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Query: NC_004307:579729 Bifidobacterium longum NCC2705, complete genome

Start: 579729, End: 609143, Length: 29415

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010816:62184962184964504823200Bifidobacterium longum DJO10A, complete genome08288BLASTN svgBLASTP svg
NC_015052:10948251094825112073125907Bifidobacterium longum subsp. infantis 157F, complete genome08153BLASTN svgBLASTP svg
NC_015067:998500998500102062722128Bifidobacterium longum subsp. longum JCM 1217, complete genome04666BLASTN svgBLASTP svg
NC_009089:38898113889811392148531675Clostridium difficile 630, complete genome3e-31145BLASTN svgBLASTP svg
NC_019892:1113114*1113114113750824395Singulisphaera acidiphila DSM 18658 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013714:1521404*1521404154642725024Bifidobacterium dentium Bd1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009089:3935500*3935500397916543666Clostridium difficile 630, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_007974:10078341007834103035922526Ralstonia metallidurans CH34 chromosome 2, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_012912:44281114428111445683228722Dickeya zeae Ech1591, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009921:41860004186000420611220113Frankia sp. EAN1pec, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015067:32500325005709924600Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014394:94201594201596663724623Gallionella capsiferriformans ES-2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg