253255025325502533470921Escherichia coli IAI1 chromosome, complete genomepalmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase0639
CP002185:2659628:268010126801012681021921Escherichia coli W, complete genomepalmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase0639
AP010958:2911741:294663929466392947559921Escherichia coli O103:H2 str. 12009 DNA, complete genomepalmitoleoyl-acyl carrier protein (ACP)-dependentacyltransferase Ddg0639
NC_010468:1412791:141452114145211415441921Escherichia coli ATCC 8739, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase0639
NC_008258:2473000:249243724924372493357921Shigella flexneri 5 str. 8401, complete genomeputative heat shock protein0639
NC_011353:3276734:332789433278943328814921Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelipid A biosynthesis palmitoleoyl acyltransferase0639
NC_011741:2513000:253255025325502533470921Escherichia coli IAI1 chromosome, complete genomelipid A biosynthesis palmitoleoyl acyltransferase0639
NC_012947:1363724:136545413654541366374921Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelipid A biosynthesis palmitoleoyl acyltransferase0639
NC_012967:2409500:242986924298692430789921Escherichia coli B str. REL606 chromosome, complete genomelipid A biosynthesis palmitoleoyl acyltransferase0639
NC_013353:2911741:294663929466392947559921Escherichia coli O103:H2 str. 12009, complete genomepalmitoleoyl-acyl carrier protein (ACP)-dependentacyltransferase Ddg0639
NC_013941:2928000:296484829648482965768921Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein0639
NC_017328:2516000:253633925363392537259921Shigella flexneri 2002017 chromosome, complete genomeLipid A biosynthesis lauroyl acyltransferase family protein0639
NC_009801:2639787:265915126591512660071921Escherichia coli E24377A, complete genomelipid A biosynthesis lauroyl acyltransferase family protein0638
NC_016822:2678691:270088427008842701804921Shigella sonnei 53G, complete genomelipid A biosynthesis palmitoleoyl acyltransferase0636
NC_010658:2529033:255033925503392551259921Shigella boydii CDC 3083-94, complete genomelipid A biosynthesis lauroyl acyltransferase family protein0635
NC_011601:2614691:265205326520532652973921Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomelipid A biosynthesis palmitoleoyl acyltransferase2e-180631
NC_011745:2751437:277038327703832771303921Escherichia coli ED1a chromosome, complete genomelipid A biosynthesis palmitoleoyl acyltransferase2e-180631
NC_011742:2533500:255254425525442553464921Escherichia coli S88 chromosome, complete genomelipid A biosynthesis palmitoleoyl acyltransferase2e-180631
NC_008563:2610499:262944926294492630369921Escherichia coli APEC O1, complete genomelipid A biosynthesis palmitoleoyl acyltransferase2e-180631
NC_008253:2499735:251907325190732519993921Escherichia coli 536, complete genomeputative acyltransferase8e-180629
NC_003198:2453074:247446024744602475380921Salmonella enterica subsp. enterica serovar Typhi str. CT18,lipid A biosynthesis lauroyl acyltransferase5e-166583
NC_011294:2492168:251361325136132514533921Salmonella enterica subsp. enterica serovar Enteritidis strlipid A biosynthesis palmitoleoyl acyltransferase3e-165581
NC_011205:2621415:264070026407002641620921Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-165581
NC_011274:2483038:250451225045122505432921Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91lipid A biosynthesis palmitoleoyl acyltransferase2e-165581
NC_015761:2373967:239481123948112395731921Salmonella bongori NCTC 12419, complete genomeacyltransferase2e-163574
NC_015968:3301958:333344933334493334366918Enterobacter asburiae LF7a chromosome, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase2e-154545
NC_014121:3776902:379552237955223796439918Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelipid A biosynthesis lauroyl acyltransferase family protein2e-152538
NC_004547:843475:853003853003853935933Erwinia carotovora subsp. atroseptica SCRI1043, complete genomelipid A biosynthesis lauroyl acyltransferase1e-124446
NC_013956:4326388:4338451433845143394641014Pantoea ananatis LMG 20103 chromosome, complete genomeDdg2e-123442
NC_016816:127802:135304135304136227924Pantoea ananatis LMG 5342, complete genomelipid A biosynthesis acyltransferase3e-123441
NC_013850:3303500:332103133210313321945915Klebsiella variicola At-22 chromosome, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase2e-122439
NC_013592:713036:758654758654759574921Dickeya dadantii Ech586, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase4e-119427
NC_011283:4966471:500201350020135002921909Klebsiella pneumoniae 342 chromosome, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase2e-116418
NC_012779:3176820:318356231835623184488927Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-112404
NC_020418:2084937:209150420915042092433930Morganella morganii subsp. morganii KT, complete genomeLipid A biosynthesis lauroyl acyltransferase4e-94345
NC_020211:2012480:201633320163332017253921Serratia marcescens WW4, complete genomelauryl-acyl carrier protein (ACP)-dependent acyltransferase3e-93342
NC_015968:1709680:172940017294001730326927Enterobacter asburiae LF7a chromosome, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase4e-93341
NC_016514:1701273:171917017191701720096927Enterobacter cloacae EcWSU1 chromosome, complete genomelipid A biosynthesis lauroyl acyltransferase9e-92337
NC_014306:1810548:182323518232351824155921Erwinia billingiae Eb661, complete genomeLipid A biosynthesis lauroyl acyltransferase6e-87321
NC_012912:1788308:183262818326281833548921Dickeya zeae Ech1591, complete genomelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase2e-85315
NC_000907:1568867:159728015972801598215936Haemophilus influenzae Rd KW20, complete genomelipid A biosynthesis lauroyl acyltransferase3e-79295
NC_016513:1924242:193282619328261933761936Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completelipid A biosynthesis lauroyl acyltransferase6e-77287
NC_013416:1588369:159689615968961597831936Aggregatibacter actinomycetemcomitans D11S-1, complete genomelipid A biosynthesis lauroyl acyltransferase (Heat shockprotein B)6e-77287
NC_008463:1912348:191662419166241917562939Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative lipid A biosynthesis lauroyl/myristoyl acyltransferase1e-69263
NC_011186:819828:833595833595834542948Vibrio fischeri MJ11 chromosome II, complete sequencelipid A biosynthesis lauroyl acyltransferase (Heat shockprotein B)2e-65249
NC_006841:750000:760779760779761714936Vibrio fischeri ES114 chromosome II, complete sequencelipid A biosynthesis lauroyl acyltransferase7e-65247
NC_005773:1851116:186796618679661868898933Pseudomonas syringae pv. phaseolicola 1448A, complete genomelipid A biosynthesis lauroyl acyltransferase3e-64245
NC_011901:491783:511012511012511965954Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase3e-62239
NC_010995:1648897:165121816512181652135918Cellvibrio japonicus Ueda107, complete genomelipid A biosynthesis lauroyl acyltransferase5e-61234
NC_016602:173314:175249175249176199951Vibrio furnissii NCTC 11218 chromosome 1, complete sequencelipid A biosynthesis lauroyl acyltransferase4e-58225
NC_013456:212150:214118214118215068951Vibrio sp. Ex25 chromosome 1, complete genomelipid A biosynthesis lauroyl acyltransferase5e-56218
NC_013889:325118:327886327886328854969Thioalkalivibrio sp. K90mix chromosome, complete genomelipid A biosynthesis acyltransferase2e-45183
NC_015696:47484:620736207362975903Francisella sp. TX077308 chromosome, complete genomeLipid A biosynthesis lauroyl acyltransferase8e-44177
NC_019940:424000:443099443099444016918Thioflavicoccus mobilis 8321 chromosome, complete genomeLauroyl/myristoyl acyltransferase6e-41167
NC_015696:47484:610896108962012924Francisella sp. TX077308 chromosome, complete genomeLipid A biosynthesis lauroyl acyltransferase7e-39161
NC_017513:1331623:135807413580741358943870Neisseria meningitidis G2136 chromosome, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase4e-37155
