Pre_GI: BLASTP Hits

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Query: NC_004337:2035945:2037954 Shigella flexneri 2a str. 301, complete genome

Start: 2037954, End: 2038805, Length: 852

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008258:2045000:204661720466172047468852Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-168589
NC_017328:2090679:209355120935512094402852Shigella flexneri 2002017 chromosome, complete genomeChaperone protein hchA6e-167586
NC_008253:1938975:194062919406291941480852Escherichia coli 536, complete genomechaperone protein HchA7e-167586
NC_004431:2185750:218747321874732188324852Escherichia coli CFT073, complete genomechaperone protein HchA7e-167586
NC_010498:1210145:122271212227121223563852Escherichia coli SMS-3-5, complete genomechaperone protein HchA2e-165581
NC_009800:2049346:205493520549352055786852Escherichia coli HS, complete genomechaperone protein HchA2e-165581
AP010958:2272919:227498722749872275838852Escherichia coli O103:H2 str. 12009 DNA, complete genomeHsp31 molecular chaperone2e-165581
NC_013353:2272919:227498722749872275838852Escherichia coli O103:H2 str. 12009, complete genomeHsp31 molecular chaperone2e-165581
NC_013364:2522888:252779425277942528645852Escherichia coli O111:H- str. 11128, complete genomeHsp31 molecular chaperone2e-165581
NC_016822:2201388:221242122124212213272852Shigella sonnei 53G, complete genomechaperone protein HchA2e-165581
NC_000913:2028472:203385920338592034710852Escherichia coli K12, complete genomechaperone protein HchA3e-165580
AC_000091:2027648:203797220379722038823852Escherichia coli W3110 DNA, complete genomeHsp31 molecular chaperone3e-165580
NC_010473:2119480:212486721248672125718852Escherichia coli str. K-12 substr. DH10B, complete genomeHsp31 molecular chaperone3e-165580
NC_012759:1920955:192634219263421927193852Escherichia coli BW2952 chromosome, complete genomechaperone protein HchA3e-165580
NC_012947:1769438:180065118006511801502852Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completechaperone protein HchA3e-165580
NC_011415:2248417:225377422537742254625852Escherichia coli SE11 chromosome, complete genomechaperone protein HchA8e-165579
NC_009801:2159123:216530121653012166152852Escherichia coli E24377A, complete genomechaperone protein HchA8e-165579
NC_016902:1902431:191775819177581918609852Escherichia coli KO11FL chromosome, complete genomeThiJ/PfpI domain-containing protein9e-165579
CP002516:1902431:191775819177581918609852Escherichia coli KO11, complete genomeThiJ/PfpI domain-containing protein9e-165579
CP002185:2181936:218724621872462188097852Escherichia coli W, complete genomeHSP31 molecular chaperone9e-165579
NC_002695:2655445:266037426603742661225852Escherichia coli O157:H7 str. Sakai, complete genomechaperone protein HchA1e-164578
NC_011353:2563056:256798525679852568836852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomechaperone protein HchA1e-164578
NC_013008:2561586:256696625669662567817852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomechaperone protein HchA1e-164578
NC_013941:2425233:243016224301622431013852Escherichia coli O55:H7 str. CB9615 chromosome, complete genomechaperone protein hchA1e-164578
NC_011741:2091249:209754120975412098392852Escherichia coli IAI1 chromosome, complete genomechaperone protein HchA4e-164577
CU928160:2091249:209754120975412098392852Escherichia coli IAI1 chromosome, complete genomeHsp31 molecular chaperone4e-164577
NC_002655:2730659:273558827355882736439852Escherichia coli O157:H7 EDL933, complete genomechaperone protein HchA7e-164576
NC_008563:2041345:204308520430852043936852Escherichia coli APEC O1, complete genomeheat shock protein (Hsp) 31, subunit of Hsp31 homodimer6e-164576
NC_004741:2009769:201462720146272015499873Shigella flexneri 2a str. 2457T, complete genomechaperone protein HchA3e-163574
NC_011740:1991941:199977119997712000622852Escherichia fergusonii ATCC 35469, complete genomeHsp31 molecular chaperone4e-146517
NC_012967:1967675:197402619740261974685660Escherichia coli B str. REL606 chromosome, complete genomechaperone protein HchA1e-121436
NC_013446:2961647:296505429650542965902849Comamonas testosteroni CNB-2, complete genomeThiJ/PfpI7e-101367
NC_012583:861225:879263879263880123861Vibrio cholerae O395 chromosome chromosome II, complete sequenceintracellular protease/amidase3e-98358
NC_009456:383819:383819383819384679861Vibrio cholerae O395 chromosome 1, complete sequencechaperone protein HchA3e-98358
NC_008027:2996947:301599330159933016847855Pseudomonas entomophila L48, complete genomehypothetical protein1e-97356
NC_008314:1465643:149339814933981494279882Ralstonia eutropha H16 chromosome 2, complete sequenceputative peptidase, C56 family3e-96351
NC_013508:2130681:216117821611782162086909Edwardsiella tarda EIB202, complete genomemolecular chaperone8e-96350
NC_010943:1884695:188791418879141888786873Stenotrophomonas maltophilia K279a, complete genomeputative heat shock chaperone protein3e-94344
NC_016027:2580477:258326225832622584131870Gluconacetobacter xylinus NBRC 3288, complete genomeprotease/amidase5e-82304
NC_016446:522936:541219541219541830612Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completemolecular chaperone HchA (Hsp31)2e-66252
NC_002506:822401:840439840439841298860Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete3e-1685.9
NC_015312:848403:8657128657128667311020Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-1067
NC_010125:2884762:293446229344622935244783Gluconacetobacter diazotrophicus PAl 5, complete genomeputative intracellular protease/amidase2e-1066.6
NC_010125:2813653:282770028277002828578879Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator2e-1066.6
NC_012779:2184927:218871121887112189073363Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-1065.1
NC_006361:1720031:174025417402541740949696Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-0860.8
NC_014307:2735934:275274827527482753437690Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein3e-0859.3
NC_013421:801542:820907820907821671765Pectobacterium wasabiae WPP163, complete genomeThiJ/PfpI domain protein4e-0858.9
NC_008391:2045348:205124420512442051957714Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein7e-0858.2
NC_010552:58294:919469194692659714Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein6e-0858.2
NC_021177:7815791:782297778229777823678702Streptomyces fulvissimus DSM 40593, complete genomeThiJ/PfpI domain-containing protein1e-0757.4
NC_020453:7826358:785114778511477851818672Agromonas oligotrophica S58 DNA, complete genomeputative intracellular protease/amidase5e-0755.1
NC_020181:1317647:133497513349751335655681Enterobacter aerogenes EA1509E, complete genomeThiJ/PfpI family protein2e-0653.5
NC_020450:1254849:127006112700611270738678Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeintracellular protease/amidase5e-0652
NC_014100:2782000:278520327852032786000798Caulobacter segnis ATCC 21756 chromosome, complete genomeThiJ/PfpI domain-containing protein9e-0650.8