NC_008767:1321129:134296113429611343830870Neisseria meningitidis FAM18, complete genomeputative acetyltransferase4e-37155
NC_003116:1518110:153700115370011537870870Neisseria meningitidis Z2491, complete genomelipid A biosynthesis lauroyl acyltransferase3e-36152
NC_017512:1294970:131404413140441314925882Neisseria meningitidis WUE 2594, complete genomeputative lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase4e-36152
NC_017505:1370128:139417413941741395055882Neisseria meningitidis alpha710 chromosome, complete genomelipid A biosynthesis lauroyl acyltransferase4e-36152
NC_017518:1449923:147240114724011473282882Neisseria meningitidis NZ-05/33 chromosome, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase6e-36151
NC_013016:1289975:130988513098851310766882Neisseria meningitidis alpha14 chromosome, complete genomelipid A biosynthesis lauroyl acyltransferase1e-35150
NC_003112:1423528:145373214537321454601870Neisseria meningitidis MC58, complete genomelipid A biosynthesis lauroyl acyltransferase1e-34147
NC_016513:1859767:187363218736321874588957Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completelipid A biosynthesis lauroyl acyltransferase7e-33141
NC_013416:1526920:153848115384811539437957Aggregatibacter actinomycetemcomitans D11S-1, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase7e-33141
NC_015563:1129469:115330011533001154166867Delftia sp. Cs1-4 chromosome, complete genomelipid A biosynthesis acyltransferase5e-30131
NC_016602:103878:150451150451151365915Vibrio furnissii NCTC 11218 chromosome 1, complete sequencelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase7e-28124
NC_008740:876115:897076897076897984909Marinobacter aquaeolei VT8, complete genomelipid A biosynthesis acyltransferase1e-27124
NC_020209:4768500:480726248072624808149888Pseudomonas poae RE*1-1-14, complete genomelipid A biosynthesis lauroyl acyltransferase6e-27121
NC_017319:192482:194590194590195534945Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase1e-22107
NC_007385:157516:159624159624160568945Shigella sonnei Ss046 plasmid pSS_046, complete sequenceMsbB21e-22107
NC_007607:87000:890458904589989945Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceMsbB21e-22107
NC_004851:191709:194662194662195606945Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencelipid A biosynthesis lauroyl acyltransferase1e-22107
NC_007384:1355060:136022313602231361194972Shigella sonnei Ss046, complete genomesuppressor of htrB, heat shock protein3e-22106
CU928160:1978500:200313120031312004102972Escherichia coli IAI1 chromosome, complete genomemyristoyl-acyl carrier protein (ACP)-dependent acyltransferase3e-22106
NC_011741:1978500:200313120031312004102972Escherichia coli IAI1 chromosome, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase3e-22106
NC_013361:2591829:261642826164282617399972Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase3e-22106
NC_013364:2355298:237989823798982380869972Escherichia coli O111:H- str. 11128, complete genomemyristoyl-acyl carrier protein (ACP)-dependent acyltransferase3e-22106
NC_016822:1339058:134306413430641344035972Shigella sonnei 53G, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase3e-22106
NC_002516:6255854:142351423515122888Pseudomonas aeruginosa PAO1, complete genomelipid A biosynthesis lauroyl acyltransferase5e-22105
NC_007608:97092:9920099200100144945Shigella boydii Sb227 plasmid pSB4_227, complete sequenceMsbB22e-21103
NC_009783:649500:665291665291666280990Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein5e-21102
NC_011750:4947500:496326849632684964212945Escherichia coli IAI39 chromosome, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase5e-21102
NC_010660:175200:177308177308178252945Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase4e-21102
NC_017328:1075535:110162311016231102567945Shigella flexneri 2002017 chromosome, complete genomeLipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase3e-21102
NC_007508:4476726:4493322449332244943381017Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomelipid A biosynthesis lauroyl acyltransferase5e-1995.5
NC_003902:4430621:444453744445374445451915Xanthomonas campestris pv. campestris str. ATCC 33913, completelipid A biosynthesis lauroyl acyltransferase6e-1995.1
NC_007086:4489153:450212045021204503034915Xanthomonas campestris pv. campestris str. 8004, complete genomelipid A biosynthesis lauroyl acyltransferase6e-1995.1
NC_019908:2285819:229346422934642294393930Brachyspira pilosicoli P43/6/78 chromosome, complete genomelipid A biosynthesis lauroyl acyltransferase6e-1581.6
NC_018604:2377549:239094123909412391870930Brachyspira pilosicoli WesB complete genomelipid A biosynthesis lauroyl acyltransferase2e-1480.1
NC_011026:2269986:230646023064602307368909Chloroherpeton thalassium ATCC 35110, complete genomelipid A biosynthesis acyltransferase3e-1479.7
NC_012108:2065355:206446220644622065358897Desulfobacterium autotrophicum HRM2, complete genomeMsbB3e-1479.7
NC_015947:3991696:400768540076854008605921Burkholderia sp. JV3 chromosome, complete genomelipid A biosynthesis acyltransferase3e-1479.3
NC_011071:4000620:402654540265454027465921Stenotrophomonas maltophilia R551-3, complete genomelipid A biosynthesis acyltransferase4e-1479
NC_014150:1304573:131384113138411314773933Brachyspira murdochii DSM 12563 chromosome, complete genomelipid A biosynthesis acyltransferase2e-1377
NC_017243:393749:405067405067406020954Brachyspira intermedia PWS/A chromosome, complete genomelipid A biosynthesis acyltransferase1e-1171.2
NC_017515:1855114:187096618709661871817852Neisseria meningitidis M04-240196 chromosome, complete genomelipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase1e-1170.9
NC_012438:50845:660956609566979885Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomelipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase superfamily protein1e-1170.9
NC_009790:42112:624606246063405946Escherichia coli E24377A plasmid pETEC_74, complete sequence5e-1168.9
NC_017501:1863417:187990918799091880805897Neisseria meningitidis 8013, complete genomeputative lipid A biosynthesis lauroyl acyltransferase (heat shock protein B)5e-1168.9
NC_017033:276741:292931292931293821891Frateuria aurantia DSM 6220 chromosome, complete genomeLauroyl/myristoyl acyltransferase3e-0963.2
NC_016629:3308329:332945833294583330372915Desulfovibrio africanus str. Walvis Bay chromosome, completelipid A biosynthesis acyltransferase3e-0962.8
NC_017187:1683619:170655917065591707473915Arcobacter butzleri ED-1, complete genomelipid A biosynthesis lauroyl acyltransferase6e-0962
NC_010803:301753:307440307440308363924Chlorobium limicola DSM 245, complete genomelipid A biosynthesis acyltransferase7e-0961.6
NC_019892:7223372:723938972393897240351963Singulisphaera acidiphila DSM 18658 chromosome, complete genomeLauroyl/myristoyl acyltransferase8e-0961.6
NC_009850:1822239:182300918230091823923915Arcobacter butzleri RM4018, complete genomelipid A biosynthesis lauroyl acyltransferase9e-0858.2
NC_008639:378181:383525383525384421897Chlorobium phaeobacteroides DSM 266, complete genomelipid A biosynthesis acyltransferase8e-0858.2
NC_007514:1936812:195262519526251953548924Chlorobium chlorochromatii CaD3, complete genomeacyltransferase, HtrB/MsbB family2e-0757
NC_015563:1129469:115245211524521153303852Delftia sp. Cs1-4 chromosome, complete genomelipid A biosynthesis acyltransferase2e-0756.6
NC_014166:2217790:224472522447252245615891Arcobacter nitrofigilis DSM 7299 chromosome, complete genomelipid A biosynthesis acyltransferase6e-0755.5
NC_013037:6209424:622399562239956224921927Dyadobacter fermentans DSM 18053, complete genomelipid A biosynthesis acyltransferase6e-0755.5
NC_014935:1389000:139115013911501392142993Nitratifractor saLSUginis DSM 16511 chromosome, complete genomelipid a biosynthesis acyltransferase3e-0652.8
NC_017051:878514:900370900370901053684Rickettsia prowazekii str. Dachau chromosome, complete genomelipid A biosynthesis lauroyl acyltransferase7e-0651.6